Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30208
(550 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q16HD9 Cluster: Activating signal cointegrator 1 comple... 87 2e-16
UniRef50_Q8N3C0 Cluster: Activating signal cointegrator 1 comple... 76 5e-13
UniRef50_Q9VF56 Cluster: CG5205-PA; n=5; Endopterygota|Rep: CG52... 71 2e-11
UniRef50_A3AMK8 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_Q4RBL7 Cluster: Chromosome undetermined SCAF21148, whol... 55 9e-07
UniRef50_Q9SYP1 Cluster: F9H16.5 protein; n=35; Eukaryota|Rep: F... 51 2e-05
UniRef50_Q675T1 Cluster: Putative helicase; n=1; Oikopleura dioi... 50 3e-05
UniRef50_O75643 Cluster: U5 small nuclear ribonucleoprotein 200 ... 50 4e-05
UniRef50_Q9UGP8 Cluster: Translocation protein SEC63 homolog; n=... 46 6e-04
UniRef50_Q4T4J7 Cluster: Chromosome undetermined SCAF9604, whole... 45 0.001
UniRef50_UPI000049A24D Cluster: DEAD/DEAH box helicase; n=1; Ent... 45 0.001
UniRef50_Q4MYU4 Cluster: ATP-dependent RNA helicase, putative; n... 43 0.005
UniRef50_Q013J2 Cluster: RNA helicase; n=4; Viridiplantae|Rep: R... 40 0.038
UniRef50_Q9XWI5 Cluster: Putative uncharacterized protein; n=2; ... 38 0.12
UniRef50_Q4RRA3 Cluster: Chromosome 14 SCAF15003, whole genome s... 38 0.15
UniRef50_Q9VS57 Cluster: CG8583-PA; n=7; Endopterygota|Rep: CG85... 38 0.15
UniRef50_Q7REE9 Cluster: Putative uncharacterized protein PY0511... 38 0.20
UniRef50_UPI00015B6174 Cluster: PREDICTED: similar to SEC63 prot... 37 0.27
UniRef50_Q55CI8 Cluster: DEAD/DEAH box helicase; n=3; Eukaryota|... 37 0.27
UniRef50_A7AM78 Cluster: Sec63 domain containing protein; n=1; B... 36 0.47
UniRef50_Q4WRV7 Cluster: Protein translocation complex componene... 36 0.47
UniRef50_A5K663 Cluster: U5 small nuclear ribonucleoprotein-spec... 36 0.62
UniRef50_A6QZE8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.62
UniRef50_Q9UT24 Cluster: Pre-mRNA-splicing factor brr2; n=4; Euk... 36 0.62
UniRef50_Q54G57 Cluster: DEAD/DEAH box helicase; n=1; Dictyostel... 34 1.9
UniRef50_A0CXW7 Cluster: Chromosome undetermined scaffold_30, wh... 34 1.9
UniRef50_A2QAX0 Cluster: Complex: S. cerevisiae Sec63p is subuni... 34 1.9
UniRef50_UPI0000D56550 Cluster: PREDICTED: similar to CG5205-PA,... 34 2.5
UniRef50_A6VTG8 Cluster: Polysaccharide biosynthesis protein Cap... 34 2.5
UniRef50_A2XDW7 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q7QVE3 Cluster: GLP_542_7991_6993; n=1; Giardia lamblia... 33 4.4
UniRef50_Q235I9 Cluster: Type III restriction enzyme, res subuni... 33 4.4
UniRef50_A4RJ20 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_Q4QGA4 Cluster: RNA helicase, putative; n=7; Trypanosom... 33 5.8
UniRef50_A5JZH6 Cluster: Translocation protein SEC63, putative; ... 33 5.8
UniRef50_Q3JS13 Cluster: Putative uncharacterized protein; n=1; ... 32 7.6
UniRef50_Q2W783 Cluster: Tungsten-containing aldehyde ferredoxin... 32 7.6
UniRef50_Q4Q7J3 Cluster: DREV methyltransferase, putative; n=6; ... 32 7.6
