Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30207
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 148 1e-35
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 148 1e-35
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 148 1e-35
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 148 1e-35
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 148 1e-35
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 148 1e-35
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 148 1e-35
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 148 1e-35
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 148 1e-35
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 117 3e-26
BC110624-1|AAI10625.1| 664|Homo sapiens zinc finger protein 800... 30 6.1
BC110623-1|AAI10624.1| 664|Homo sapiens zinc finger protein 800... 30 6.1
AF218032-1|AAG17274.1| 337|Homo sapiens unknown protein. 30 6.1
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRKGT 93
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 81 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 140
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 141 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 178
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 148 bits (359), Expect = 1e-35
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254
AR RKNT ARRKGRH G GKR+GT
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGT 84
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 169
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 117 bits (282), Expect = 3e-26
Identities = 53/65 (81%), Positives = 57/65 (87%)
Frame = +3
Query: 60 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 239
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 240 KRRGT 254
KR+GT
Sbjct: 61 KRKGT 65
Score = 114 bits (274), Expect = 3e-25
Identities = 54/98 (55%), Positives = 67/98 (68%)
Frame = +2
Query: 215 KGSSLWLW*EKRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 394
KG + + K NARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 53 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 112
Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEA 508
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K KEA
Sbjct: 113 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEA 150
>BC110624-1|AAI10625.1| 664|Homo sapiens zinc finger protein 800
protein.
Length = 664
Score = 30.3 bits (65), Expect = 6.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 428 HRKKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRRNC 553
H +K K + + L E R+N + + ++NVL P R+C
Sbjct: 248 HIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSC 289
>BC110623-1|AAI10624.1| 664|Homo sapiens zinc finger protein 800
protein.
Length = 664
Score = 30.3 bits (65), Expect = 6.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 428 HRKKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRRNC 553
H +K K + + L E R+N + + ++NVL P R+C
Sbjct: 248 HIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSC 289
>AF218032-1|AAG17274.1| 337|Homo sapiens unknown protein.
Length = 337
Score = 30.3 bits (65), Expect = 6.1
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 428 HRKKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRRNC 553
H +K K + + L E R+N + + ++NVL P R+C
Sbjct: 248 HIRKVHKKKMEELKKYIETRKNPNQSSKGRSKNVLVPLSRSC 289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,874,432
Number of Sequences: 237096
Number of extensions: 1894250
Number of successful extensions: 4079
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4069
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -