BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30207 (645 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 169 2e-42 AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 169 2e-42 AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 169 2e-42 AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 169 2e-42 X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 167 1e-41 AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P... 31 1.3 AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-P... 29 4.1 L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 7.1 BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro... 29 7.1 AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 7.1 AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 7.1 AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA... 29 7.1 >BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p protein. Length = 208 Score = 169 bits (412), Expect = 2e-42 Identities = 78/84 (92%), Positives = 82/84 (97%) Frame = +3 Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182 MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65 Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254 RVRKNTEARRKGRHCGFGKR+GT Sbjct: 66 YRVRKNTEARRKGRHCGFGKRKGT 89 Score = 119 bits (287), Expect = 3e-27 Identities = 58/88 (65%), Positives = 63/88 (71%) Frame = +2 Query: 245 KRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 424 K NARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY Sbjct: 87 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 146 Query: 425 IHRKKAEKARTKMLSDQAEARRNKVKEA 508 IH+KKAEK R+KML+DQAEARR KV+EA Sbjct: 147 IHKKKAEKQRSKMLADQAEARRQKVREA 174 >AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p protein. Length = 221 Score = 169 bits (412), Expect = 2e-42 Identities = 78/84 (92%), Positives = 82/84 (97%) Frame = +3 Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182 MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78 Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254 RVRKNTEARRKGRHCGFGKR+GT Sbjct: 79 YRVRKNTEARRKGRHCGFGKRKGT 102 Score = 119 bits (287), Expect = 3e-27 Identities = 58/88 (65%), Positives = 63/88 (71%) Frame = +2 Query: 245 KRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 424 K NARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY Sbjct: 100 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 159 Query: 425 IHRKKAEKARTKMLSDQAEARRNKVKEA 508 IH+KKAEK R+KML+DQAEARR KV+EA Sbjct: 160 IHKKKAEKQRSKMLADQAEARRQKVREA 187 >AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB, isoform B protein. Length = 203 Score = 169 bits (412), Expect = 2e-42 Identities = 78/84 (92%), Positives = 82/84 (97%) Frame = +3 Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182 MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60 Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254 RVRKNTEARRKGRHCGFGKR+GT Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGT 84 Score = 119 bits (287), Expect = 3e-27 Identities = 58/88 (65%), Positives = 63/88 (71%) Frame = +2 Query: 245 KRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 424 K NARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY Sbjct: 82 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 141 Query: 425 IHRKKAEKARTKMLSDQAEARRNKVKEA 508 IH+KKAEK R+KML+DQAEARR KV+EA Sbjct: 142 IHKKKAEKQRSKMLADQAEARRQKVREA 169 >AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA, isoform A protein. Length = 203 Score = 169 bits (412), Expect = 2e-42 Identities = 78/84 (92%), Positives = 82/84 (97%) Frame = +3 Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182 MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60 Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254 RVRKNTEARRKGRHCGFGKR+GT Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGT 84 Score = 119 bits (287), Expect = 3e-27 Identities = 58/88 (65%), Positives = 63/88 (71%) Frame = +2 Query: 245 KRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 424 K NARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY Sbjct: 82 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 141 Query: 425 IHRKKAEKARTKMLSDQAEARRNKVKEA 508 IH+KKAEK R+KML+DQAEARR KV+EA Sbjct: 142 IHKKKAEKQRSKMLADQAEARRQKVREA 169 >X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein L19 protein. Length = 203 Score = 167 bits (405), Expect = 1e-41 Identities = 77/84 (91%), Positives = 81/84 (96%) Frame = +3 Query: 3 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 182 MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60 Query: 183 ARVRKNTEARRKGRHCGFGKRRGT 254 RVRKNTEARRK RHCGFGKR+GT Sbjct: 61 YRVRKNTEARRKDRHCGFGKRKGT 84 Score = 119 bits (287), Expect = 3e-27 Identities = 58/88 (65%), Positives = 63/88 (71%) Frame = +2 Query: 245 KRYTNARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 424 K NARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY Sbjct: 82 KGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 141 Query: 425 IHRKKAEKARTKMLSDQAEARRNKVKEA 508 IH+KKAEK R+KML+DQAEARR KV+EA Sbjct: 142 IHKKKAEKQRSKMLADQAEARRQKVREA 169 >AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA protein. Length = 1718 Score = 31.1 bits (67), Expect = 1.3 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -1 Query: 423 YSMSTRLFLNTLPFAFM*SEWYRCLSIFLAVLYFRSNFLKTLCLCTHSSFCGIRA 259 YS++ +L L +YR FL +++ NF TLC C +S FCG A Sbjct: 1321 YSIAQFRYLERLLLVHGRWSYYRMCK-FLRYFFYK-NFAFTLCHCWYSLFCGFSA 1373 >AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-PA protein. Length = 992 Score = 29.5 bits (63), Expect = 4.1 Identities = 14/50 (28%), Positives = 22/50 (44%) Frame = +2 Query: 434 KKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRRNCCRPSLEKTKP 583 K+A ++ T++LS + LPP+R+ C P L T P Sbjct: 776 KQAGRSITQLLSATHKRNTGGSLSGEQVQSTALPPKRQRSCGPRLSSTNP 825 >L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dynein heavy chian protein. Length = 4639 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 90 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 191 N++ TNSR IK GLV++ ++HS+ R+ Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137 >BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p protein. Length = 1312 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 90 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 191 N++ TNSR IK GLV++ ++HS+ R+ Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137 >AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB, isoform B protein. Length = 3388 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 90 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 191 N++ TNSR IK GLV++ ++HS+ R+ Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137 >AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA, isoform A protein. Length = 4639 Score = 28.7 bits (61), Expect = 7.1 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 90 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 191 N++ TNSR IK GLV++ ++HS+ R+ Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137 >AE013599-1757|AAF58345.1| 607|Drosophila melanogaster CG6209-PA protein. Length = 607 Score = 28.7 bits (61), Expect = 7.1 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 7/48 (14%) Frame = +2 Query: 431 RKKAEKARTKMLSDQA-------EARRNKVKEAASAARNVLPPRRRNC 553 +KK+++A K S+QA EA++NK +EA + R+++C Sbjct: 533 KKKSQEAEKKTKSEQAALQKKCAEAKKNKAREAEKKKKTAESERKKDC 580 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 27,487,667 Number of Sequences: 53049 Number of extensions: 573998 Number of successful extensions: 1926 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1852 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1921 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2724262200 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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