Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30214
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0668 - 4882174-4884204 186 1e-47
07_01_0075 - 558829-560859 186 2e-47
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 53 2e-07
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 39 0.003
07_03_1353 - 25966332-25966421,25966477-25966528,25966612-259668... 38 0.006
05_03_0671 + 16831185-16831254,16832017-16832084,16832318-168323... 34 0.092
08_01_0664 + 5741111-5741113,5741491-5741658,5741741-5741864,574... 33 0.28
03_06_0323 + 33121062-33121653,33121748-33121839,33122482-331225... 32 0.37
01_04_0053 - 15444421-15444747,15444905-15445116,15445198-154453... 31 0.65
11_06_0499 + 24354810-24355212,24355677-24355735,24355846-243559... 31 0.86
11_06_0250 + 21701741-21701826,21702094-21702246,21703060-217031... 31 0.86
03_02_1011 + 13198641-13198899,13199471-13199604,13199805-131999... 31 1.1
11_04_0165 + 14305885-14306007,14306538-14306642,14306792-143068... 30 1.5
10_08_1002 + 22160109-22160264,22160374-22160484,22160612-221606... 30 1.5
07_03_1626 + 28223967-28225294,28225506-28225779,28225939-282262... 29 2.6
05_04_0401 - 20982923-20983106,20983129-20983186,20983322-209835... 29 2.6
01_01_0598 + 4443768-4443949,4444053-4444150,4444275-4444308,444... 29 2.6
03_03_0153 - 14910420-14910769,14910946-14911008,14911084-149113... 29 3.5
08_02_1310 - 26037025-26038074 29 4.6
08_02_1305 - 26013022-26014107 28 6.0
01_01_0879 + 6896587-6896701,6896819-6897005,6897475-6897774,689... 28 6.0
12_02_1060 - 25752181-25754229 28 8.0
>06_01_0668 - 4882174-4884204
Length = 676
Score = 186 bits (453), Expect = 1e-47
Identities = 108/223 (48%), Positives = 141/223 (63%), Gaps = 10/223 (4%)
Frame = +1
Query: 49 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFH- 225
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF+
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYSISRIRQFYMRKVKYTQSNFYE 60
Query: 226 ------DRLSRI--IQEFQS*MMSIHFMLIS*TYCTTRIITNLDSDS*IQPDILLTMSQ- 378
D R+ I F ++ + + +I T + + I D L +
Sbjct: 61 KLSTVIDDFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 379 KTM*DC*NMEIRCIGANSSNVRLWVAWPPS*NGKELILHTWNSRQHLARLPSIDPYTRTI 558
++ C +++ +G + ++ PS + + RQH+ARLPSIDP TRT+
Sbjct: 121 DSLYRCKCLKVAALGRMCTVIK---RISPS------LAYLEQIRQHMARLPSIDPNTRTL 171
Query: 559 IICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQY 687
+ICG+PNVGKSSF+NKITRADV+VQPYAFTTKSL+VGH DY+Y
Sbjct: 172 LICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHADYKY 214
Score = 137 bits (331), Expect = 9e-33
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +3
Query: 255 PKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQL 434
P+LDD+HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYGDSLYRCK L
Sbjct: 70 PRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYGDSLYRCKCL 129
Query: 435 KRAALGRMATIMKRQGANLTYLEQ 506
K AALGRM T++KR +L YLEQ
Sbjct: 130 KVAALGRMCTVIKRISPSLAYLEQ 153
>07_01_0075 - 558829-560859
Length = 676
Score = 186 bits (452), Expect = 2e-47
Identities = 108/223 (48%), Positives = 141/223 (63%), Gaps = 10/223 (4%)
Frame = +1
Query: 49 MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFH- 225
