Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30214
(688 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 142 2e-34
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 142 2e-34
AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical... 56 3e-08
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 36 0.036
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 34 0.083
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 32 0.33
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 32 0.33
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 32 0.33
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 31 1.0
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 31 1.0
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 31 1.0
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 31 1.0
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 31 1.0
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 29 2.4
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 29 2.4
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 29 2.4
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr... 28 5.4
AF022972-4|AAC48236.2| 528|Caenorhabditis elegans Udp-glucurono... 28 5.4
Z93375-3|CAB07565.3| 443|Caenorhabditis elegans Hypothetical pr... 27 9.5
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 27 9.5
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 142 bits (345), Expect = 2e-34
Identities = 58/84 (69%), Positives = 75/84 (89%)
Frame = +3
Query: 255 PKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQL 434
PK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY DSLYRCK L
Sbjct: 71 PKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYADSLYRCKML 130
Query: 435 KRAALGRMATIMKRQGANLTYLEQ 506
KRAALGRM ++KRQ ++ YLEQ
Sbjct: 131 KRAALGRMVKLLKRQKSSFEYLEQ 154
Score = 116 bits (280), Expect = 1e-26
Identities = 50/60 (83%), Positives = 57/60 (95%)
Frame = +1
Query: 508 RQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQY 687
RQHL+RLPSIDP TRT+I+CGFPNVGKSSFIN +TRADVEVQPYAFTTK+LYVGH DY++
Sbjct: 156 RQHLSRLPSIDPATRTLILCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRF 215
Score = 100 bits (240), Expect = 8e-22
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = +1
Query: 52 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 231
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 232 LSRIIQEFQS*MMSIH 279
L++II EF M IH
Sbjct: 63 LTQIITEFPK-MEEIH 77
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 142 bits (345), Expect = 2e-34
Identities = 58/84 (69%), Positives = 75/84 (89%)
Frame = +3
Query: 255 PKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYGDSLYRCKQL 434
PK++++HPFY+DLMN+LYD+DHYK+ LGQ+NTARHLID +A++YVRL+KY DSLYRCK L
Sbjct: 71 PKMEEIHPFYSDLMNILYDRDHYKIALGQMNTARHLIDGIAREYVRLMKYADSLYRCKML 130
Query: 435 KRAALGRMATIMKRQGANLTYLEQ 506
KRAALGRM ++KRQ ++ YLEQ
Sbjct: 131 KRAALGRMVKLLKRQKSSFEYLEQ 154
Score = 116 bits (280), Expect = 1e-26
Identities = 50/60 (83%), Positives = 57/60 (95%)
Frame = +1
Query: 508 RQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQY 687
RQHL+RLPSIDP TRT+I+CGFPNVGKSSFIN +TRADVEVQPYAFTTK+LYVGH DY++
Sbjct: 156 RQHLSRLPSIDPATRTLILCGFPNVGKSSFINNVTRADVEVQPYAFTTKALYVGHLDYRF 215
Score = 100 bits (240), Expect = 8e-22
Identities = 45/76 (59%), Positives = 57/76 (75%)
Frame = +1
Query: 52 SLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHDR 231
S+YNFK+I VP A++ D++LSKTQRKTPTVVH+ Y I RIR FY RK+K+ QQ HD+
Sbjct: 3 SMYNFKRITCVPNAQELKDVVLSKTQRKTPTVVHRQYSIGRIRAFYARKIKFLQQTLHDK 62
Query: 232 LSRIIQEFQS*MMSIH 279
L++II EF M IH
Sbjct: 63 LTQIITEFPK-MEEIH 77
>AF036706-11|AAO91698.1| 53|Caenorhabditis elegans Hypothetical
protein T07A9.9c protein.
