Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30212
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 151 6e-37
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 1e-36
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 148 4e-36
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 135 3e-32
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 91 7e-19
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 6e-13
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 8e-09
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 55 5e-08
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 1.00
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.3
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 1.7
SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013) 30 2.3
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.3
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.0
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 3.0
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_9053| Best HMM Match : TIG (HMM E-Value=0) 29 5.3
SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 9.3
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.3
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 151 bits (366), Expect = 6e-37
Identities = 73/80 (91%), Positives = 77/80 (96%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
F+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+
Sbjct: 150 FHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSV 209
Query: 690 LTIEDGIFEVKSTAGDTHLG 749
LTIEDGIFEVKSTAGDTHLG
Sbjct: 210 LTIEDGIFEVKSTAGDTHLG 229
Score = 138 bits (334), Expect = 4e-33
Identities = 61/86 (70%), Positives = 72/86 (83%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGSKPKIKVAYKGEDKTFFPEEVSSM 429
P NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
VLTKMKETAEAYLG V +AV+TVPA
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPA 148
Score = 132 bits (318), Expect = 4e-31
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 245 MNP 253
MNP
Sbjct: 61 MNP 63
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 150 bits (363), Expect = 1e-36
Identities = 73/80 (91%), Positives = 75/80 (93%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
FNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+
Sbjct: 243 FNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSV 302
Query: 690 LTIEDGIFEVKSTAGDTHLG 749
L+IEDGIFEVKST GDTHLG
Sbjct: 303 LSIEDGIFEVKSTHGDTHLG 322
Score = 132 bits (319), Expect = 3e-31
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 245 MNPT 256
MNPT
Sbjct: 61 MNPT 64
Score = 111 bits (267), Expect = 6e-25
Identities = 63/111 (56%), Positives = 72/111 (64%), Gaps = 25/111 (22%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGSKPKIKVAYKGEDKTFFPEEV--- 420
P NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ +PK+KV YKGE KTFF EEV
Sbjct: 63 PTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNE 122
Query: 421 ----------------------SSMVLTKMKETAEAYLGKTVQNAVITVPA 507
SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 123 AGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPA 173
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 415 EVSSMVLTKMKETAEAYLGKTVQNAVITVPA 507
++SSMVL KMKETAEAYLG V +AV+TVPA
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPA 241
Score = 31.1 bits (67), Expect = 1.00
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 510 FNDSQRQATKDAG 548
FNDSQRQATKDAG
Sbjct: 175 FNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 148 bits (359), Expect = 4e-36
Identities = 71/81 (87%), Positives = 78/81 (96%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
FNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSI
Sbjct: 150 FNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSI 209
Query: 690 LTIEDG-IFEVKSTAGDTHLG 749
LTI+DG +FEVKSTAGDTHLG
Sbjct: 210 LTIDDGSLFEVKSTAGDTHLG 230
Score = 139 bits (336), Expect = 3e-33
Identities = 64/86 (74%), Positives = 76/86 (88%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGSKPKIKVAYKGEDKTFFPEEVSSM 429
P NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD +KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
VL KMKETAEAYLG+ V +AVITVPA
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPA 148
Score = 127 bits (306), Expect = 1e-29
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +2
Query: 65 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 245 MNP 253
+NP
Sbjct: 61 LNP 63
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 135 bits (327), Expect = 3e-32
Identities = 62/80 (77%), Positives = 74/80 (92%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
FND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+
Sbjct: 848 FNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSL 906
Query: 690 LTIEDGIFEVKSTAGDTHLG 749
LTI++G+FEV +T GDTHLG
Sbjct: 907 LTIDNGVFEVVATNGDTHLG 926
Score = 118 bits (283), Expect = 7e-27
Identities = 55/86 (63%), Positives = 68/86 (79%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGSKPKIKVAYKGEDKTFFPEEVSSM 429
P NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 430 VLTKMKETAEAYLGKTVQNAVITVPA 507
VLTKMKETAEAYLGK V +AV+TVPA
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPA 846
Score = 99 bits (238), Expect = 2e-21
Identities = 46/58 (79%), Positives = 52/58 (89%), Gaps = 1/58 (1%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNP 253
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNP 761
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 91.5 bits (217), Expect = 7e-19
Identities = 44/80 (55%), Positives = 58/80 (72%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSI 689
F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+
Sbjct: 180 FDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSL 238
Query: 690 LTIEDGIFEVKSTAGDTHLG 749
L I+ G+F + AG+ LG
Sbjct: 239 LNIQGGMFVTMAMAGNNRLG 258
Score = 65.3 bits (152), Expect = 5e-11
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Frame = +2
Query: 71 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 244
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 245 MNP 253
+NP
Sbjct: 90 INP 92
Score = 58.4 bits (135), Expect = 6e-09
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Frame = +1
Query: 250 PHNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-SKPKIKVAYKGEDKTFFPEEVSS 426