M YNFK+I VVP KDFIDIILS+TQR+TPTVVHK Y ISRIR FY+RKVKYTQ NF+
Sbjct: 1 MVQYNFKRITVVPPGKDFIDIILSRTQRQTPTVVHKGYAISRIRQFYMRKVKYTQSNFYE 60
Query: 226 ------DRLSRI--IQEFQS*MMSIHFMLIS*TYCTTRIITNLDSDS*IQPDILLTMSQ- 378
D R+ I F ++ + + +I T + + I D L +
Sbjct: 61 KLSTVIDDFPRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYG 120
Query: 379 KTM*DC*NMEIRCIGANSSNVRLWVAWPPS*NGKELILHTWNSRQHLARLPSIDPYTRTI 558
++ C +++ +G + ++ PS + + RQH+ARLPSIDP TRT+
Sbjct: 121 DSLYRCKCLKVAALGRMCTVIK---RISPS------LAYLEQIRQHMARLPSIDPNTRTL 171
Query: 559 IICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQY 687
+ICG+PNVGKSSF+NKITRADV+VQPYAFTTKSL+VGH DY+Y
Sbjct: 172 LICGYPNVGKSSFMNKITRADVDVQPYAFTTKSLFVGHADYKY 214
Score = 134 bits (324), Expect = 6e-32
Identities = 59/84 (70%), Positives = 72/84 (85%)
Frame = +3
Query: 255 PKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQL 434
P+LD +HPFY DL++VLY+KDHYKL LGQ+NTAR++I +AKDY+RLLKYGDSLYRCK L
Sbjct: 70 PRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNIIAKIAKDYLRLLKYGDSLYRCKCL 129
Query: 435 KRAALGRMATIMKRQGANLTYLEQ 506
K AALGRM T++KR +L YLEQ
Sbjct: 130 KVAALGRMCTVIKRISPSLAYLEQ 153
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +1
Query: 472 NGKELILHTWNSRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTT 651
+GK +I N + L +P +DP+ T+ + G PNVGKSS + ++ EV Y FTT
Sbjct: 219 HGKWVIDDLVNIAKTLRSMPVVDPHIPTLCLVGSPNVGKSSLVRILSSGKPEVCSYPFTT 278
Query: 652 KSLYVGH 672
+ + +GH
Sbjct: 279 RGILMGH 285
Score = 31.1 bits (67), Expect = 0.86
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = +3
Query: 216 ELPRPTVQNYSGIPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRL 395
E+ P PK D+HP+ L+ + + + +Y+ + +++ R I++V K + +
Sbjct: 133 EISVPLRTYTENFPKRRDLHPYERSLIELTFGEGYYEKVIARVDALRKKINSVGKQHASV 192
Query: 396 LKYGDSLYRCKQLKRAALGR 455
SL + + +R + GR
Sbjct: 193 C--AKSLTKREAEERLSEGR 210
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 11/80 (13%)
Frame = +1
Query: 478 KELILHTWNSRQHLARLPSIDPYTRTIIIC-----------GFPNVGKSSFINKITRADV 624
KE+ L + + +A L + P T T +I G PN GKS+ ++ ++RA
Sbjct: 305 KEMWLSKAHKEEEMASLSTGHPGTETYLILELKSIADVGLVGMPNAGKSTLLSALSRARP 364
Query: 625 EVQPYAFTTKSLYVGHTDYQ 684
E+ YAFTT +G Y+
Sbjct: 365 EIADYAFTTLRPNIGSLTYE 384
>07_03_1353 -
25966332-25966421,25966477-25966528,25966612-25966803,
25966900-25967199,25967816-25967925,25968696-25968755,
25968835-25968906,25969172-25969348,25969845-25969898,
25970188-25970217,25970985-25971026
Length = 392
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 562 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQ 684
+ GFP+VGKS+ +NK+T EV Y FTT + G Y+
Sbjct: 80 LVGFPSVGKSTLLNKLTGTFSEVAAYEFTTLTCIPGVIMYK 120
>05_03_0671 +
16831185-16831254,16832017-16832084,16832318-16832394,
16832910-16833090,16833192-16833248,16834182-16834256,
16834820-16834939,16835018-16835224
Length = 284
Score = 34.3 bits (75), Expect = 0.092
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 556 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDY 681
+ + GFP+VGKS+ + +T E Y FTT + G Y
Sbjct: 65 VALIGFPSVGKSTLLTMLTGTHSEAASYEFTTLTCIPGIIQY 106
>08_01_0664 +
5741111-5741113,5741491-5741658,5741741-5741864,
5742078-5742169,5742254-5742352,5742476-5742589,
