Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30215
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011432-1|AAR99090.1|  537|Drosophila melanogaster RH67089p pro...   108   6e-24
AE014298-819|AAF46101.1|  537|Drosophila melanogaster CG3011-PA ...   108   6e-24
AY118914-1|AAM50774.1|  273|Drosophila melanogaster LD21828p pro...    30   2.5  
AE014134-1269|AAN10629.1|  273|Drosophila melanogaster CG5171-PB...    30   2.5  
AE014134-1268|AAF52509.1|  273|Drosophila melanogaster CG5171-PA...    30   2.5  
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz...    30   3.3  
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz...    30   3.3  
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB...    30   3.3  
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE...    30   3.3  
AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC ...    29   7.7  

>BT011432-1|AAR99090.1|  537|Drosophila melanogaster RH67089p
           protein.
          Length = 537

 Score =  108 bits (260), Expect = 6e-24
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = +3

Query: 42  KERAALCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGD 221
           K   ALC+GLISRGY +ATGGTDVHL LVD+R  GL GA AE +LE   +ACNKNTVPGD
Sbjct: 387 KNAKALCDGLISRGYQVATGGTDVHLVLVDVRKAGLTGAKAEYILEEVGIACNKNTVPGD 446

Query: 222 IGALNPSGIRL 254
             A+NPSGIRL
Sbjct: 447 KSAMNPSGIRL 457



 Score = 82.6 bits (195), Expect = 4e-16
 Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +2

Query: 257 TPALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGL-KLVDFNKAIEENAEFKKKIENL 433
           TPALTTRGL E DI+ VV FID ALK G++  K++G  K+ D++K + EN E K +++ +
Sbjct: 459 TPALTTRGLAEQDIEQVVAFIDAALKVGVQAAKLAGSPKITDYHKTLAENVELKAQVDEI 518

Query: 434 KEEVENYSKSFPLPGFD 484
           ++ V  +S+ FPLPG +
Sbjct: 519 RKNVAQFSRKFPLPGLE 535


>AE014298-819|AAF46101.1|  537|Drosophila melanogaster CG3011-PA
           protein.
          Length = 537

 Score =  108 bits (260), Expect = 6e-24
 Identities = 50/71 (70%), Positives = 56/71 (78%)
 Frame = +3

Query: 42  KERAALCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGD 221
           K   ALC+GLISRGY +ATGGTDVHL LVD+R  GL GA AE +LE   +ACNKNTVPGD
Sbjct: 387 KNAKALCDGLISRGYQVATGGTDVHLVLVDVRKAGLTGAKAEYILEEVGIACNKNTVPGD 446

Query: 222 IGALNPSGIRL 254
             A+NPSGIRL
Sbjct: 447 KSAMNPSGIRL 457



 Score = 82.6 bits (195), Expect = 4e-16
 Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +2

Query: 257 TPALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGL-KLVDFNKAIEENAEFKKKIENL 433
           TPALTTRGL E DI+ VV FID ALK G++  K++G  K+ D++K + EN E K +++ +
Sbjct: 459 TPALTTRGLAEQDIEQVVAFIDAALKVGVQAAKLAGSPKITDYHKTLAENVELKAQVDEI 518

Query: 434 KEEVENYSKSFPLPGFD 484
           ++ V  +S+ FPLPG +
Sbjct: 519 RKNVAQFSRKFPLPGLE 535


>AY118914-1|AAM50774.1|  273|Drosophila melanogaster LD21828p
           protein.
          Length = 273

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +2

Query: 266 LTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLVDFNKAIEENAEFKKKIENLKEEV 445
           ++ RGLK+    + +D I  A   GLEI    G +  D+    E    + + +  LKE+V
Sbjct: 74  ISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSR-HDYELPTEIQKNYTQMVRELKEKV 132

Query: 446 E 448
           E
Sbjct: 133 E 133


>AE014134-1269|AAN10629.1|  273|Drosophila melanogaster CG5171-PB,
           isoform B protein.
          Length = 273

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +2

Query: 266 LTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLVDFNKAIEENAEFKKKIENLKEEV 445
           ++ RGLK+    + +D I  A   GLEI    G +  D+    E    + + +  LKE+V
Sbjct: 74  ISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSR-HDYELPTEIQKNYTQMVRELKEKV 132

Query: 446 E 448
           E
Sbjct: 133 E 133


>AE014134-1268|AAF52509.1|  273|Drosophila melanogaster CG5171-PA,
           isoform A protein.
          Length = 273

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +2

Query: 266 LTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLVDFNKAIEENAEFKKKIENLKEEV 445
           ++ RGLK+    + +D I  A   GLEI    G +  D+    E    + + +  LKE+V
Sbjct: 74  ISGRGLKDVQKQVNIDGITYAGNHGLEIEYPDGSR-HDYELPTEIQKNYTQMVRELKEKV 132

Query: 446 E 448
           E
Sbjct: 133 E 133


>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
           hyperpolarization-activated ionchannel variant
           DMIH-A1B2C2 protein.
          Length = 1319

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 194 LQQEHRARRHWRAQPQRHQTRTPALTTRGLKE 289
           LQQ+ + ++H + Q QRH++ +  L+T G+ +
Sbjct: 89  LQQQQQQQQHLQQQQQRHRSSSSRLSTSGISK 120


>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
           hyperpolarization-activated ionchannel variant
           DMIH-A1B1C1 protein.
          Length = 1282

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 194 LQQEHRARRHWRAQPQRHQTRTPALTTRGLKE 289
           LQQ+ + ++H + Q QRH++ +  L+T G+ +
Sbjct: 89  LQQQQQQQQHLQQQQQRHRSSSSRLSTSGISK 120


>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
           isoform B protein.
          Length = 1290

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 194 LQQEHRARRHWRAQPQRHQTRTPALTTRGLKE 289
           LQQ+ + ++H + Q QRH++ +  L+T G+ +
Sbjct: 89  LQQQQQQQQHLQQQQQRHRSSSSRLSTSGISK 120


>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
           isoform E protein.
          Length = 1327

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 194 LQQEHRARRHWRAQPQRHQTRTPALTTRGLKE 289
           LQQ+ + ++H + Q QRH++ +  L+T G+ +
Sbjct: 89  LQQQQQQQQHLQQQQQRHRSSSSRLSTSGISK 120


>AE014298-586|AAF45910.1| 2779|Drosophila melanogaster CG6450-PC
           protein.
          Length = 2779

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 359 SGLKLVDFNKAIEENAEFKKKIENLKEEVENYSKSFP 469
           +G  L ++ +   +NAE K  I  L++E++   +S+P
Sbjct: 826 NGKALAEYEQLNAQNAELKAVISRLRQELDELRESYP 862


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,805,863
Number of Sequences: 53049
Number of extensions: 365739
Number of successful extensions: 1139
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)