UniRef50_Q6FWX7 Cluster: Similar to sp|P43614 Saccharomyces cere... 32 7.6
UniRef50_Q2URT5 Cluster: RNA helicase BRR2; n=33; Eukaryota|Rep:... 32 7.6
>UniRef50_Q16HD9 Cluster: Activating signal cointegrator 1 complex
subunit 3, helc1; n=1; Aedes aegypti|Rep: Activating
signal cointegrator 1 complex subunit 3, helc1 - Aedes
aegypti (Yellowfever mosquito)
Length = 319
Score = 87.4 bits (207), Expect = 2e-16
Identities = 37/85 (43%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 QIQQIHRAICDLPTTDIKLHVRGLWFDADHEQDKRITQPPARDQWMPLHADQEYTLLLDM 182
+I+QI++ +C LP+ +++L +RG + D + D+ + QP RD WM ++ADQEY L + M
Sbjct: 145 EIEQIYKVLCSLPSINVQLSIRGPFGD-EPNADRPVMQPQTRDTWMEIYADQEYVLNVQM 203
Query: 183 QRRGG-NPNNVLCPRFPRGKNEGWF 254
R G + N+ CP+FP+GK+EGWF
Sbjct: 204 IRLGSFDTLNIHCPKFPKGKDEGWF 228
Score = 77.8 bits (183), Expect = 2e-13
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Frame = +2
Query: 221 EIPARQERGLVLTLGTVDDGELHALKRVPPRGTA---QLTFYTPSRTGRIIYTVYIMSDS 391
+ P ++ G LTLG +GEL A+KR R QL FY PSR GR IYTVY+MSD
Sbjct: 218 KFPKGKDEGWFLTLGHQAEGELIAMKRCVYRSNKSSHQLCFYGPSRLGRCIYTVYLMSDG 277
Query: 392 YMGLDQQYDLQFEIID 439
Y+GLDQQYD+ ++++
Sbjct: 278 YIGLDQQYDIHLDVLE 293
>UniRef50_Q8N3C0 Cluster: Activating signal cointegrator 1 complex
subunit 3; n=42; Eumetazoa|Rep: Activating signal
cointegrator 1 complex subunit 3 - Homo sapiens (Human)
Length = 2202
Score = 76.2 bits (179), Expect = 5e-13
Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVP---PRGTAQLTFYTPSRTGRIIYTVYIMSDSYM 397
P ++ G L LG VD EL ALKRV A L+FYTP GR IYT+Y MSD Y+
Sbjct: 2108 PKSKDEGWFLILGEVDKRELIALKRVGYIRNHHVASLSFYTPEIPGRYIYTLYFMSDCYL 2167
Query: 398 GLDQQYDLQFEIIDAMPSENVD-KVYDTI 481
GLDQQYD+ + A S V+ KV D++
Sbjct: 2168 GLDQQYDIYLNVTQASLSAQVNTKVSDSL 2196
Score = 54.0 bits (124), Expect = 2e-06
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Frame = +3
Query: 9 QQIHRAICDLPTTDIKLHVRGLWFD---ADHEQDKRITQPPARD--QWMPLHADQEYTLL 173
+Q + LP ++ + V+G W D +E RD +W+ LHADQEY L
Sbjct: 2024 KQAWNFLSHLPVINVGISVKGSWDDLVEGHNELSVSTLTADKRDDNKWIKLHADQEYVLQ 2083
Query: 174 LDMQR-----RGGNPNN-VLCPRFPRGKNEGWF 254
+ +QR G P + + PRFP+ K+EGWF
Sbjct: 2084 VSLQRVHFGFHKGKPESCAVTPRFPKSKDEGWF 2116
>UniRef50_Q9VF56 Cluster: CG5205-PA; n=5; Endopterygota|Rep: CG5205-PA
- Drosophila melanogaster (Fruit fly)
Length = 2183
Score = 70.5 bits (165), Expect = 2e-11
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVPPRG---TAQLTFYTPSRTGRIIYTVYIMSDSYM 397
P + LTLG+ + EL A+KRV RG T +++F R GR+ T+Y+MSD M
Sbjct: 2106 PKPKNEAWFLTLGSQANDELLAMKRVSIRGQRCTNRISFQATPRLGRLQLTLYLMSDCLM 2165
Query: 398 GLDQQYDLQFEIIDA 442
G DQQYDLQFEIIDA
Sbjct: 2166 GFDQQYDLQFEIIDA 2180
Score = 63.7 bits (148), Expect = 3e-09
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Frame = +3
Query: 3 QIQQIHRAICDLPTTDIKLHVRGLWFDADHEQDKRITQPPARDQWMPLHADQEYTLLLDM 182
+I+++++ I DLP I++ V G + ++ + R +WM LHA+++Y L++++
Sbjct: 2023 EIEKMYKVIQDLPEIAIQIFVEGRHMENEYAKRPLSLSDDTRGEWMSLHANEDYVLIVNL 2082
Query: 183 -------QRRGGNPN-NVLCPRFPRGKNEGWF 254
QRRGG + V CP++P+ KNE WF
