Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30217
(823 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 73 4e-13
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_4156| Best HMM Match : Ets (HMM E-Value=0) 62 5e-10
SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_34495| Best HMM Match : Ets (HMM E-Value=0) 59 5e-09
SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_40652| Best HMM Match : Ets (HMM E-Value=0) 56 3e-08
SB_7150| Best HMM Match : Ets (HMM E-Value=2e-38) 56 5e-08
SB_31522| Best HMM Match : Ets (HMM E-Value=3.3e-25) 51 1e-06
SB_19675| Best HMM Match : Ets (HMM E-Value=1.2e-25) 49 4e-06
SB_46246| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_8499| Best HMM Match : DUF229 (HMM E-Value=0) 31 0.85
SB_27323| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_54650| Best HMM Match : IncA (HMM E-Value=0.84) 29 3.4
SB_12140| Best HMM Match : ATP-synt_F (HMM E-Value=0.21) 29 3.4
SB_24208| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_472| Best HMM Match : Cas1p (HMM E-Value=0) 29 4.6
SB_35407| Best HMM Match : PKD (HMM E-Value=1.8e-11) 29 6.0
SB_28026| Best HMM Match : ATP-synt_F (HMM E-Value=1.5) 29 6.0
SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38) 29 6.0
SB_58395| Best HMM Match : IncA (HMM E-Value=3.7) 28 8.0
SB_40355| Best HMM Match : IncA (HMM E-Value=0.62) 28 8.0
SB_39087| Best HMM Match : ATP-synt_DE_N (HMM E-Value=4.1) 28 8.0
SB_27940| Best HMM Match : IncA (HMM E-Value=0.41) 28 8.0
SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051) 28 8.0
SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2
Query: 5 CPSIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTA 184
CP I W G FR V VAKLWG+ K NM +EK SRA+RY+Y + +L VP
Sbjct: 551 CPRYITWISREEGVFRLVNSGAVAKLWGQRKNRRNMNYEKMSRALRYYYERHILERVPGQ 610
Query: 185 RLVYQF 202
RL+Y+F
Sbjct: 611 RLIYKF 616
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/66 (48%), Positives = 40/66 (60%)
Frame = +2
Query: 5 CPSIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTA 184
CP I W G FR V VAKLWG+ K NM +EK SRA+RY+Y + +L VP
Sbjct: 897 CPRYITWISREEGVFRLVNSGAVAKLWGQRKNRRNMNYEKMSRALRYYYERHILERVPGQ 956
Query: 185 RLVYQF 202
RL+Y+F
Sbjct: 957 RLIYKF 962
>SB_4156| Best HMM Match : Ets (HMM E-Value=0)
Length = 516
Score = 62.1 bits (144), Expect = 5e-10
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +2
Query: 17 IKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTARLVY 196
I WE G+F+ V PDEVA+ WG+ K NM ++K SRA+RY+Y ++++ + R Y
Sbjct: 376 IAWEG-TNGEFKLVDPDEVARRWGERKNKPNMNYDKLSRALRYYYDKNIMTKIHGKRYAY 434
Query: 197 QF 202
++
Sbjct: 435 KY 436
>SB_28841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 400
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = +2
Query: 5 CPSIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTA 184
C S I W L +F+ + P+EVA+ WG K M ++K SR++RY+Y + ++ V
Sbjct: 260 CSSFIAWTGRGL-EFKLIDPEEVARRWGLQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGE 318
Query: 185 RLVYQF 202
R VY+F
Sbjct: 319 RYVYKF 324
>SB_34495| Best HMM Match : Ets (HMM E-Value=0)
Length = 476
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Frame = +2
Query: 5 CPS---IIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSV 175
CP +I+W +F+ + P +A +WGK K NM +EK SR +RY+Y ++++ V
Sbjct: 248 CPQSQRLIEWTYDEKFEFKLLNPPVIATMWGKRKNKPNMNYEKLSRGLRYYYDKNIIDKV 307
Query: 176 PTARLVYQF 202
R VYQF
Sbjct: 308 HGKRYVYQF 316
>SB_13976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 763
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +2
