Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30228
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    28   0.065
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.9  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   9.9  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -2

Query: 183 SSNAFRFEGWGGRCNYTESLQLISQGGWRI 94
           + N+ ++ G  G   Y E ++L  +GGW++
Sbjct: 284 AGNSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = -2

Query: 177 NAFRFEGWGGRCNYTESLQLISQGGW-RIYDVDDYRLY*PLNTRW 46
           +A R+ G  G   Y E ++  + GGW  ++D +    Y     +W
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGWTTVWDDEQKTPYMYKGNQW 334


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 458 HRDICRLCRLK 490
           HR+ CR CRLK
Sbjct: 88  HRNQCRACRLK 98


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 458 HRDICRLCRLK 490
           HR+ CR CRLK
Sbjct: 88  HRNQCRACRLK 98


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 618 RLNLFGIQLNDNQSFGL 668
           +LN+F   L D+QSF L
Sbjct: 268 KLNVFHWHLTDSQSFPL 284


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = -2

Query: 651  YRSIVCQTDLIAVCHEAF 598
            +  I+C  D+  +CH  +
Sbjct: 1000 FLGIICAADVFYICHVCY 1017


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 5/18 (27%), Positives = 10/18 (55%)
 Frame = -2

Query: 651 YRSIVCQTDLIAVCHEAF 598
           +  I+C  D+  +CH  +
Sbjct: 281 FLGIICAADVFYICHVCY 298


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 287 IAYNLFEVITKSIPNLMKIGSMVWQRIEDKH 379
           IA +L E I     + +K GSMV   I D H
Sbjct: 64  IARSLGEDIVTYSGHKLKAGSMVHLHIYDMH 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,236
Number of Sequences: 336
Number of extensions: 4136
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)