Sbjct: 2083 QRLNVSGQRRGGGQSYTVHCPKYPKPKNEAWF 2114
>UniRef50_A3AMK8 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 2116
Score = 58.0 bits (134), Expect = 1e-07
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVP--PRGTAQLTFYTPSRTGRIIYTVYIMSDSYMG 400
P +E G L +G +L A+KRV R +L F P+ GR Y VY+MSDSY+G
Sbjct: 2040 PKPKEEGWWLVIGDRSTDQLLAIKRVKLQKRARVKLEFAAPAEAGRKDYMVYLMSDSYLG 2099
Query: 401 LDQQYDLQFEIIDA 442
DQ+Y+ ++ DA
Sbjct: 2100 CDQEYEFAVDVKDA 2113
>UniRef50_Q4RBL7 Cluster: Chromosome undetermined SCAF21148, whole
genome shotgun sequence; n=6; Deuterostomia|Rep:
Chromosome undetermined SCAF21148, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 177
Score = 55.2 bits (127), Expect = 9e-07
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Frame = +3
Query: 3 QIQQIHRAICDLPTTDIKLHVRGLWFDADHEQDKRI----TQPPARDQWMPLHADQEYTL 170
Q+ Q+ + LP +++L V+G W ++ + ++R+ P + W+ + ADQEY L
Sbjct: 47 QVAQVWSHLSLLPVLEVELSVKGWWEESQEQLERRLPPAGAHPREQSSWLDVQADQEYVL 106
Query: 171 LLDMQR-----RGGNPNNVLCPRFPRGKNEGWF 254
+ ++R + PRFP+ K+EGWF
Sbjct: 107 QVALRRLHPGQQKRRDGRAQAPRFPKLKDEGWF 139
Score = 41.1 bits (92), Expect = 0.016
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +2
Query: 191 RRQSEQRAMSEIPARQERGLVLTLGTVDDGELHALKR---VPPRGTAQLTFYTPSRTGR 358
+R+ + P ++ G L LG V+ +L ALKR V R + L FYTP RTGR
Sbjct: 119 KRRDGRAQAPRFPKLKDEGWFLVLGEVEHRQLLALKRLGHVQARSSTALAFYTPERTGR 177
>UniRef50_Q9SYP1 Cluster: F9H16.5 protein; n=35; Eukaryota|Rep:
F9H16.5 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 2171
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVP--PRGTAQLTFYTPSRTGRIIYTVYIMSDSYMG 400
P +E G L +G +L A+KRV + +L F PS G YT+Y M DSY+G
Sbjct: 2090 PKTKEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVKLDFTAPSEPGEKSYTLYFMCDSYLG 2149
Query: 401 LDQQYDLQFEI 433
DQ+Y ++
Sbjct: 2150 CDQEYSFSVDV 2160
>UniRef50_Q675T1 Cluster: Putative helicase; n=1; Oikopleura
dioica|Rep: Putative helicase - Oikopleura dioica
(Tunicate)
Length = 2017
Score = 50.4 bits (115), Expect = 3e-05
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVPPRGT---AQLTFYTPSRTGRIIYTVYIMSDSYM 397
P + G + +G + GEL ALK++ T ++ F+ T I+ TVYI+SDSY+
Sbjct: 1945 PKPKLEGWFIIIGNAETGELLALKKLSQFNTKSKTEMIFFEVPETKSIL-TVYIISDSYL 2003
Query: 398 GLDQQYDLQFE 430
GLDQ YD++ +
Sbjct: 2004 GLDQTYDIRID 2014
>UniRef50_O75643 Cluster: U5 small nuclear ribonucleoprotein 200 kDa
helicase; n=35; Eukaryota|Rep: U5 small nuclear
ribonucleoprotein 200 kDa helicase - Homo sapiens (Human)
Length = 2136
Score = 50.0 bits (114), Expect = 4e-05
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVP--PRGTAQLTFYTPSRTGRIIYTVYIMSDSYMG 400
P ++E G + +G L ++KR+ + +L F P+ TG YT+Y MSD+YMG
Sbjct: 2057 PQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPA-TGAHNYTLYFMSDAYMG 2115
Query: 401 LDQQYDLQFEIIDAMPSENVD 463
DQ+Y ++ +A + D
Sbjct: 2116 CDQEYKFSVDVKEAETDSDSD 2136
>UniRef50_Q9UGP8 Cluster: Translocation protein SEC63 homolog; n=31;
Euteleostomi|Rep: Translocation protein SEC63 homolog -
Homo sapiens (Human)
Length = 760
Score = 46.0 bits (104), Expect = 6e-04
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = +2
Query: 323 QLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMPSENVDKVYDT 478
+L F P + G YTV++ SDSYMGLDQ L+ E+ +A P +DT
Sbjct: 680 ELKFPAPGKPGNYQYTVFLRSDSYMGLDQIKPLKLEVHEAKPVPENHPQWDT 731
>UniRef50_Q4T4J7 Cluster: Chromosome undetermined SCAF9604, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF9604, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1560
Score = 45.2 bits (102), Expect = 0.001
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVP--PRGTAQLTFYTPSRTGRIIYTVYIMSDSYMG 400
P ++E G + +G L ++KR+ + +L F P+ G YT+Y MSD+YMG
Sbjct: 1481 PQKREEGWWVVIGDPKSNSLISIKRLTLQQKAKVKLDFVAPAM-GIHNYTLYFMSDAYMG 1539
Query: 401 LDQQYDLQFEIIDA 442
DQ+Y ++ +A
Sbjct: 1540 CDQEYKFSVDVKEA 1553
>UniRef50_UPI000049A24D Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 1804
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +2
Query: 215 MSEIPARQERGLVLTLGTVDDGELHALKRVPPR--GTAQLTFYTPSRTGRIIYTVYIMSD 388
+ P ++ G L + DG L A+KR+ + T L P G Y V ++SD
Sbjct: 1730 LPRFPKTKQEGWYLII-IKPDGGLAAMKRISLKKNSTISLMCVCPLFPGEFTYKVLLLSD 1788
Query: 389 SYMGLDQQYDLQFEII 436
Y+GLDQQYDL +
Sbjct: 1789 CYIGLDQQYDLPITFV 1804
Score = 34.3 bits (75), Expect = 1.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 153 DQEYTLLLDMQRRGGNPNNVLCPRFPRGKNEGWF 254
D+ + + + ++R N N PRFP+ K EGW+
Sbjct: 1709 DKVFDITISLKRINDNLNYAFLPRFPKTKQEGWY 1742
>UniRef50_Q4MYU4 Cluster: ATP-dependent RNA helicase, putative; n=3;
Theileria|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 2249
Score = 42.7 bits (96), Expect = 0.005
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 LTLGTVDDGELHALKRVPPRGT--AQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQF 427
+ +G D +L+ +KR T +L PS G+ T+Y++SDSY+ D QY L+
Sbjct: 2187 IVVGDTKDNKLYGIKRTSLNETNSVKLDIEAPSMKGKHELTLYVVSDSYVSTDYQYKLEL 2246
Query: 428 EII 436
++
Sbjct: 2247 NVV 2249
>UniRef50_Q013J2 Cluster: RNA helicase; n=4; Viridiplantae|Rep: RNA
helicase - Ostreococcus tauri
Length = 2138
Score = 39.9 bits (89), Expect = 0.038
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVPPRGTAQLTFYTPS----RTGRIIYTVYIMSDSY 394
P +E G + +G + EL AL+R+ A + P R R VY++SDSY
Sbjct: 2027 PKIKEEGWWVIVGDTANNELLALRRISFGDRADVKLKCPPSASPRPRRQTLAVYVVSDSY 2086
Query: 395 MGLDQQYDLQFEIIDAMPSENVDKVYDT 478
+GLDQ+ + + + + VD DT
Sbjct: 2087 IGLDQEILINADDFVEVSDDEVDDNADT 2114
>UniRef50_Q9XWI5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1798
Score = 38.3 bits (85), Expect = 0.12
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 311 RGTAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEI 433
R TA+L P+ G V I+SD Y+G+DQ+Y L+ ++
Sbjct: 1757 RSTAKLDIRAPATKGNHELAVLILSDCYLGIDQEYTLRLDV 1797
>UniRef50_Q4RRA3 Cluster: Chromosome 14 SCAF15003, whole genome
shotgun sequence; n=3; Percomorpha|Rep: Chromosome 14
SCAF15003, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 880
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 323 QLTFYTPSRTGRIIYTVYIMSDSYMGLDQ 409
+L F PS+TG Y+V + SDSY+GLDQ
Sbjct: 768 ELKFPAPSKTGNYQYSVILRSDSYLGLDQ 796
>UniRef50_Q9VS57 Cluster: CG8583-PA; n=7; Endopterygota|Rep:
CG8583-PA - Drosophila melanogaster (Fruit fly)
Length = 753
Score = 37.9 bits (84), Expect = 0.15
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 323 QLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEI 433
QL F P G +TV + SDSY+G+DQQ +L+ ++
Sbjct: 674 QLKFTAPRWPGVYTFTVCLRSDSYLGMDQQQELKLDV 710
>UniRef50_Q7REE9 Cluster: Putative uncharacterized protein PY05116;
n=1; Plasmodium yoelii yoelii|Rep: Putative
uncharacterized protein PY05116 - Plasmodium yoelii
yoelii
Length = 1373
Score = 37.5 bits (83), Expect = 0.20
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 317 TAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMPSENV 460
T ++ F P + G +Y++SDSY+G DQ+Y+ + D E V
Sbjct: 1286 TVKVNFELPDKPGTYDIVMYLVSDSYIGCDQEYEFAMVVSDCFFCEVV 1333
>UniRef50_UPI00015B6174 Cluster: PREDICTED: similar to SEC63
protein, putative; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to SEC63 protein, putative - Nasonia
vitripennis
Length = 763
Score = 37.1 bits (82), Expect = 0.27
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +2
Query: 323 QLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMP 448
QL F P +TV + SDSY+G DQ +D++ ++ +A P
Sbjct: 684 QLRFTAPLWPNVYTFTVCLRSDSYLGFDQLHDIKLDVKEAAP 725
>UniRef50_Q55CI8 Cluster: DEAD/DEAH box helicase; n=3; Eukaryota|Rep:
DEAD/DEAH box helicase - Dictyostelium discoideum AX4
Length = 2237
Score = 37.1 bits (82), Expect = 0.27
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 260 LGTVDDGELHALKRVPPRGTAQLTFYTPS-RTGRIIYTVYIMSDSYMGLDQQYDLQFEII 436
+G + L A+KR+ ++ F P+ G+ ++Y+ SDSY G DQ+++L I+
Sbjct: 2159 IGDSKNNHLLAIKRITFLKKTKVKFEFPTPAVGKHQLSLYLFSDSYNGCDQEHELNINIL 2218
Query: 437 DA-MPSENVDKVYD 475
A + E+ D+ D
Sbjct: 2219 PAEIEDEDEDEEED 2232
>UniRef50_A7AM78 Cluster: Sec63 domain containing protein; n=1;
Babesia bovis|Rep: Sec63 domain containing protein -
Babesia bovis
Length = 2133
Score = 36.3 bits (80), Expect = 0.47
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 LTLGTVDDGELHALKRVPPRGTAQ---LTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQ 424
+ +G +D + +KRV + + F P++ G +VY++SDSY+G DQQ +
Sbjct: 2068 ILVGDLDSKRVLGIKRVTLLDSVNQVNIDFEAPNKLGSHELSVYVVSDSYVGTDQQQSIS 2127
Query: 425 FEI 433
+
Sbjct: 2128 LHV 2130
>UniRef50_Q4WRV7 Cluster: Protein translocation complex componenet
(Npl1), putative; n=13; Pezizomycotina|Rep: Protein
translocation complex componenet (Npl1), putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 697
Score = 36.3 bits (80), Expect = 0.47
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +2
Query: 317 TAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMPSENVDKVYDTIE 484
T ++ F P + G + +++M DSY+GLD + D+ + D + +++ D E
Sbjct: 587 TLKMQFQAPPQVGDFSFVMHMMCDSYLGLDTKLDITLHVDDPAKAAALEEEDDISE 642
>UniRef50_A5K663 Cluster: U5 small nuclear ribonucleoprotein-specific
protein, putative; n=4; Plasmodium|Rep: U5 small nuclear
