Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30221
         (828 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              33   0.002
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   6.0  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   8.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   8.0  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   8.0  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 33.5 bits (73), Expect = 0.002
 Identities = 12/51 (23%), Positives = 27/51 (52%)
 Frame = -1

Query: 153 KEKAKQYTSECVKESGVSTEVINAAKTGQYSEDKAFKKFVLCFFNKSAILN 1
           +E   +Y  +C+ E+  + E + A + G++ ED+  K +  C   K  +++
Sbjct: 33  REMTSKYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNCVLEKFNVMD 83


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 525 FDGQPINENDTPTSLEM 575
           FDG  I EN+ P  LE+
Sbjct: 178 FDGDFITENNLPLGLEV 194


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 204 FAVFNCGADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQY 64
           F+++    D  H     KE   +YT+E +   GVS E +   K   Y
Sbjct: 418 FSIYKTILDYYH---KYKENLPKYTTEELNFPGVSIESVTVDKLITY 461


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 204 FAVFNCGADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQY 64
           F+++    D  H     KE   +YT+E +   GVS E +   K   Y
Sbjct: 418 FSIYKTILDYYH---KYKENLPKYTTEELNFPGVSIESVTVDKLITY 461


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -1

Query: 204 FAVFNCGADNVHLTETQKEKAKQYTSECVKESGVSTEVINAAKTGQY 64
           F+++    D  H     KE   +YT+E +   GVS E +   K   Y
Sbjct: 44  FSIYKTILDYYH---KYKENLPKYTTEELNFPGVSIESVTVDKLITY 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,777
Number of Sequences: 438
Number of extensions: 4039
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)