Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30211
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.            29   9.1  
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.               29   9.1  

>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
          Length = 6884

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 12   RHQVQGDDGRPAYGDGKDKTSPRVSWKLIALWENNK 119
            RH  +  +  P + DG++KT  +     + LWEN K
Sbjct: 1484 RHLQEMANSLPHFKDGREKTVNQQCQNTVVLWENTK 1519


>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
          Length = 6885

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 12   RHQVQGDDGRPAYGDGKDKTSPRVSWKLIALWENNK 119
            RH  +  +  P + DG++KT  +     + LWEN K
Sbjct: 1485 RHLQEMANSLPHFKDGREKTVNQQCQNTVVLWENTK 1520


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,007,038
Number of Sequences: 237096
Number of extensions: 1233613
Number of successful extensions: 3028
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3028
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)