5743190-5743254,5743342-5743467,5743870-5743945,
5744502-5744594,5744944-5744994,5745084-5745182
Length = 369
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 568 GFPNVGKSSFINKITRADVEVQPYAFTT 651
G PNVGKS+F N +T+ + + + F T
Sbjct: 3 GLPNVGKSTFFNIVTKLSIPAENFPFCT 30
>03_06_0323 +
33121062-33121653,33121748-33121839,33122482-33122565,
33123126-33123203,33123500-33123700,33123821-33123928,
33124145-33124219,33124338-33124537,33124654-33124722,
33125159-33125279,33126840-33127120,33127522-33127594
Length = 657
Score = 32.3 bits (70), Expect = 0.37
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 562 ICGFPNVGKSSFINKITRADVEVQPYAFTT 651
+ G PN GKS+ ++ IT A ++ Y FTT
Sbjct: 281 LVGLPNAGKSTLLSAITLARPDIADYPFTT 310
>01_04_0053 -
15444421-15444747,15444905-15445116,15445198-15445377,
15445572-15445836,15446308-15446522,15446611-15446784,
15446872-15447010,15447523-15447786
Length = 591
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 553 TIIICGFPNVGKSSFINKITRADV 624
T+ I G PNVGKSS IN + R+ V
Sbjct: 270 TVGIVGLPNVGKSSLINSLKRSRV 293
>11_06_0499 +
24354810-24355212,24355677-24355735,24355846-24355929,
24356040-24356337,24357026-24357203,24357686-24357746,
24358209-24358391,24358581-24358742,24358844-24359037,
24359354-24359504,24359551-24359578,24359845-24360117,
24360660-24360724
Length = 712
Score = 31.1 bits (67), Expect = 0.86
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 544 YTRTIIICGFPNVGKSSFINKITRAD-VEVQPYAFTTK 654
Y I I G PNVGKSS +N + D V P + TT+
Sbjct: 372 YIPAIAIVGRPNVGKSSILNALVGEDRTIVSPVSGTTR 409
>11_06_0250 +
21701741-21701826,21702094-21702246,21703060-21703176,
21703288-21703402,21703604-21703624,21703710-21703757,
21704156-21704293,21704789-21704884,21704971-21705084,
21705364-21705432,21705613-21705683,21705785-21705878,
21706202-21706327,21706425-21706514,21706651-21706749
Length = 478
Score = 31.1 bits (67), Expect = 0.86
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 556 IIICGFPNVGKSSFINKITRADVEVQPYAFTT 651
+ + G+ N GKS+ +N++T ADV + F T
Sbjct: 256 VSLVGYTNAGKSTLLNRLTGADVLAEDKLFAT 287
>03_02_1011 +
13198641-13198899,13199471-13199604,13199805-13199934,
13200290-13200450,13200587-13200688,13200786-13200890,
13200965-13201093,13201180-13201320,13201855-13201955,
13202300-13202357,13202656-13202943
Length = 535
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 511 QHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADV-EVQPYAFTTK 654
+ ARL S D ++ G+PNVGKSS IN + V +V P TK
Sbjct: 305 RQFARLKS-DKQAISVGFVGYPNVGKSSVINTLRSKSVCKVAPIPGETK 352
>11_04_0165 +
14305885-14306007,14306538-14306642,14306792-14306869,
14307710-14307757,14308173-14308314,14308394-14308464,
14309210-14309306,14309517-14309728,14311995-14312267
Length = 382
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 547 TRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVG 669
T +++ G PNVGKS+ IN I R P K VG
Sbjct: 136 TLLVMVVGVPNVGKSALINSIHRIVTSRFPVQDKNKRATVG 176
>10_08_1002 +
22160109-22160264,22160374-22160484,22160612-22160689,
22160774-22160921,22161007-22161077,22161430-22161526,
22161603-22161790,22161960-22162223
Length = 370
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 547 TRTIIICGFPNVGKSSFINKITR 615
