Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30224X
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    21   6.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.0  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 258 VIYYIYSVRNLIFDVCTSKT*IKFMK 181
           +IY + S+RN+  DV      ++ +K
Sbjct: 8   IIYELDSIRNIFSDVLEESQTLEILK 33


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 258 VIYYIYSVRNLIFDVCTSKT*IKFMK 181
           +IY + S+RN+  DV      ++ +K
Sbjct: 68  IIYELDSIRNIFSDVLEESQTLEILK 93


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -3

Query: 258 VIYYIYSVRNLIFDVCTSKT*IKFMK 181
           +IY + S+RN+  DV      ++ +K
Sbjct: 68  IIYELDSIRNIFSDVLEESQTLEILK 93


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 168 VRCYFS*TLFTFCWYIRQI*GFVLNKYNI 254
           VRC     +F   WY R I G + +  N+
Sbjct: 79  VRCQDQILIFLVNWYPRLIIGIMNSTLNL 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,076
Number of Sequences: 336
Number of extensions: 2050
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)