Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30207
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 169 4e-41
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 148 1e-34
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 137 2e-31
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 124 2e-27
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 115 1e-24
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 107 2e-22
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 100 6e-20
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 97 2e-19
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 93 7e-18
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 90 4e-17
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 89 8e-17
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 81 2e-14
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 77 4e-13
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 75 1e-12
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 71 2e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 71 2e-11
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 70 6e-11
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 67 3e-10
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 62 1e-08
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 60 3e-08
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 50 5e-05
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 50 5e-05
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 49 1e-04
UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga... 49 1e-04
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 48 3e-04
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 48 3e-04
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 3e-04
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 46 8e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 46 0.001
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 39 0.12
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 38 0.21
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.21
UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2; ... 38 0.21
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A0TWY6 Cluster: LigA; n=1; Burkholderia cenocepacia MC0... 34 3.4
UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed; ... 33 4.5
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 5.9
UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome s... 33 7.8
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 7.8
UniRef50_A0GFH1 Cluster: Major facilitator superfamily MFS_1; n=... 33 7.8
UniRef50_Q4ZDD0 Cluster: ORF004; n=26; root|Rep: ORF004 - Staphy... 33 7.8
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 169 bits (412), Expect = 4e-41
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
RVRKNTEARRKGRHCGFGKR+GT
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGT 84
Score = 119 bits (287), Expect = 5e-26
Identities = 58/88 (65%), Positives = 63/88 (71%)
Frame = +2
Query: 245 KRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 424
K NARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY
Sbjct: 82 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 141
Query: 425 IHRKKAEKARTKMLSDQAEARRNKVKEA 508
IH+KKAEK R+KML+DQAEARR KV+EA
Sbjct: 142 IHKKKAEKQRSKMLADQAEARRQKVREA 169
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 148 bits (359), Expect = 1e-34
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 2e-24
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 137 bits (331), Expect = 2e-31
Identities = 62/76 (81%), Positives = 68/76 (89%)
Frame = +3
Query: 27 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 206
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 207 ARRKGRHCGFGKRRGT 254
ARRKGRH G GKR+GT
Sbjct: 61 ARRKGRHMGIGKRKGT 76
Score = 102 bits (244), Expect = 9e-21
Identities = 48/90 (53%), Positives = 60/90 (66%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 123
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEA 484
FKNKR+LME+IH+ KA+KAR K+L+DQAEA
Sbjct: 124 FKNKRILMEHIHKLKADKARKKLLADQAEA 153
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 124 bits (298), Expect = 2e-27
Identities = 56/84 (66%), Positives = 67/84 (79%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
+R RKN ARRKGRH G GKR+GT
Sbjct: 61 SRCRKNLIARRKGRHTGTGKRKGT 84
Score = 98.3 bits (234), Expect = 1e-19
Identities = 48/101 (47%), Positives = 63/101 (62%)
Frame = +2
Query: 245 KRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 424
K +ARMPQK LW A KID+HLYH LY + KGN FKNKRVL+++
Sbjct: 82 KGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLIDH 141
Query: 425 IHRKKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRR 547
IH+KKAE+ R K LSDQAEA R + +E+ ++ L R++
Sbjct: 142 IHKKKAERLRAKQLSDQAEAMRQRKRESRVNRQHRLEERKK 182
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 115 bits (276), Expect = 1e-24
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RK EA+ GRH G G+R G+
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRREGS 104
Score = 81.8 bits (193), Expect = 1e-14
Identities = 39/88 (44%), Positives = 54/88 (61%)
Frame = +2
Query: 260 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 439
ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR L+E+IH+ K
Sbjct: 107 ARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVEHIHKIK 166
Query: 440 AEKARTKMLSDQAEARRNKVKEAASAAR 523
EK + + L++Q A+ + ++ + AR
Sbjct: 167 NEKKKERQLAEQLAAKHLRDEQNRNKAR 194
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 107 bits (257), Expect = 2e-22
Identities = 55/84 (65%), Positives = 63/84 (75%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
A KNT KGRH GK +GT
Sbjct: 61 AHCEKNT---LKGRHMVIGKGKGT 81
Score = 80.2 bits (189), Expect = 4e-14
Identities = 42/123 (34%), Positives = 66/123 (53%)
Frame = +2
Query: 203 RST*KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 382
++T KG + + K N +P++ W +KKID H+ HSLY++
Sbjct: 65 KNTLKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRV 124
Query: 383 KGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRRNCCRP 562
K NVFKN+ +LME IH+ KA+KA K+L+DQ + + +K K+A +P R+ P
Sbjct: 125 KRNVFKNQWILMEQIHKPKADKACKKLLADQGDVQSSKSKDAQKLREEQVPTRQHKFQFP 184
Query: 563 SLE 571
L+
Sbjct: 185 FLK 187
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 99.5 bits (237), Expect = 6e-20
Identities = 48/81 (59%), Positives = 55/81 (67%)
Frame = +2
Query: 260 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 439
AR+P K LW AKKID+H+YHS+Y+K KGNVFKNKRVLME IH+ K
Sbjct: 107 ARLPTKVLWLRRHRVLRRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLMEAIHKSK 166
Query: 440 AEKARTKMLSDQAEARRNKVK 502
AEKAR K L+DQ EARR K K
Sbjct: 167 AEKAREKSLADQFEARRAKNK 187
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 20/104 (19%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 167
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 168 ---------------AVHSRARVRKNTEARRKGRHCGFGKRRGT 254
+HSRAR + A+R GRH G+GKRRGT
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRRGT 104
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 97.5 bits (232), Expect = 2e-19
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
R+R E + GRH G GKR+G+
Sbjct: 61 NRIRSRKEEIKLGRHEGLGKRKGS 84
Score = 68.9 bits (161), Expect = 1e-10
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 257 NARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 436
N+R K +W + K++RHLY SLY+K+KGNVFKNK++L E+IH+
Sbjct: 86 NSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTEFIHKA 145
Query: 437 KAEKARTKMLSDQAEARRNKVK 502
K E+ R + D+ + R K K
Sbjct: 146 KNEQKRKEEFLDKFKLMREKKK 167
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 92.7 bits (220), Expect = 7e-18
Identities = 36/83 (43%), Positives = 63/83 (75%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRG 251
R R E ++KGRH G G R+G
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKG 83
Score = 46.0 bits (104), Expect = 8e-04
Identities = 28/86 (32%), Positives = 35/86 (40%)
Frame = +2
Query: 197 KHRST*KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 376
+H KG K ARM +KELW KKIDR Y LY+
Sbjct: 66 RHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYI 125
Query: 377 KAKGNVFKNKRVLMEYIHRKKAEKAR 454
+AKG FK+K L ++ K R
Sbjct: 126 RAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 90.2 bits (214), Expect = 4e-17
Identities = 47/110 (42%), Positives = 65/110 (59%)
Frame = +2
Query: 179 PRSCPQKHRST*KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHL 358
P S +KH +G + E+ NARM +K W +KKIDR +
Sbjct: 515 PGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRESKKIDRRM 574
Query: 359 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ EARR+K K+A
Sbjct: 575 YHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQTEARRSKTKKA 624
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 89.0 bits (211), Expect = 8e-17
Identities = 40/84 (47%), Positives = 58/84 (69%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
R RK EA++KGRH G GKR GT
Sbjct: 61 GRCRKRLEAKKKGRHMGTGKRFGT 84
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +2
Query: 257 NARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 436
NARMPQK++W +I + + Y +AKG++FK++ + + I ++
Sbjct: 86 NARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRVFYKQAKGHLFKHRFHMKDCIIKR 145
Query: 437 KAEKARTKMLSDQAEA 484
KA++ R K L++QA+A
Sbjct: 146 KADEQRAKELAEQAKA 161
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 81.0 bits (191), Expect = 2e-14
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
R+R A+R GRH G GKRRGT
Sbjct: 61 GRIRARHAAKRLGRHSGHGKRRGT 84
Score = 72.9 bits (171), Expect = 6e-12
Identities = 36/82 (43%), Positives = 47/82 (57%)
Frame = +2
Query: 260 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 439
ARMP K LW +KIDRHLY +LY KAKGN+FKNKRVL+E+I +
Sbjct: 87 ARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLEHIVGMQ 146
Query: 440 AEKARTKMLSDQAEARRNKVKE 505
E+ K ++ E RR K ++
Sbjct: 147 KEQELEKKKKEELEQRRKKAEQ 168
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 77.0 bits (181), Expect = 4e-13
Identities = 33/80 (41%), Positives = 55/80 (68%)
Frame = +3
Query: 12 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 191
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 192 RKNTEARRKGRHCGFGKRRG 251
+K E R+KGR G G RRG
Sbjct: 66 KKLKEQRKKGRRRGPGSRRG 85
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 260 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKK 439