ribonucleoprotein-specific protein, putative - Plasmodium
vivax
Length = 2675
Score = 35.9 bits (79), Expect = 0.62
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 323 QLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEI 433
+++F P + GR +Y+++D Y+G DQ+Y+ E+
Sbjct: 2637 KVSFELPDQPGRYDVVLYVINDCYVGCDQEYEFAMEV 2673
>UniRef50_A6QZE8 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized
protein - Ajellomyces capsulatus NAm1
Length = 1597
Score = 35.9 bits (79), Expect = 0.62
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 227 PARQERGLVLTLGTVDDGELHALKRVPPRGTAQLTF-YTPSRTGRIIYTVYIMSDSYMGL 403
P ++ L +G L A KR+ R QL Y G T+++MSDSY+G+
Sbjct: 1512 PGQKMENWWLVVGEEKTNSLLATKRITIRKKLQLKLEYIVPTPGEHELTLFLMSDSYVGV 1571
Query: 404 DQQYDLQFEIIDAMPSENVDK 466
DQ + + M + ++
Sbjct: 1572 DQDPSFKITAAEGMDEDEEEE 1592
>UniRef50_Q9UT24 Cluster: Pre-mRNA-splicing factor brr2; n=4;
Eukaryota|Rep: Pre-mRNA-splicing factor brr2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 2176
Score = 35.9 bits (79), Expect = 0.62
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 272 DDGELHALKRVP-PRGTAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMP 448
DD L A+K++ R + P G + Y + SDSYMG+D + + + +++ +
Sbjct: 2110 DDKTLLAIKKITLGRSLTTKMEFVPPAMGTLKYKLSCFSDSYMGVDYEKEFECNVLEPLD 2169
Query: 449 SENVD 463
+E D
Sbjct: 2170 TEMED 2174
>UniRef50_Q54G57 Cluster: DEAD/DEAH box helicase; n=1; Dictyostelium
discoideum AX4|Rep: DEAD/DEAH box helicase -
Dictyostelium discoideum AX4
Length = 2195
Score = 34.3 bits (75), Expect = 1.9
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +2
Query: 236 QERGLVLTLGTVDDGELHALKRVPPRGTAQLT--FYTPSRT--GRIIYTVYIMSDSYMGL 403
++ G ++ L T + ++ KRVP + +T F P Y V + SD+YMGL
Sbjct: 2099 KDEGWIMVL-TDEKEQMIGFKRVPQMISNSVTANFKIPKAPFQSSTNYNVKLYSDTYMGL 2157
Query: 404 DQQYDLQFEIIDAMPSENVDKVYDTI 481
D + Q I++ N D+ DTI
Sbjct: 2158 DYFHTFQVPIVNKKQIRNDDQDGDTI 2183
>UniRef50_A0CXW7 Cluster: Chromosome undetermined scaffold_30, whole
genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_30, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2116
Score = 34.3 bits (75), Expect = 1.9
Identities = 22/70 (31%), Positives = 37/70 (52%)
Frame = +2
Query: 215 MSEIPARQERGLVLTLGTVDDGELHALKRVPPRGTAQLTFYTPSRTGRIIYTVYIMSDSY 394
+ ++ ++E L LG +D + +K+V + TA T Y +Y+MSDSY
Sbjct: 2051 IQKLNKQREASWWLILG--EDDRIVQMKKVYLKSTASKDLDVEGWTRH--YKLYLMSDSY 2106
Query: 395 MGLDQQYDLQ 424
+GLDQ D++
Sbjct: 2107 LGLDQIIDIK 2116
>UniRef50_A2QAX0 Cluster: Complex: S. cerevisiae Sec63p is subunit
of the ER translocon; n=1; Aspergillus niger|Rep:
Complex: S. cerevisiae Sec63p is subunit of the ER
translocon - Aspergillus niger
Length = 653
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 317 TAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMPSENVDKVYDTIE 484
T ++ F P + G + + ++ DSY+GLD + ++ I D + +D+ D E
Sbjct: 542 TLKMQFQAPPQVGDFTFVLNMLCDSYLGLDTKMEITLHIDDPAKAAALDEEDDISE 597
>UniRef50_UPI0000D56550 Cluster: PREDICTED: similar to CG5205-PA,