Length = 53
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 396 LKYGDSLYRCKQLKRAALGRMATIMKRQGANLTYLEQSSTF 518
+KY DSLYRCK LKRAALGRM ++KRQ ++ YL+ F
Sbjct: 1 MKYADSLYRCKMLKRAALGRMVKLLKRQKSSFEYLKPKHLF 41
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 562 ICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQ 684
+ GFPN GKSS + I+RA +V Y FTT ++G Y+
Sbjct: 193 LVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPHIGVVFYE 233
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.036
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 562 ICGFPNVGKSSFINKITRADVEVQPYAFTT 651
I G PNVGKS+F N +T+++ + + + F T
Sbjct: 26 ILGLPNVGKSTFFNVLTKSEAQAENFPFCT 55
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 34.3 bits (75), Expect = 0.083
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 556 IIICGFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDY 681
+ + GFP+VGKS+ ++ +T E Y FTT + G Y
Sbjct: 65 VAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTLTCIPGVISY 106
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 478 KELILHTWNSRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRA-DVEVQPYAFTTK 654
K+ ++ + H++ PS P ++ G+PNVGKSS INK+ V V T+
Sbjct: 108 KDELIAKFKELGHVSDEPSAKPVMVGMV--GYPNVGKSSTINKLAGGKKVSVSATPGKTR 165
Query: 655 SLYVGHTDYQ 684
H D Q
Sbjct: 166 HFQTIHIDSQ 175
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 478 KELILHTWNSRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRA-DVEVQPYAFTTK 654
K+ ++ + H++ PS P ++ G+PNVGKSS INK+ V V T+
Sbjct: 108 KDELIAKFKELGHVSDEPSAKPVMVGMV--GYPNVGKSSTINKLAGGKKVSVSATPGKTR 165
Query: 655 SLYVGHTDYQ 684
H D Q
Sbjct: 166 HFQTIHIDSQ 175
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 478 KELILHTWNSRQHLARLPSIDPYTRTIIICGFPNVGKSSFINKITRA-DVEVQPYAFTTK 654
K+ ++ + H++ PS P ++ G+PNVGKSS INK+ V V T+
Sbjct: 277 KDELIAKFKELGHVSDEPSAKPVMVGMV--GYPNVGKSSTINKLAGGKKVSVSATPGKTR 334
Query: 655 SLYVGHTDYQ 684
H D Q
Sbjct: 335 HFQTIHIDSQ 344
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = -2
Query: 324 CNDPCRTIRS*DQHKMDGHHLTLEFLNNSGQSVVEVLLGIFHFSNIKPTYS*Y 166
C C++ +++K D H+ + + +SV E+ I+H+ ++ +Y Y
Sbjct: 210 CKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVY 262
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 568 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQ 684
GFP+VGKS+ + + EV Y FTT + G Y+
Sbjct: 69 GFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYK 107
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = -2
Query: 324 CNDPCRTIRS*DQHKMDGHHLTLEFLNNSGQSVVEVLLGIFHFSNIKPTYS*Y 166
C C++ +++K D H+ + + +SV E+ I+H+ ++ +Y Y
Sbjct: 210 CKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVY 262
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 562 ICGFPNVGKSSFINK-ITRADVEVQPYAFTT 651
+ GFPN GKS+ + + V++ YAFTT
Sbjct: 166 LLGFPNAGKSTLLKALVPEKSVKIADYAFTT 196
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = -2
Query: 324 CNDPCRTIRS*DQHKMDGHHLTLEFLNNSGQSVVEVLLGIFHFSNIKPTYS*Y 166
C C++ +++K D H+ + + +SV E+ I+H+ ++ +Y Y
Sbjct: 210 CKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVY 262
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = -2
Query: 324 CNDPCRTIRS*DQHKMDGHHLTLEFLNNSGQSVVEVLLGIFHFSNIKPTYS*Y 166
C C++ +++K D H+ + + +SV E+ I+H+ ++ +Y Y
Sbjct: 210 CKTTCQSSYKTEEYKKDKHYGASAYKVTTTKSVTEIQTEIYHYGPVEASYKVY 262
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 568 GFPNVGKSSFINKITRADVEVQPYAFTTKSLYVGHTDYQ 684
GFP+VGKS+ + + EV Y FTT + G Y+
Sbjct: 69 GFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIRYK 107
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 562 ICGFPNVGKSSFINKITR 615
+ GFPNVGKSS IN + R
Sbjct: 264 VVGFPNVGKSSVINSLKR 281
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 568 GFPNVGKSSFINKITRADV-EVQPYAFTTK 654
G+PNVGKSS +N + + V + P A TK
Sbjct: 332 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 361
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 568 GFPNVGKSSFINKITRADV-EVQPYAFTTK 654
G+PNVGKSS +N + + V + P A TK
Sbjct: 273 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 302
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 568 GFPNVGKSSFINKITRADV-EVQPYAFTTK 654
G+PNVGKSS +N + + V + P A TK
Sbjct: 332 GYPNVGKSSLVNTLRKKKVCKTAPIAGETK 361
>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
protein F47A4.5 protein.
Length = 1071
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +3
Query: 282 YADLMNVLYDKDHYKLGLGQLNTARHLIDN 371
Y D+++ D +H+ + G++ T HL+DN
Sbjct: 264 YYDIVSTDVDDEHFVIVAGKVTTDEHLMDN 293
>AF022972-4|AAC48236.2| 528|Caenorhabditis elegans
Udp-glucuronosyltransferase protein37 protein.
Length = 528
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 KELILHTWNSRQHLARLPSIDPYTRTI 558
KEL+L RLPS+DPY+R +
Sbjct: 454 KELLLRHAEFAAQFGRLPSLDPYSRQL 480
>Z93375-3|CAB07565.3| 443|Caenorhabditis elegans Hypothetical
protein C38C6.5 protein.
Length = 443
Score = 27.5 bits (58), Expect = 9.5
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +3
Query: 171 KNTWVLY*KSEIYPAELPR---PTVQNYSGIPK 260
KN + Y +I A PR P + NYSGIPK
Sbjct: 196 KNLDIKYSSQQIMKAFTPRFFHPIIANYSGIPK 228
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 559 IICGFPNVGKSSFINKI 609
++ G PNVGKSS IN I
Sbjct: 119 MVVGIPNVGKSSLINAI 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,281,767
Number of Sequences: 27780
Number of extensions: 356736
Number of successful extensions: 955
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -