Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30217
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   3.9  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.8  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 114 PSRSSAERCGTTTGSPCWSPSRQRDWSTSSDRRPRHKNGQSKLHQSQS 257
           P     E+   TT +PC SP+R+ D +    RR      +S L  S++
Sbjct: 117 PKSEKEEKDMETTLTPCASPNRKPDDNQDHLRRLEMSLEKSGLFSSKT 164


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 583 LVSPFTYAALYRVPLFEYSG 524
           LVSPF  A  +R P F + G
Sbjct: 203 LVSPFLAAMAHRPPHFAFPG 222


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 171 PSRQRDWSTSSDRRPRHKNGQSKLHQSQSENEQENYN 281
           P+   D  ++    P  ++  S + Q+  +N+Q N+N
Sbjct: 203 PTEDCDVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFN 239


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 87   AR*SKMTT*PSRSSAERCGTTTGSPCWSPS 176
            A+ ++ TT  S +++   G+TT  P W P+
Sbjct: 1343 AKPAQSTTSVSTTTSWNPGSTTNYPEWQPT 1372


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 765 LTELYRLVYRCPST 806
           + E+Y LVY C ST
Sbjct: 300 VVEIYLLVYACAST 313


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 765 LTELYRLVYRCPST 806
           + E+Y LVY C ST
Sbjct: 300 VVEIYLLVYACAST 313


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,060
Number of Sequences: 336
Number of extensions: 3912
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)