AR P KE W + KIDR +Y LY AKG F+++ L Y+ +
Sbjct: 89 ARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMREHE 148
Query: 440 AEK 448
K
Sbjct: 149 LLK 151
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 74.9 bits (176), Expect = 1e-12
Identities = 31/77 (40%), Positives = 52/77 (67%)
Frame = +3
Query: 21 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 200
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 201 TEARRKGRHCGFGKRRG 251
E ++KGR G G R+G
Sbjct: 66 HEKKKKGRRRGPGSRKG 82
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +2
Query: 260 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRK 436
AR K W K ID Y LY K KGN+FK++ L+ Y+ +K
Sbjct: 86 ARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLYLKQK 144
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +3
Query: 27 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 197
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/80 (46%), Positives = 50/80 (62%)
Frame = +3
Query: 15 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 194
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 195 KNTEARRKGRHCGFGKRRGT 254
T ARR+G H G KR+GT
Sbjct: 90 --TLARRRGWHMGIRKRKGT 107
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Frame = +2
Query: 344 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQAEARR K KEA
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQAEARRCKTKEA 164
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/83 (37%), Positives = 50/83 (60%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRG 251
R R E R G G G R+G
Sbjct: 61 GRARSRAEKRAYGHRKGPGSRKG 83
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Frame = +2
Query: 332 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEAA 511
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ QAEARR+K +EA
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQAEARRSKTEEAH 117
Query: 512 SAARNVLPPRRRNCCR--PSLEKTKPRLPLRSKHYVVNN 622
L ++ K + +LPL + ++ +
Sbjct: 118 KGCEERLQAKKEEIIETVQGGRKQEIKLPLFGREPIIED 156
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRG 251
R R+ G G G R+G
Sbjct: 61 GRARERDAKESYGHKKGAGSRKG 83
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/77 (37%), Positives = 47/77 (61%)
Frame = +3
Query: 24 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 203
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 204 EARRKGRHCGFGKRRGT 254
E KGR G G RGT
Sbjct: 67 EQLAKGRRRGEGSVRGT 83
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Frame = +3
Query: 21 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
+R RK + KGR G G R+G+
Sbjct: 66 SRARKAAAQKAKGRRSGQGSRKGS 89
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 50.0 bits (114), Expect = 5e-05
Identities = 36/94 (38%), Positives = 46/94 (48%)
Frame = -3
Query: 451 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 272
GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL + + L
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRHRILILLIQVTFS 124
Query: 271 WHTRIGVPLLLPKPQ*RPFLRASVFLRTRARECT 170
+ VP L P PF R+ VF R RARE T
Sbjct: 125 GIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Frame = +3
Query: 15 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 188
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 189 VRKNTEARRKGRHCGFGKRRG 251
+ RRKGR G G+R+G
Sbjct: 64 SKVRHLQRRKGRRRGMGRRKG 84
Score = 35.9 bits (79), Expect = 0.84
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = +2
Query: 197 KHRST*KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 376
+H KG + K AR+ KE W + IDR Y LYM
Sbjct: 67 RHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYM 126
Query: 377 KAKGNVFKNKRVLMEYI 427
AKG F++ L Y+
Sbjct: 127 LAKGGTFRDLASLKRYM 143
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 48.8 bits (111), Expect = 1e-04
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -3
Query: 505 LLHFIAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSV 326
LL +AA L L+ L LL L DVL E+ L+LEH+TL L +E ++ +P++L +V
Sbjct: 63 LLCLLAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGLIKVPIDLFVVTV 122
Query: 325 LQEQFS*NPLSLYP*FLLWHTRI 257
+Q + + L+L P L HT +
Sbjct: 123 PAQQATEDTLALNPESLRRHTSL 145
>UniRef50_A3H8Q7 Cluster: Ribosomal protein L19e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L19e -
Caldivirga maquilingensis IC-167
Length = 158
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/77 (29%), Positives = 41/77 (53%)
Frame = +3
Query: 24 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 203
+ A ++ K ++ + + ++ +R ++R ++K+GL+ KP +SR R R
Sbjct: 4 RETVARLLNVPKSRIVIKQEALEQLEEAITRNDVRSLMKEGLIEVKPRKRNSRGRWRITH 63
Query: 204 EARRKGRHCGFGKRRGT 254
E R+ GR G G RRGT
Sbjct: 64 EKRKSGRRRGRGSRRGT 80
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/82 (26%), Positives = 45/82 (54%)
Frame = +3
Query: 9 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 188
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 189 VRKNTEARRKGRHCGFGKRRGT 254
+ ++ G G G+R+GT
Sbjct: 62 KKLRKAKKQSGLKRGIGRRKGT 83
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/76 (30%), Positives = 39/76 (51%)
Frame = +3
Query: 24 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 203
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 204 EARRKGRHCGFGKRRG 251
++KGR G G R+G
