BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30223 (502 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical pr... 36 0.022 Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical pr... 30 0.82 AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical ... 29 1.4 U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical pr... 27 5.8 Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical pr... 27 7.6 U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical pr... 27 7.6 U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical pr... 27 7.6 >Z81128-2|CAB03397.2| 232|Caenorhabditis elegans Hypothetical protein T23D8.2 protein. Length = 232 Score = 35.5 bits (78), Expect = 0.022 Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = +3 Query: 105 EAVFSELQRQFECCGNTGAINYGQF-TLPESCCVKK 209 E+ + + + FECCG T + ++ F T+P+SCC+++ Sbjct: 132 ESAWDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE 167 Score = 33.1 bits (72), Expect = 0.12 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +2 Query: 260 PGCGPKIGELYQKWNKPIAGVALGVACIEVVGALFALCLANSI 388 PGC + + K + G+ +A I++VG FA CL+ SI Sbjct: 181 PGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223 >Z75531-4|CAA99805.1| 408|Caenorhabditis elegans Hypothetical protein C54D10.4 protein. Length = 408 Score = 30.3 bits (65), Expect = 0.82 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +3 Query: 111 VFSELQRQFECCGNTGAINYGQF 179 + +QR++ CCG GAI+YG F Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298 >AL132948-5|CAC51071.1| 321|Caenorhabditis elegans Hypothetical protein Y39B6A.6 protein. Length = 321 Score = 29.5 bits (63), Expect = 1.4 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%) Frame = +3 Query: 123 LQRQFECCGNTGAINYGQF--TLPESCCVK 206 LQ F CCGN G ++ F +P SC ++ Sbjct: 200 LQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229 >U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical protein K11G9.1 protein. Length = 565 Score = 27.5 bits (58), Expect = 5.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 221 YLRRQQLHGRRPNPGCGPKIGELYQKWNKPIAG 319 YL+ + L G N CGP +G LY+ +K + G Sbjct: 7 YLKPEPL-GTVLNTSCGPVLGNLYRHGDKEVHG 38 >Z68218-2|CAA92472.1| 313|Caenorhabditis elegans Hypothetical protein K01H12.2 protein. Length = 313 Score = 27.1 bits (57), Expect = 7.6 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 328 ESNAGYRLVPFLVELADLGTAAGIRASTVQLLPAKVERMLFLTQ-QDS 188 E G+ FL++LA GTAA + + V A +ER+ L Q QD+ Sbjct: 15 EDKKGFDTRKFLIDLASGGTAAAVSKTAV----APIERVKLLLQVQDA 58 >U80931-5|AAB38001.1| 313|Caenorhabditis elegans Hypothetical protein T01B11.4 protein. Length = 313 Score = 27.1 bits (57), Expect = 7.6 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = -1 Query: 328 ESNAGYRLVPFLVELADLGTAAGIRASTVQLLPAKVERMLFLTQ-QDS 188 E G+ FL++LA GTAA + + V A +ER+ L Q QD+ Sbjct: 15 EDKKGFDTRKFLIDLASGGTAAAVSKTAV----APIERVKLLLQVQDA 58 >U52003-7|AAM97989.1| 555|Caenorhabditis elegans Hypothetical protein ZK381.5a protein. Length = 555 Score = 27.1 bits (57), Expect = 7.6 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +3 Query: 81 DANADEAAEAVFSELQRQFECCGNTGAINYGQFTLPESCCVKK 209 D NA+EA E R+ EC G +G + Y F C K+ Sbjct: 114 DLNAEEADTLRMFERTRKTECLG-SGVVQYAPFDTKCEKCPKR 155 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,881,842 Number of Sequences: 27780 Number of extensions: 182028 Number of successful extensions: 528 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 500 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 527 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 956602620 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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