BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30207 (645 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.36 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 26 0.36 DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 24 1.1 DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.3 S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 22 5.8 AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 7.7 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 25.8 bits (54), Expect = 0.36 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 530 LPPRRRNCCRPSLEKTKPRLPLRSK 604 + PR++NCCR L K P RSK Sbjct: 393 MQPRKKNCCRSWLSK----FPTRSK 413 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 25.8 bits (54), Expect = 0.36 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 Query: 530 LPPRRRNCCRPSLEKTKPRLPLRSK 604 + PR++NCCR L K P RSK Sbjct: 393 MQPRKKNCCRSWLSK----FPTRSK 413 >DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein protein. Length = 250 Score = 24.2 bits (50), Expect = 1.1 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%) Frame = +2 Query: 419 EYIHRKKAEK----ARTKMLSDQAEA--RRNKVKEAASA--ARNVLPPRRRNCCRPSLEK 574 EYI R++ E A T + D +R K K++ + N L RR R LEK Sbjct: 11 EYIERREREAEHGYASTMPMPDDMRTVTKRPKTKKSQGSRTTHNELEKNRRAHLRNCLEK 70 Query: 575 TKPRLPL 595 K +PL Sbjct: 71 LKVLVPL 77 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 22.6 bits (46), Expect = 3.3 Identities = 8/22 (36%), Positives = 13/22 (59%) Frame = +2 Query: 2 DEFPQAAEEACSLCYAMW*KEG 67 DEF + + CSLC + ++G Sbjct: 264 DEFDEFGDSKCSLCQRRFEEQG 285 >S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. Length = 46 Score = 21.8 bits (44), Expect = 5.8 Identities = 8/23 (34%), Positives = 14/23 (60%) Frame = -1 Query: 357 RCLSIFLAVLYFRSNFLKTLCLC 289 RC+ +FL+V+ S F+ + C Sbjct: 6 RCIYLFLSVILITSYFVTPVMPC 28 >AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. Length = 652 Score = 21.4 bits (43), Expect = 7.7 Identities = 12/65 (18%), Positives = 30/65 (46%) Frame = +2 Query: 395 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVKEAASAARNVLPPRRRNCCRPSLEK 574 F + + ++E+++R + + ++ ++ S A + K+K + P + P E Sbjct: 83 FNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREP 142 Query: 575 TKPRL 589 PR+ Sbjct: 143 GTPRI 147 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 165,995 Number of Sequences: 438 Number of extensions: 3460 Number of successful extensions: 7 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 19438227 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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