Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30208
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   1.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   3.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.4  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 444 IASIISNCKSYCWS 403
           + SI+ NC SYC++
Sbjct: 276 VLSIVKNCLSYCFN 289


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 444 IASIISNCKSYCWS 403
           + SI+ NC SYC++
Sbjct: 276 VLSIVKNCLSYCFN 289


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 286 QLSIVHGAERQNQPSFLPRG 227
           +L I+HG E ++ P F  RG
Sbjct: 201 ELRILHGVEIRDYPKFPYRG 220


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 262 ERQNQPSFLPRGN 224
           +R  +P+F+P+GN
Sbjct: 12  DRPQEPAFMPKGN 24


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 490  CFFNSVIHFIYVFRRHCIYYF 428
            CFF S I   +    +C+Y F
Sbjct: 1115 CFFPSKIRICWNVLLNCVYLF 1135


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 484 KNINRMILFKINYLY 528
           KN+  ++LF IN LY
Sbjct: 97  KNLYYLLLFVINVLY 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,533
Number of Sequences: 336
Number of extensions: 2827
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)