P NTI+DAKR IG+ F + K + F V +D V KG PEE+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGG 151
Query: 427 MVLTKMKETAEAYLGKTVQNAVITVPASSMTLKDKPQKMQVPSLA 561
V+ K++ AE L TV AV++VPA +K + ++ SLA
Sbjct: 152 YVIKKLRTMAERNLTTTVTKAVMSVPA-EFDIKQRNATVKAASLA 195
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 71.7 bits (168), Expect = 6e-13
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGSKPKIKVAYKGEDKTFFPEEVSSMV 432
NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V +M+
Sbjct: 121 NTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAML 180
Query: 433 LTKMKETAEAYLGKTVQNAVITVPA 507
T++K TAE L V + VI+VP+
Sbjct: 181 FTRLKTTAEIALKTKVTDCVISVPS 205
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +3
Query: 483 ECSYHGSRVFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 653
+C + D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 654 FDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 749
D+G + V I G +V STA + +LG
Sbjct: 258 VDIGHSSLQVCITAFLKGQLKVLSTAVEPNLG 289
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +2
Query: 83 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 238
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +3
Query: 645 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 749
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LG
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLG 36
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 55.2 bits (127), Expect = 5e-08
Identities = 39/71 (54%), Positives = 42/71 (59%), Gaps = 26/71 (36%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVL------------------------RIINEPTAAAIAYGL 617
FND+QRQATKDAGTI+GL+VL RIINEPTAAAIAYGL
Sbjct: 49 FNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAIAYGL 108
Query: 618 DKK--GTGERN 644
DK G ERN
Sbjct: 109 DKARGGKAERN 119
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +1
Query: 370 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 507
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPA 47
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Frame = +3
Query: 510 FNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTF 677
FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G +
Sbjct: 116 FNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASST 175
Query: 678 DVSIL 692
+I+
Sbjct: 176 VATIV 180
Score = 34.3 bits (75), Expect = 0.11
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 364 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 504
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 134 GKVEIIANDQGNRTTPSYVAFTDTERLI 217
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 1.00
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +2
Query: 143 EIIANDQGNRTTPSYVAFT-DTERL 214
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 645 VLIFDLGGGTFDVSILTIEDGIFEVK 722
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 361 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPASSMTLKDKPQK 540
+PK K + E+ EE +M ++K LGK V+ + T ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 541 MQ 546
Q
Sbjct: 714 SQ 715
>SB_52667| Best HMM Match : MRP-L47 (HMM E-Value=0.0013)
Length = 119
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +1
Query: 274 KRLIGRKFEDATVQADMKHWPFEVVSDGSKPKIKVAYKGEDKTFFPEEVSSMVLTKMKET 453
K ++G + E A + + WPF+V + K + K P + +++ +TKM+E
Sbjct: 42 KLVLGER-ERAIQELSQQQWPFDVQDPALESTSKDLKETPIKETSPVQAATLNMTKMEEN 100
Query: 454 AEAYLGKT 477
+ G T
Sbjct: 101 QQELSGNT 108
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 651 IFDLGGGTFDVSILTIEDGIFEV 719
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = -1
Query: 458 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLLPSLTTSKGQCFMSACTVASSNLRPMR 279
S F+F ST + +S +KV+ SPL + + +P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 278 RLASNIVL 255
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 52 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 228
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 229 QEPGGDEPHNTIFDA 273
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 594 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL 746
A A L +G E + D G GT VS + +E+G +++ D H+
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHI 1555
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -2
Query: 742 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 626
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -1
Query: 251 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 153
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Frame = -1
Query: 728 GGFHLEDTILDGKDGHVEGTAAEVK--DKYISFSSTLFVKTVSNRSSS--RFIDDSENVQ 561
G F L D+ G++GH EG+ +EV + ++ + F +T S S F ++S ++Q
Sbjct: 285 GVFVLVDSKDSGENGHTEGSNSEVGTIENFVKTQTKQFKQTACKYSESNLEFNENSAHLQ 344
Query: 560 ---ARDGTC 543
AR TC
Sbjct: 345 VYNARISTC 353
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 658 TSAAVPSTCPSLPSRMVSSR*NPPPATP 741
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_9053| Best HMM Match : TIG (HMM E-Value=0)
Length = 2990
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 11 HVC*VVLRTSNKTD*KYKMAKAPAVGIDL 97
HVC +V T K K ++K PA GI+L
Sbjct: 1200 HVCNIVSNTETKITCKLDVSKTPAPGIEL 1228
>SB_47707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 429 GAYENEG-NCRSLSWQNCAECSYHGSRVFNDSQRQAT--KDAGTISGLNVLRIINEPTAA 599
GA +N + SL W C + YHG +V + A AG S NV+R + P A
Sbjct: 512 GATQNANESLNSLVWARCPKHKYHGYKVIRCAVAAAVCHFHAGASSRENVMRRLCVP-AG 570
Query: 600 AIAYGLDKKGTG 635
G K TG
Sbjct: 571 HTQEGHPSKRTG 582
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 653 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 567
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +3
Query: 93 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 236
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/72 (23%), Positives = 29/72 (40%)
Frame = +2
Query: 104 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVS 283
T++ + H I+ N G +TP + T A + + M PT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 284 SDVSSKMLLCKP 319
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,276,179
Number of Sequences: 59808
Number of extensions: 613349
Number of successful extensions: 2244
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2233
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -