Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30221
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99600-1|CAA67914.1| 91|Caenorhabditis elegans ubiquitin-like ... 55 5e-08
U94830-1|AAB67608.1| 91|Caenorhabditis elegans ubiquitin-like ... 55 5e-08
AF043701-6|AAK18969.1| 91|Caenorhabditis elegans Sumo (ubiquit... 55 5e-08
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.1
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 29 3.1
AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical... 29 4.1
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 7.1
>X99600-1|CAA67914.1| 91|Caenorhabditis elegans ubiquitin-like
protein protein.
Length = 91
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 513 VRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 620
+RF FDG+ IN++DTP +LEME+ D IEVYQ+Q GG
Sbjct: 55 LRFLFDGRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +1
Query: 361 MADE--KKGEN-EHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSM 507
MAD+ + G+N E+I +KV+GQD+ V F++K T + KL +Y DR G+++
Sbjct: 1 MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAV 52
>U94830-1|AAB67608.1| 91|Caenorhabditis elegans ubiquitin-like
protein protein.
Length = 91
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 513 VRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 620
+RF FDG+ IN++DTP +LEME+ D IEVYQ+Q GG
Sbjct: 55 LRFLFDGRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +1
Query: 361 MADE--KKGEN-EHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSM 507
MAD+ + G+N E+I +KV+GQD+ V F++K T + KL +Y DR G+++
Sbjct: 1 MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAV 52
>AF043701-6|AAK18969.1| 91|Caenorhabditis elegans Sumo
(ubiquitin-related) homologprotein 1 protein.
Length = 91
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 513 VRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 620
+RF FDG+ IN++DTP +LEME+ D IEVYQ+Q GG
Sbjct: 55 LRFLFDGRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/52 (42%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Frame = +1
Query: 361 MADE--KKGEN-EHINLKVLGQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSM 507
MAD+ + G+N E+I +KV+GQD+ V F++K T + KL +Y DR G+++
Sbjct: 1 MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAV 52
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 231 KSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSE 58
++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 823 RAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDF 882
Query: 57 DKAFKKFVLCFFNK 16
+K F KF+L N+
Sbjct: 883 EKRFVKFLLELSNQ 896
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 231 KSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSE 58
++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 823 RAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDF 882
Query: 57 DKAFKKFVLCFFNK 16
+K F KF+L N+
Sbjct: 883 EKRFVKFLLELSNQ 896
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical protein
C10C5.6b protein.
Length = 1782
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 231 KSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSE 58
++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 823 RAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDF 882
Query: 57 DKAFKKFVLCFFNK 16
+K F KF+L N+
Sbjct: 883 EKRFVKFLLELSNQ 896
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical protein
C10C5.6a protein.
Length = 1776
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 231 KSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSE 58
++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 823 RAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDF 882
Query: 57 DKAFKKFVLCFFNK 16
+K F KF+L N+
Sbjct: 883 EKRFVKFLLELSNQ 896
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 231 KSVVLICLAFAVFNCGADNVHLTETQKEKAKQYTSECVKESG--VSTEVINAAKTGQYSE 58
++ + L + N N H + ++ A + S+CV +S V E+I A + +
Sbjct: 847 RAAAVFALGSLLRNSSRSNEHASAVEENLAGELCSQCVFDSSVLVREELIVALQWFVFDF 906
Query: 57 DKAFKKFVLCFFNK 16
+K F KF+L N+
Sbjct: 907 EKRFVKFLLELSNQ 920
>AL117202-22|CAB57900.1| 691|Caenorhabditis elegans Hypothetical
protein Y47D3A.28 protein.
Length = 691
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 171 HLTETQ-KEKAKQYTSECVKESGVSTEVINAAK-TGQYSEDKAFKK 40
HLT + +EK + +T+ CV+ V N K T Q++ + KK
Sbjct: 574 HLTGMEEREKVETFTTTCVEVKNVKVVTCNQCKYTSQFASSECIKK 619
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 31 KHEFLKSFIFGVLSSLRCIYHF 96
K+EFLKS I L +L C+ HF
Sbjct: 231 KNEFLKSHIHSKLRNLMCMLHF 252
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 126 ECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAIL 4
+CV SGV E + A+T S F KF+ F++++ L
Sbjct: 203 DCVVTSGVLLEAMGNARTTHNSNSSRFGKFIRIEFDENSKL 243
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,970,413
Number of Sequences: 27780
Number of extensions: 359215
Number of successful extensions: 901
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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