T T+++ G PNVGKS+ +N + R
Sbjct: 135 TGTVLLVGIPNVGKSAIVNAMHR 157
>07_03_1626 +
28223967-28225294,28225506-28225779,28225939-28226230,
28226492-28226651,28226809-28226917,28227004-28227099
Length = 752
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 562 ICGFPNVGKSSFINKITRADVEVQPYAFTT 651
I G PN GKS+ + I+ A + Y FTT
Sbjct: 457 IVGAPNAGKSTLLTAISAAKPTIANYPFTT 486
>05_04_0401 -
20982923-20983106,20983129-20983186,20983322-20983503,
20983637-20983752,20984148-20984234,20984334-20984477,
20984556-20984672,20984790-20984936,20985717-20985938,
20986919-20987072,20987583-20987632,20987870-20987921,
20987985-20988211
Length = 579
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 562 ICGFPNVGKSSFINKITR 615
I G+PNVGKSS IN++ +
Sbjct: 405 IVGYPNVGKSSLINRLLK 422
>01_01_0598 +
4443768-4443949,4444053-4444150,4444275-4444308,
4444629-4444780,4444871-4445051,4445707-4445887,
4446034-4446142,4446324-4446451,4446758-4446832
Length = 379
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 463 PS*NGKELILHTWNSRQHLARLPSIDPYTRTIIICGFPNVGKSSF 597
PS + ++ W + A S +P +++CG N GKS+F
Sbjct: 6 PSARAEVVVPPEWAAATATAAAASSEPAPPVVVVCGPKNAGKSTF 50
>03_03_0153 -
14910420-14910769,14910946-14911008,14911084-14911339,
14911432-14911522,14911798-14912096,14912177-14912295,
14922536-14922594,14922676-14922965,14923052-14923567,
14923634-14923936
Length = 781
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +1
Query: 598 INKITRADVEVQPYAFTTKSLYVGHTDYQY 687
++++T A +E QP+ +T+ LY H D +
Sbjct: 527 VHRVTFAPLEQQPHVASTRDLYARHRDQDF 556
>08_02_1310 - 26037025-26038074
Length = 349
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +3
Query: 297 NVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQLKRAALGRMA 461
++L + Y+LG +L + + L+DNV + V + Y C +LK+ L +A
Sbjct: 260 HLLAAAERYELGGLKLLSTKKLLDNVTPENVAGIIVCAETYGCPELKKKCLDYLA 314
>08_02_1305 - 26013022-26014107
Length = 361
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = +3
Query: 204 IYPAELPRPTVQNYSGIPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKD 383
IY ELP + + G + F+ L+ + D Y L ++ + L+DN+ D
Sbjct: 247 IYTDELPADAGKLHQGS---SSTNVFFKHLLAMA---DRYALDRLKIMCGQRLLDNMTPD 300
Query: 384 YVRLLKYGDSLYRCKQLKRAAL 449
V + +Y C +LK +
Sbjct: 301 SVAAILVCAEMYNCPELKNKCI 322
>01_01_0879 +
6896587-6896701,6896819-6897005,6897475-6897774,
6897877-6898133,6898596-6898825,6899122-6899247,
6900195-6900374,6901079-6901216,6901515-6901670,
6902409-6902699,6902923-6903162
Length = 739
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 553 TIIICGFPNVGKSSFINKI 609
T+I+ G PNVGKS+ N++
Sbjct: 84 TVILVGRPNVGKSALFNRV 102
>12_02_1060 - 25752181-25754229
Length = 682
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -1
Query: 517 NVDDCSRYVRLAPCRFMMVAMRPRAARLS---CLHRYNESPYFNSLT 386
N +C + + +AP R+ + CL RY++ P+F+ LT
Sbjct: 93 NATECQKCLAMAPAVVQHPCRGSRSVNANYDACLLRYSDEPFFSELT 139
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,355,495
Number of Sequences: 37544
Number of extensions: 388983
Number of successful extensions: 1008
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1007
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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