Query: 2 YCPSIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVL 166
Y P I W G FR V VA+LWG+ K +MT+EK SRA+RY+Y + ++
Sbjct: 547 YSPKFITWVSRDDGMFRLVDSKAVARLWGQRKNRHDMTYEKMSRAIRYYYERKII 601
>SB_40652| Best HMM Match : Ets (HMM E-Value=0)
Length = 120
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 5 CPSIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTA 184
C +I W G+F+ P++VA+ WGK K M +EK SRA+RY+Y ++ V
Sbjct: 21 CRHLIMWVGEE-GEFKLNDPEQVAQQWGKRKNKPAMNYEKLSRALRYYYDGDMIHKVHGK 79
Query: 185 RLVYQF 202
R VY+F
Sbjct: 80 RFVYKF 85
>SB_7150| Best HMM Match : Ets (HMM E-Value=2e-38)
Length = 188
Score = 55.6 bits (128), Expect = 5e-08
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +2
Query: 11 SIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSV 175
S+I W G+F+ +EVAK WG +K M +EK SRA+RY+Y+Q ++ +
Sbjct: 46 SLIAWSRKEYGEFKLKNQEEVAKRWGILKHRAGMNYEKLSRAIRYYYQQGIIKKI 100
>SB_31522| Best HMM Match : Ets (HMM E-Value=3.3e-25)
Length = 79
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +2
Query: 14 IIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTARLV 193
+I+W D G F+F+ +VA+ WG+ + M +E F+R++R + + +L P ++LV
Sbjct: 15 LIEWVDEEKGIFKFINSTKVAREWGERRNKPFMKYENFARSLRTYIAKGILTK-PRSKLV 73
Query: 194 YQF 202
Y+F
Sbjct: 74 YRF 76
>SB_19675| Best HMM Match : Ets (HMM E-Value=1.2e-25)
Length = 139
Score = 49.2 bits (112), Expect = 4e-06
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +2
Query: 14 IIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMRYHYRQSVLVSVPTAR 187
II W + G+F+ + P+ VA+ WG MT++ SRA+R+ Y + ++ VP+++
Sbjct: 55 IISWTNGQPGEFKLLGPEAVARKWGDQTGKQKMTYKIMSRALRHSYAKGIISKVPSSK 112
>SB_46246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 46.4 bits (105), Expect = 3e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 11 SIIKWEDYALGKFRFVKPDEVAKLWGKMKQNDNMTFEKFSRAMR 142
SII W + G+F+ + +EVA+ WG +K M ++K SRA+R
Sbjct: 30 SIISWTNRESGEFKLLNQEEVARRWGHLKHRPGMNYDKLSRALR 73
>SB_8499| Best HMM Match : DUF229 (HMM E-Value=0)
Length = 926
Score = 31.5 bits (68), Expect = 0.85
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 17 IKWEDYALGKFRFVKPDEVAKLWGKMKQ 100
I W++ G FR V + VAKLWGK K+
Sbjct: 69 IAWQNPQKGIFRMVDHNGVAKLWGKHKK 96
>SB_27323| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSGRRPARTAGSGTASL 132
K +L + + V V I L GL VF+SG V G P++ ++G AG+G S
Sbjct: 66 KRALAVTHTVSVASGIAAGALSGAGLGVFLSGIGVLIGAPLAGVAGLVGVVGAGAGVVSR 125
Query: 131 G*TSR 117
G TS+
Sbjct: 126 GLTSK 130
>SB_54650| Best HMM Match : IncA (HMM E-Value=0.84)
Length = 291
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -3
Query: 350 ILSINNIDVAQHLPKTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSG 174
I+++++ + + K + + +AV V I L GL V +SG V G P++ ++G
Sbjct: 53 IIALSHYRLVRKKYKRAFAVTHAVSVASGIAAGVLSSAGLGVSLSGIGVLIGAPLAGVAG 112
Query: 173 RRPARTAGSGTASLG*TSR 117
AG+G S G TS+
Sbjct: 113 LIGVVGAGAGVVSRGLTSK 131
>SB_12140| Best HMM Match : ATP-synt_F (HMM E-Value=0.21)
Length = 271
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSGRRPARTAGSGTASL 132
K + + +AV V I L G+ VF+SG V G P++ ++G AG+G S
Sbjct: 112 KRAFAVTHAVSVASGIAAGALSSAGVGVFLSGIGVLIGAPLAGVAGLVGIVGAGAGVVSR 171
Query: 131 G*TSR 117
G TS+
Sbjct: 172 GLTSK 176
>SB_24208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -3
Query: 350 ILSINNIDVAQHLPKTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSG 213
IL I V HL K S+ + +V V I +TL+ +GLS+F G
Sbjct: 126 ILIIATFAVNAHLRKRSVYLLLSVSVADMIVGVTLVTYGLSIFYEG 171
>SB_472| Best HMM Match : Cas1p (HMM E-Value=0)
Length = 932
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 693 DVSIYRLNKIVQISSFLPIISHSYLTELYRLVYRCP 800
