Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30215
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20792| Best HMM Match : SHMT (HMM E-Value=0) 79 4e-15
SB_56805| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_51400| Best HMM Match : Kinesin (HMM E-Value=0) 32 0.49
SB_39336| Best HMM Match : Kinesin (HMM E-Value=0) 31 0.65
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 30 1.5
SB_58726| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_45619| Best HMM Match : M (HMM E-Value=0.01) 30 2.0
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11) 29 4.6
SB_14805| Best HMM Match : DUF964 (HMM E-Value=0.22) 29 4.6
SB_15863| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_20792| Best HMM Match : SHMT (HMM E-Value=0)
Length = 252
Score = 78.6 bits (185), Expect = 4e-15
Identities = 36/67 (53%), Positives = 45/67 (67%)
Frame = +3
Query: 54 ALCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGDIGAL 233
A+ E + RGY + T GTD HL L+DLR G+ GA AER+LE S+ NKNT PGD AL
Sbjct: 108 AMAEVFMERGYKLVTDGTDNHLVLMDLRPKGIGGAQAERILEEISITVNKNTCPGDKSAL 167
Query: 234 NPSGIRL 254
P G+R+
Sbjct: 168 KPGGLRI 174
Score = 71.3 bits (167), Expect = 7e-13
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = +2
Query: 260 PALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLVDFNKAIE--ENAEFKKKIENL 433
PALT+R K D V DFIDR +K GLEI +V+G DF K IE + +F +K+E+L
Sbjct: 177 PALTSRKFKVHDFKQVADFIDRGIKLGLEIQEVAG---TDFKKFIEALSSEKFSEKVESL 233
Query: 434 KEEVENYSKSFPLPGFD 484
++EVE +S FP+PG D
Sbjct: 234 RKEVEKFSGKFPMPGRD 250
>SB_56805| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 260 PALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLV 376
PALT+R KE D VV++IDR + L+ + +G++ +
Sbjct: 3 PALTSRNFKEQDFVRVVEYIDRGVHIALDAQESTGIEFL 41
>SB_51400| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 455
Score = 31.9 bits (69), Expect = 0.49
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +2
Query: 197 QQEHRARRHWRAQPQRHQTRT--PALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLK 370
Q+ + ++ R + H T T ++ L E+ I+ V D + R L L+ I+
Sbjct: 359 QEYQKEIKNLRKELAMHDTLTNRSQISYEPLSESQIEDVKDQVKRFLSGDLDDIE----- 413
Query: 371 LVDFNKAIEENAEFKKKIENLKEEVENYSK 460
LV+ + E A+F+K + +++EEVE K
Sbjct: 414 LVNMRQIKETFAQFRKIVNSMEEEVEERVK 443
>SB_39336| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 558
Score = 31.5 bits (68), Expect = 0.65
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 197 QQEHRARRHWRAQPQRHQTRT--PALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLK 370
Q+ + ++ R + H T T ++ L E+ I+ V D + R L L+ I+
Sbjct: 359 QEYQKEIKNLRKELAMHDTLTNRSQISYEPLSESQIEDVKDQVKRFLSGDLDDIE----- 413
Query: 371 LVDFNKAIEENAEFKKKIENLKEEVE 448
LV+ + E A+F+K + +++EEVE
Sbjct: 414 LVNMRQIKETFAQFRKIVNSMEEEVE 439
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 326 ALKXGLEIIKVSGLKLVDFNKAIEENAEFKKKIENLKEEVEN 451
ALK LE K LKL ++ K EEN + I L++EV++
Sbjct: 559 ALKADLERAKYDNLKLANYRK--EENDRLNETIRTLQDEVKS 598
>SB_58726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 239 QRHQTRTPALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLVDFNKAIEEN-AEFK 415
+ H P G +E D +VD + + + G ++ + SG+KLV + + +N E
Sbjct: 158 KNHFDEHPLFEPVGDEEVASDPIVDKLYDSTEEGQKVTRNSGIKLVSVYRRMSDNFTESI 217
Query: 416 KKIENLK 436
+K+E LK
Sbjct: 218 RKLECLK 224
>SB_45619| Best HMM Match : M (HMM E-Value=0.01)
Length = 1315
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 377 DFNKAIEENAEFKKKIENLKEE 442
D N E+NA +K+ ENLKEE
Sbjct: 589 DVNNLTEDNARLRKRCENLKEE 610
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 371 LVDFNKAIEENAEFKKKIENLKEEVENYSKSFPLP 475
L++ K E ++K+I K++V+NYSK + P
Sbjct: 1526 LMEKEKLKESMLHYQKRILKFKDDVQNYSKEYTSP 1560
>SB_55307| Best HMM Match : HEAT (HMM E-Value=2.4e-11)
Length = 1552
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 557 KILFSAMQFIYFFKC*M*QYLESRIPYFD*SFT 655
K+LFS + IY F C LE R+ +D SFT
Sbjct: 1400 KLLFSTIDPIYDFHCAFLSELEERMTLWDQSFT 1432
>SB_14805| Best HMM Match : DUF964 (HMM E-Value=0.22)
Length = 628
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 200 QEHRARRHWRAQPQRHQTRTPALTTRGLKEADIDIVVDFIDRALKXGL-EIIKVSGLKLV 376
QEHRA+RH A+ Q +TR + +A ++ + + L+ G+ E++ + ++V
Sbjct: 32 QEHRAKRHREARKGSMQKEEHVTSTRYVGQA-VECLAQAVQIGLRIGMRELVAKAAYEIV 90
Query: 377 D 379
+
Sbjct: 91 E 91
>SB_15863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 922
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 320 DRALKXGLEIIKVSGLKLVDFNKAIEENAEFKKK 421
D+ L+ L+IIK SGLKL NK E EF+KK
Sbjct: 287 DKGLRETLKIIKESGLKL---NK---EKCEFRKK 314
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,948,269
Number of Sequences: 59808
Number of extensions: 242031
Number of successful extensions: 3795
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3793
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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