partial; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG5205-PA, partial - Tribolium castaneum
Length = 666
Score = 33.9 bits (74), Expect = 2.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 341 PSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIID 439
P G Y Y MSDSY+GLDQ+ + ++D
Sbjct: 634 PGERGVYEYAGYFMSDSYIGLDQKVTFKVTVVD 666
>UniRef50_A6VTG8 Cluster: Polysaccharide biosynthesis protein CapD;
n=24; Proteobacteria|Rep: Polysaccharide biosynthesis
protein CapD - Marinomonas sp. MWYL1
Length = 659
Score = 33.9 bits (74), Expect = 2.5
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2
Query: 293 LKRVPPRGTAQLTFYTPSRTGRIIYTVYIMSDSYMG---LDQQYDLQFEIIDAMPSENVD 463
L + P +G+ + + TGR + + SY +D+ L II +P NVD
Sbjct: 137 LTQAPQKGSESVLVFGAGSTGRQLTLALRQASSYRVKGFIDRDESLANTIIQGVPVYNVD 196
Query: 464 KVYDTIEKTLIE 499
K+ + IEK IE
Sbjct: 197 KIGELIEKYDIE 208
>UniRef50_A2XDW7 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 1897
Score = 33.1 bits (72), Expect = 4.4
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 218 SEIPARQERGLVLTLGTVDDGELHALKRVPPRGTAQLT-FYTPSRTGRIIYTVYIMSDSY 394
SE+ ++ L LG + EL+ LKR+ T P+ + ++SDSY
Sbjct: 1822 SELYQAKQEAWWLVLGNIRSSELYGLKRINFMDRVVNTRMELPAMFDIQETKLILVSDSY 1881
Query: 395 MGLDQQYDL 421
+G DQ+Y L
Sbjct: 1882 LGFDQEYSL 1890
>UniRef50_Q7QVE3 Cluster: GLP_542_7991_6993; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_542_7991_6993 - Giardia lamblia ATCC
50803
Length = 332
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = -2
Query: 516 YFKQNHSINVFSIVSYTLSTFSDGIASIISNCKSYCWSK--PM*LSLIIYTVYIIRPVRE 343
YFK HS+ + SY+L T+ D + I+ C C + P+ ++ IY RP
Sbjct: 54 YFKMRHSVLLEIFPSYSLGTYMDSLV-IVFLCPMECAASALPVYSTVSIYVCKTARPAES 112
Query: 342 GV 337
G+
Sbjct: 113 GL 114
>UniRef50_Q235I9 Cluster: Type III restriction enzyme, res subunit
family protein; n=2; Eukaryota|Rep: Type III restriction
enzyme, res subunit family protein - Tetrahymena
thermophila SB210
Length = 2678
Score = 33.1 bits (72), Expect = 4.4
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 260 LGTVDDGELHALKRV----PPRGTAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQF 427
+G G+LHALK++ + Q+ T + + TV+++SDSY+GLDQ + L
Sbjct: 2180 IGDEYTGKLHALKKIFFKKNLKKDIQIILPESFETSKKL-TVFLVSDSYLGLDQVFYLNL 2238
Query: 428 EIIDAMPSE 454
D E
Sbjct: 2239 RSKDQKADE 2247
>UniRef50_A4RJ20 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 509
Score = 33.1 bits (72), Expect = 4.4
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 284 LHALKRVP-PRGTAQLTFYTPSRTGRIIYTVYIMSDSYMGLDQQYDLQFEIIDAMPSE 454
L A KR+ P G + + RT +IYT+Y+ D + G ++ DL E I +P++
Sbjct: 109 LDAYKRIATPNGVDEFQWIDGYRTDELIYTLYMGKDGFQGC-RRSDLVDEWIKTLPAD 165
>UniRef50_Q4QGA4 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative - Leishmania
major
Length = 1985
Score = 32.7 bits (71), Expect = 5.8
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 11/65 (16%)
Frame = +2
Query: 254 LTLGTVDDGELHALKRVP---PRGTAQLTF--------YTPSRTGRIIYTVYIMSDSYMG 400
+ +G GEL ALKRV TA L Y+P G + VY++ DSY+G