D S+YR+ K++ +FL +I+ T Y L Y CP
Sbjct: 620 DFSLYRMLKMLFRLNFLVVITCIVTTNEYMLYYICP 655
>SB_35407| Best HMM Match : PKD (HMM E-Value=1.8e-11)
Length = 159
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -1
Query: 607 TSDIESLTLVSPFTYAALYRVPLFEYSGTSSDNSRNLNWRVTVFEDSNRNWCINKREYQY 428
TS + T+V + Y V L ++ N+ N +T+ + N N+C Y Y
Sbjct: 97 TSTLAEPTVV--YNTPGTYNVQLTVTGKNNNTNNATKNNYITIHQKPNLNYCAANVSYDY 154
Query: 427 INI 419
NI
Sbjct: 155 TNI 157
>SB_28026| Best HMM Match : ATP-synt_F (HMM E-Value=1.5)
Length = 171
Score = 28.7 bits (61), Expect = 6.0
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = -3
Query: 338 NNIDVAQHLPKTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSGRRPA 162
N I + + K + + +AV V I L GL V +SG V G P++ + G
Sbjct: 2 NEITHYRQVRKRAFAVTHAVSVASGIAAGALSSAGLGVSLSGIGVLIGAPLAGVDGLVGV 61
Query: 161 RTAGSGTASLG*TSR 117
AG+G S G TS+
Sbjct: 62 VGAGAGVISRGLTSK 76
>SB_20303| Best HMM Match : Trans_reg_C (HMM E-Value=0.38)
Length = 1354
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +2
Query: 65 DEVAKLWGKMKQN---DNMTFEKFSRAMRYHYRQSVLVSVPTARLVYQFGPKAP 217
+++ LWGK++Q ++ T +R H R VL + A L Y F + P
Sbjct: 1227 EQITSLWGKVRQYAGVESATAHPSPWLLRRHLRSKVLPFLRCAALFYHFLTEIP 1280
>SB_58395| Best HMM Match : IncA (HMM E-Value=3.7)
Length = 165
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSGRRPARTAGSGTASL 132
K + + +AV V I L GL V +SG V G P++ ++G AG+G S
Sbjct: 6 KRAFAVTHAVSVASGIAAGALSSAGLGVSLSGIGVLIGAPLAGVAGLVGVLGAGAGVVSR 65
Query: 131 G*TSR 117
G TS+
Sbjct: 66 GLTSK 70
>SB_40355| Best HMM Match : IncA (HMM E-Value=0.62)
Length = 225
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSGRRPARTAGSGTASL 132
K + + +AV V I L GL V +SG V G P++ ++G AG+G S
Sbjct: 66 KRAFAVTHAVSVASGIVAGVLSSAGLGVSLSGIGVLIGAPLAGVAGLVVVVGAGAGVVSR 125
Query: 131 G*TSR 117
G TS+
Sbjct: 126 GLTSK 130
>SB_39087| Best HMM Match : ATP-synt_DE_N (HMM E-Value=4.1)
Length = 171
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVSLSGRRPART-AGSGTASL 132
K + + NAV V I L GL V +SG V G P++ R AG+G S
Sbjct: 67 KRAFAVTNAVSVASGIAAGALSSAGLGVSLSGIGVLIGAPLAGVARLVGVVGAGAGVVSR 126
Query: 131 G*TSR 117
G TS+
Sbjct: 127 GLTSK 131
>SB_27940| Best HMM Match : IncA (HMM E-Value=0.41)
Length = 418
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSGRRPARTAGSGTASL 132
K + + +AV V I L GL V +SG V G P++ ++G AG+G S
Sbjct: 259 KRAFAVTHAVSVASGIVAGVLSSAGLGVSLSGIGVLIGAPLAGVAGLVGVVGAGAGVVSR 318
Query: 131 G*TSR 117
G TS+
Sbjct: 319 GLTSK 323
>SB_27885| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.051)
Length = 421
Score = 28.3 bits (60), Expect = 8.0
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVSLSGRRPART-AGSGTASL 132
K + + NAV V I L GL V +SG V G P++ R AG+G S
Sbjct: 67 KRAFAVTNAVSVASGIAAGALSSAGLGVSLSGIGVLIGAPLAGVARLVGVVGAGAGVVSR 126
Query: 131 G*TSR 117
G TS+
Sbjct: 127 GLTSK 131
>SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 28.3 bits (60), Expect = 8.0
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = -3
Query: 308 KTSLTIQNAVIVFLFIF*LTLMKFGLSVFMSGPSVRTGRPVS-LSGRRPARTAGSGTASL 132
K + + +AV V I L GL V +SG V G P++ ++G AG+G S
Sbjct: 259 KRAFAVTHAVSVASGIVAGVLSSAGLGVSLSGIGVLIGAPLAGVAGLVGVVGAGAGVVSR 318
Query: 131 G*TSR 117
G TS+
Sbjct: 319 GLTSK 323
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,390,115
Number of Sequences: 59808
Number of extensions: 495284
Number of successful extensions: 1279
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2299585728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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