Sbjct: 65 IKKKKGRRRGHGSRKG 80
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 9 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 188
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 189 VR-KNTEARRKGRHCG 233
+ K + ++G G
Sbjct: 64 AQHKRRQKAKRGSKAG 79
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 46.0 bits (104), Expect = 8e-04
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 179
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 180 RARVRKNTEARR-KGRHCGFGKRRG 251
R+++ + R K G R+G
Sbjct: 60 GGRLKERRKKRSLKSEGKKSGSRKG 84
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 260 ARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 400
AR K++W K IDRH Y LY+K KG +K
Sbjct: 88 ARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 338 KKIDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 448
KKID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 54 KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 30 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 161
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2
Query: 164 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 48
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/81 (28%), Positives = 42/81 (51%)
Frame = +3
Query: 9 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 188
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 189 VRKNTEARRKGRHCGFGKRRG 251
+ +A+R R G ++G
Sbjct: 64 A-QTKKAQRNKRGTKQGSKQG 83
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/54 (37%), Positives = 31/54 (57%)
Frame = -2
Query: 251 TSSLTKATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLI 90
T L A + L + VF+ S G+ ++ LDD+ I D ++D+L GVG+ D I
Sbjct: 110 TLPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFI 163
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 37.9 bits (84), Expect = 0.21
Identities = 23/52 (44%), Positives = 29/52 (55%)
Frame = +2
Query: 374 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEAASAARNV 529
MK KGN+ NKR + +AEKAR + LSDQ EA+ K AS R +
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAK--LAKSMASQERKI 50
>UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 659
Score = 37.9 bits (84), Expect = 0.21
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -2
Query: 314 IFLKPFVFVPIVPSVAYAHWCTSSLTKATVTT-LSTCFCVFADTSAGVYCYRFLDDETIL 138
IF++PF IV + W L A + ++T FC+FAD S + R DD+ +
Sbjct: 402 IFIEPFFVNMIVTDDTFTDWRNCFLAHAGLLLFVNTIFCLFADASPAKWT-RLQDDDVAI 460
Query: 137 DHLTDVLSGVGVCDLIDFI 81
+ + SG + D+I F+
Sbjct: 461 EEEKEEYSG-SIEDIIKFL 478
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.5
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +3
Query: 21 QKRLAASVMRCGKKKVWLDPNEINEIAN 104
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_A0TWY6 Cluster: LigA; n=1; Burkholderia cenocepacia
MC0-3|Rep: LigA - Burkholderia cenocepacia MC0-3
Length = 664
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 434 KKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRRNCCRPSLEKTKPRLPLRSKH 607
++ E AR ++ RR V AA AAR PPRR +P P R++H
Sbjct: 185 RQPEPARLRIPEQAPRRRRRDVLRAARAARRTAPPRRVREQGSRAAPRRPARPRRARH 242
>UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed;
n=6; Oryza sativa|Rep: Spc97/Spc98 family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1139
Score = 33.5 bits (73), Expect = 4.5
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 18 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 188
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 189 VRKNTEARRKGRHCGFG 239
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 172 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 53
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 340
Score = 32.7 bits (71), Expect = 7.8
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -2
Query: 236 KATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFI 81
KA VT+L C F+D V+C F TI+DH + G +C L+ FI
Sbjct: 62 KANVTSLFICNLSFSDILVCVFCLPFTVIYTIMDHW---VFGSLLCRLVPFI 110
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 493 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 374
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_A0GFH1 Cluster: Major facilitator superfamily MFS_1; n=2;
Burkholderiaceae|Rep: Major facilitator superfamily
MFS_1 - Burkholderia phytofirmans PsJN
Length = 411
Score = 32.7 bits (71), Expect = 7.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 317 AIFLKPFVFVPIVPSVAYAHWCTSS 243
AI L F + P++PS+ AHW TSS
Sbjct: 32 AIGLARFAYTPLIPSLIQAHWFTSS 56
>UniRef50_Q4ZDD0 Cluster: ORF004; n=26; root|Rep: ORF004 -
Staphylococcus phage 85
Length = 632
Score = 32.7 bits (71), Expect = 7.8
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 377 KAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEAASAARN 526
KA N+FKN+ L+ I + K+R K++ D A V++++ A N
Sbjct: 350 KALLNIFKNREKLLNSITKPTVTKSRIKVMVDNKNADIANVRDSSPTANN 399
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,010,666
Number of Sequences: 1657284
Number of extensions: 11793212
Number of successful extensions: 36649
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 35182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36594
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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