Sbjct: 1915 VVVGHEPTGELVALKRVNRLRQSSTATLRIDWDEDWVQYSPD--GTVELNVYLVCDSYIG 1972
Query: 401 LDQQY 415
+DQQY
Sbjct: 1973 MDQQY 1977
>UniRef50_A5JZH6 Cluster: Translocation protein SEC63, putative;
n=5; Plasmodium|Rep: Translocation protein SEC63,
putative - Plasmodium vivax
Length = 720
Score = 32.7 bits (71), Expect = 5.8
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 347 RTGRIIYTVYIMSDSYMGLDQQYDLQF 427
R G + ++YI+SD Y G D++ DL F
Sbjct: 537 RVGNLCVSIYILSDCYFGCDKKLDLPF 563
>UniRef50_Q3JS13 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 1710b|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 1710b)
Length = 1212
Score = 32.3 bits (70), Expect = 7.6
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 220 RDSRAARTRAGSDARHRGRWRVAR--LETGPA*RNGTA 327
R RAAR RA DARH R R AR + PA R G A
Sbjct: 307 RSGRAARERARRDARHGARHRAARGVRQPEPARRRGGA 344
>UniRef50_Q2W783 Cluster: Tungsten-containing aldehyde ferredoxin
oxidoreductase; n=4; Bacteria|Rep: Tungsten-containing
aldehyde ferredoxin oxidoreductase - Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264)
Length = 569
Score = 32.3 bits (70), Expect = 7.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 209 RAMSEIPARQERGLVLTLGTVDDGELHALKRVPPRGTAQLTFYTP 343
+A+++I A ERG +L GT GE + ++RVP ++ Y P
Sbjct: 378 QALADIGAGNERGRLLAQGTARVGEHYGVRRVPVIKKQAISAYDP 422
>UniRef50_Q4Q7J3 Cluster: DREV methyltransferase, putative; n=6;
Trypanosomatidae|Rep: DREV methyltransferase, putative -
Leishmania major
Length = 271
Score = 32.3 bits (70), Expect = 7.6
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 66 RGLWFDADHEQDKRITQPPARDQWMPLHADQEYTLLLDMQRRGGNPNNVLCPRFPR 233
RG+ F EQ +R+ +PP PL +D ++ LLD+ G + P F +
Sbjct: 83 RGMMFVYSTEQIRRLLRPPQAPLTSPLPSDFQFDSLLDIGAGDGGVTANIAPLFKK 138
>UniRef50_Q6FWX7 Cluster: Similar to sp|P43614 Saccharomyces
cerevisiae YFR042w; n=1; Candida glabrata|Rep: Similar
to sp|P43614 Saccharomyces cerevisiae YFR042w - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 197
Score = 32.3 bits (70), Expect = 7.6
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +1
Query: 28 YATYQLRT*SCTSAVYGSTLIMNKTNGSRNLPPGISGCLCMLI 156
+ YQL+T A++G L++ GSR LP GI LC L+
Sbjct: 7 FQLYQLQTTLLYLALFGRWLVLMPLVGSRYLPGGIHEYLCYLL 49
>UniRef50_Q2URT5 Cluster: RNA helicase BRR2; n=33; Eukaryota|Rep: RNA
helicase BRR2 - Aspergillus oryzae
Length = 2210
Score = 32.3 bits (70), Expect = 7.6
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 254 LTLGTVDDGELHALKRVPPRGTAQLTF-YTPSRTGRIIYTVYIMSDSYMGLDQ 409
L +G L A+KRV +L Y G T+Y+MSDSY+G+DQ
Sbjct: 2135 LVVGDEKTKSLLAIKRVTVGRKLELRLEYIVPTPGEHELTLYLMSDSYVGVDQ 2187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 546,045,353
Number of Sequences: 1657284
Number of extensions: 11234362
Number of successful extensions: 28753
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 27973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28739
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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