Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30211
         (500 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g63450.1 68418.m07965 cytochrome P450, putative                     28   4.1  
At1g20400.1 68414.m02544 myosin heavy chain-related                    28   4.1  
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica...    27   5.4  
At3g48520.1 68416.m05296 cytochrome P450 family protein similar ...    27   5.4  

>At5g63450.1 68418.m07965 cytochrome P450, putative
          Length = 510

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 57  GKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVLGVG 176
           G+D TS  ++W    L +N+ V  KIL+  RN+   LG+G
Sbjct: 306 GRDTTSAAMTWLFWLLSQNDDVETKILDELRNKG-SLGLG 344


>At1g20400.1 68414.m02544 myosin heavy chain-related
          Length = 944

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 245 PAASKYDNDVLFYIYNREYSKALTLSRTVEP 337
           P    +  D LF IY R YS+   +S T  P
Sbjct: 89  PEKRPFSRDFLFLIYTRPYSRVRKISETDAP 119


>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
           to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
          Length = 802

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 13/23 (56%), Positives = 13/23 (56%)
 Frame = +3

Query: 138 NTERNQYLVLGVGTNWNGDHMAF 206
           N   N  L L VGTN NG H AF
Sbjct: 270 NHHYNSSLELAVGTNNNGGHFAF 292


>At3g48520.1 68416.m05296 cytochrome P450 family protein similar to
           Cytochrome P450 94A1  (P450-dependent fatty acid
           omega-hydroxylase) (SP:O81117) {Vicia sativa}; contains
           Pfam profile: PF00067 cytochrome P450
          Length = 506

 Score = 27.5 bits (58), Expect = 5.4
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 57  GKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVLGVG 176
           G+D TS  ++W    L EN+ V  KIL  E +  + LG+G
Sbjct: 304 GRDTTSAAMTWLFWLLTENDDVERKILE-EVDPLVSLGLG 342


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,223,366
Number of Sequences: 28952
Number of extensions: 172251
Number of successful extensions: 469
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 469
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 888318720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)