Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30226
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical pr...    76   2e-14
Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical pr...    51   8e-07
AF068718-4|AAC17765.1|   98|Caenorhabditis elegans Hypothetical ...    35   0.053
Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.      29   3.5  
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a...    28   6.1  
Z83127-1|CAB05630.1|  160|Caenorhabditis elegans Hypothetical pr...    28   8.1  
Z73969-14|CAA98240.1|  541|Caenorhabditis elegans Hypothetical p...    28   8.1  
AF072379-1|AAC62466.1|  541|Caenorhabditis elegans Akt/PKB serin...    28   8.1  
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ...    28   8.1  

>Z80223-7|CAB02316.2|  613|Caenorhabditis elegans Hypothetical
           protein F26D10.9a protein.
          Length = 613

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 29/58 (50%), Positives = 43/58 (74%)
 Frame = +3

Query: 255 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 428
           G+T+E++ KY +DPFW  +R  LFVLFW+AW+ M AGAIA++V +PKC   +   W++
Sbjct: 43  GLTKEQLEKYRNDPFWKPVRTILFVLFWLAWVLMFAGAIAIVVLSPKCAEKQKPDWWQ 100


>Z93375-4|CAB07562.2|  647|Caenorhabditis elegans Hypothetical
           protein C38C6.2 protein.
          Length = 647

 Score = 51.2 bits (117), Expect = 8e-07
 Identities = 20/58 (34%), Positives = 35/58 (60%)
 Frame = +3

Query: 255 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 428
           G++ +E+ ++ +DP W  +R  LFVLFW+ WL + A AI ++  +P C       W++
Sbjct: 78  GLSEQELEQFRNDPCWKFIRTVLFVLFWLIWLALFAVAILLVCFSPTCVLRAKPNWWQ 135


>AF068718-4|AAC17765.1|   98|Caenorhabditis elegans Hypothetical
           protein R01B10.3 protein.
          Length = 98

 Score = 35.1 bits (77), Expect = 0.053
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +3

Query: 255 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 383
           G + +E+    ++P W   R++   +FW  W  +LAG+I +IV
Sbjct: 35  GYSLDELNAKREEPKWRVARYTAIAMFWGIWGALLAGSILIIV 77


>Z81050-6|CAB02856.1|  713|Caenorhabditis elegans Hypothetical
           protein C50B6.7 protein.
          Length = 713

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = +2

Query: 533 QVPTYEVLDKRDTLDEFKILFNKIKKIGVRVIVDLIPNYV 652
           Q  +Y++  +     EF+ + N+  K+GVR+IVD++ N++
Sbjct: 85  QPVSYKLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNHM 124


>Z35639-7|CAA84697.3|  959|Caenorhabditis elegans Hypothetical
           protein D2045.1a protein.
          Length = 959

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 664 MVGEHVVRNQINNHSYSDLLNFVEQNFEF-VQCV 566
           M+G  ++ N  +   YS +L  V Q+F+F +QCV
Sbjct: 21  MIGRVIIINTTDKKRYSGVLGAVSQDFDFGMQCV 54


>AY571963-1|AAS78587.1|  959|Caenorhabditis elegans ATX-2 protein.
          Length = 959

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -3

Query: 664 MVGEHVVRNQINNHSYSDLLNFVEQNFEF-VQCV 566
           M+G  ++ N  +   YS +L  V Q+F+F +QCV
Sbjct: 21  MIGRVIIINTTDKKRYSGVLGAVSQDFDFGMQCV 54


>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 192 protein.
          Length = 2957

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = -2

Query: 365 PGEHAQPGHPEQHEQR---PTQVHPER 294
           P +  QP HP QH+Q    P Q HP++
Sbjct: 520 PQQQQQPQHPHQHQQPASVPMQHHPQQ 546


>Z83127-1|CAB05630.1|  160|Caenorhabditis elegans Hypothetical
           protein T23F6.1 protein.
          Length = 160

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 310 CVGRCSCCSGWPGCACSPGLLQSLYALPSAARP 408
           C G   CC G  GC C    +      PSA  P
Sbjct: 53  CGGMGGCCGGMSGCGCGSMGMCGQTCCPSAPPP 85


>Z73969-14|CAA98240.1|  541|Caenorhabditis elegans Hypothetical
           protein C12D8.10a protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +3

Query: 252 HGMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGP-PEPR 416
           H +T   VL+    PF   L++S     ++ ++   A    +     KCG   EPR
Sbjct: 237 HTLTENRVLQRCKHPFLTELKYSFQEQHYLCFVMQFANGGELFTHVRKCGTFSEPR 292


>AF072379-1|AAC62466.1|  541|Caenorhabditis elegans Akt/PKB
           serine/threonine kinase protein.
          Length = 541

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +3

Query: 252 HGMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGP-PEPR 416
           H +T   VL+    PF   L++S     ++ ++   A    +     KCG   EPR
Sbjct: 237 HTLTENRVLQRCKHPFLTELKYSFQEQHYLCFVMQFANGGELFTHVRKCGTFSEPR 292


>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
           protein H43E16.1 protein.
          Length = 1203

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = -3

Query: 451 SSPTRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFST 272
           SS T G SS   + S   + G+ T    A  +  S +TQ N+N+     T        ST
Sbjct: 811 SSSTYGASSTEPIASSTANPGSSTSGQTAVTTQGSSSTQTNSNTGSTGSTVTNPPVSSST 870

Query: 271 S 269
           S
Sbjct: 871 S 871


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,782,117
Number of Sequences: 27780
Number of extensions: 324991
Number of successful extensions: 1380
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)