Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30215
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00048-13|AAB53830.1|  484|Caenorhabditis elegans Maternal effec...    92   3e-19
U00048-12|AAL27228.1|  507|Caenorhabditis elegans Maternal effec...    92   3e-19
U20864-12|AAK68358.2|  257|Caenorhabditis elegans Hypothetical p...    31   1.00 
U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z92780-3|CAB07178.2|  289|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z78198-7|CAB01573.1|  622|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>U00048-13|AAB53830.1|  484|Caenorhabditis elegans Maternal effect
           lethal protein32, isoform a protein.
          Length = 484

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = +3

Query: 42  KERAALCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGD 221
           K    L E +   GY++ATGGTD HL LVDLR +G+ GA AE VL+L  +ACNKNT PGD
Sbjct: 335 KNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGD 394

Query: 222 IGALNPSGIRL 254
           + AL P GIRL
Sbjct: 395 VSALRPGGIRL 405



 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 29/78 (37%), Positives = 43/78 (55%)
 Frame = +2

Query: 257 TPALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLVDFNKAIEENAEFKKKIENLK 436
           TPALT+RG +E D + V DFI   ++   +    +G  L DF    E N  FKK + +L 
Sbjct: 407 TPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKSFTETNEPFKKDVADLA 466

Query: 437 EEVENYSKSFPLPGFDKY 490
           + VE +S  F +PG + +
Sbjct: 467 KRVEEFSTKFEIPGNETF 484


>U00048-12|AAL27228.1|  507|Caenorhabditis elegans Maternal effect
           lethal protein32, isoform b protein.
          Length = 507

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 42/71 (59%), Positives = 50/71 (70%)
 Frame = +3

Query: 42  KERAALCEGLISRGYSIATGGTDVHLALVDLRGVGLRGAPAERVLELCSVACNKNTVPGD 221
           K    L E +   GY++ATGGTD HL LVDLR +G+ GA AE VL+L  +ACNKNT PGD
Sbjct: 358 KNAKTLAERMKKHGYALATGGTDNHLLLVDLRPIGVEGARAEHVLDLAHIACNKNTCPGD 417

Query: 222 IGALNPSGIRL 254
           + AL P GIRL
Sbjct: 418 VSALRPGGIRL 428



 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 29/78 (37%), Positives = 43/78 (55%)
 Frame = +2

Query: 257 TPALTTRGLKEADIDIVVDFIDRALKXGLEIIKVSGLKLVDFNKAIEENAEFKKKIENLK 436
           TPALT+RG +E D + V DFI   ++   +    +G  L DF    E N  FKK + +L 
Sbjct: 430 TPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKSFTETNEPFKKDVADLA 489

Query: 437 EEVENYSKSFPLPGFDKY 490
           + VE +S  F +PG + +
Sbjct: 490 KRVEEFSTKFEIPGNETF 507


>U20864-12|AAK68358.2|  257|Caenorhabditis elegans Hypothetical
           protein F32A5.8 protein.
          Length = 257

 Score = 30.7 bits (66), Expect = 1.00
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
 Frame = +2

Query: 212 ARRHWRAQPQRHQTRTPALTTRGLKEADIDIVVDFIDRALKX-GLEIIKVSGLK---LVD 379
           AR     + +   +RT AL T  LKE D+      I       G+E  +   LK   +V 
Sbjct: 8   ARGEGSGRKREFHSRTNALDT--LKEIDLSGKTYAITGTTSGIGIETARALALKGAHVVM 65

Query: 380 FNKAIEENAEFKKKIENLKEEVE 448
           FN+ I E+ + KK+IE  K +V+
Sbjct: 66  FNRNIVESEKLKKRIEEEKPDVK 88


>U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical
           protein K12D9.12 protein.
          Length = 831

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -2

Query: 406 SIFFNGFIEVNKFQPG-NLNDF*TXFQCSINKIDNYINIS 290
           S+FF  FI + K  P  NLN   + FQC    + NY  IS
Sbjct: 10  SLFFLTFILICKTDPRENLNTIVSFFQCEDKCVFNYTEIS 49


>Z92780-3|CAB07178.2|  289|Caenorhabditis elegans Hypothetical
           protein C45G3.3 protein.
          Length = 289

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +2

Query: 224 WRAQPQRHQTRTPALTTRG-LKEADIDIVVDFIDRALKXGL-EIIKVSGLKLVDFNKAIE 397
           WR + + + TR+      G LK+ D +  V+    A+     ++ + S +K V+  + ++
Sbjct: 177 WRDKIESNATRSVRAPAVGFLKQDDANANVEQSKLAIVEAYRKLFEESHIKTVNVAEEVK 236

Query: 398 ENAEFKKKIENLKEEVENYSKS 463
           +NAE  K  + LK     Y KS
Sbjct: 237 KNAEISKIFDELKAWKWIYGKS 258


>Z78198-7|CAB01573.1|  622|Caenorhabditis elegans Hypothetical
           protein F55C5.8 protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 21/90 (23%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
 Frame = +2

Query: 323 RALKXGLEIIKVSG-----LKLVDFNKAIEENAEFKKKIENLKEEVENYSKSFPLPGFDK 487
           +++K  LE +K++G     L ++D  K+ E+ ++ +  +      +E Y +   +PG D 
Sbjct: 342 QSIKAYLEFLKMNGTASRYLAIIDNTKS-EKKSKPQDLLRLYDSVIEIYKEVAEIPGADH 400

Query: 488 Y*D*LG*FNIKSK*LHLYHIFYMKILFSAM 577
             + +  F +K +    +  FYM   +SA+
Sbjct: 401 DKNLIQAFEVKVEYYRAFRCFYMASSYSAL 430


>U53151-5|AAB37068.1|  476|Caenorhabditis elegans Hypothetical
           protein T05B11.4 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/33 (33%), Positives = 22/33 (66%)
 Frame = +2

Query: 392 IEENAEFKKKIENLKEEVENYSKSFPLPGFDKY 490
           +E NAE  +K+ N+   ++  +KS+ + GFD++
Sbjct: 68  LESNAEKSEKLINVPSTLDLSNKSYFIDGFDRF 100


>Z81037-1|CAB02745.1|  819|Caenorhabditis elegans Hypothetical
           protein C17E4.2 protein.
          Length = 819

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 344 EIIKVSGLKLVDFNKAIEENAEFKKKIENLKEEVEN 451
           E +KVS     +  K IEEN   +K+  NLK+   N
Sbjct: 84  EKMKVSRFYRNEIKKVIEENEALRKENNNLKDTYNN 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,466,172
Number of Sequences: 27780
Number of extensions: 196390
Number of successful extensions: 671
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)