BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30203 (657 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 82 3e-16 03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 81 8e-16 03_04_0031 - 16642947-16643864 31 1.1 01_05_0048 - 17561963-17563585 31 1.1 12_01_0924 + 9161155-9161646,9161748-9162164,9162250-9162313,916... 29 3.3 09_02_0347 + 7604466-7604622,7604809-7605146 29 3.3 06_03_0697 - 23621808-23622127,23622194-23622932,23623298-236233... 29 3.3 07_01_0510 - 3794793-3795047,3796005-3796295,3796850-3796906,379... 28 7.5 02_04_0612 + 24370446-24373044,24373135-24373541 28 7.5 11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895,361... 27 9.9 10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 27 9.9 07_01_1004 + 8500584-8501881,8502194-8502402,8503024-8503266,850... 27 9.9 01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 27 9.9 >10_08_0799 - 20650799-20650947,20651022-20651114,20651906-20651934, 20652039-20652097,20652170-20652283,20652374-20652534, 20652544-20652663,20652741-20653469,20654980-20655244 Length = 572 Score = 82.2 bits (194), Expect = 3e-16 Identities = 32/57 (56%), Positives = 51/57 (89%) Frame = +1 Query: 82 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLES 252 +I +NPQM+D++ RNP+++H+LN+P +LRQT+E ARNP +++E+MR+ DRA+SN+ES Sbjct: 194 MIMNNPQMRDIIDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAMSNIES 250 Score = 47.2 bits (107), Expect = 1e-05 Identities = 34/78 (43%), Positives = 40/78 (51%), Gaps = 22/78 (28%) Frame = +3 Query: 255 PGGYNALQRMYRDIQEPMLNVASSMAG------NPFSGLVDN-------SDGTN-PQQGS 392 P G+N L+RMY +QEP LN A++M G NPFS L+ N TN P GS Sbjct: 252 PEGFNMLRRMYETVQEPFLN-ATTMGGEGNTAPNPFSALLGNQGSNQPRDPATNAPNTGS 310 Query: 393 E--------NRQPLPNPW 422 E N PLPNPW Sbjct: 311 ESTTGTPAPNTNPLPNPW 328 Score = 35.5 bits (78), Expect = 0.037 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 82 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNL 246 L+ NP ++LM N ++ M NPE +RQ +P +Q+L+ LS L Sbjct: 426 LLNFNPNTRNLMESNTQLREMFQNPEFIRQ----LTSPETMQQLLSFQQTLLSQL 476 Score = 32.3 bits (70), Expect = 0.35 Identities = 9/25 (36%), Positives = 22/25 (88%) Frame = +2 Query: 5 NPDMLRQVLDNPLVQQMMNDPENMR 79 NP+++R++++ P++Q +MN+P+ +R Sbjct: 168 NPNLMREIMNMPMMQNLMNNPDLIR 192 Score = 29.9 bits (64), Expect = 1.9 Identities = 14/50 (28%), Positives = 27/50 (54%) Frame = +1 Query: 85 ITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRA 234 ++ NP + + P + +++NNP+L+R + NP M + R+ D A Sbjct: 165 LSQNPNLMREIMNMPMMQNLMNNPDLIRNM--IMNNPQMRDIIDRNPDLA 212 Score = 28.7 bits (61), Expect = 4.3 Identities = 14/48 (29%), Positives = 28/48 (58%) Frame = +2 Query: 512 PGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA*PEMAS*LINQDP 655 P + + QQ+S+NP L++ +++ P M+Q L P++ +I +P Sbjct: 156 PELDQMQQQLSQNPNLMREIMNMP----MMQNLMNNPDLIRNMIMNNP 199 >03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517, 1772689-1772747,1772816-1772929,1773030-1773238, 1773347-1774087,1775678-1776238,1776295-1776419, 1778187-1778317,1779020-1779178,1779471-1779728, 1780140-1780164,1780531-1780592,1780944-1781003, 1781112-1781219,1781703-1781838,1781880-1781929, 1782024-1782096,1782209-1782345,1782441-1782527, 1782624-1782721,1783259-1783369,1783685-1783769, 1783880-1783969 Length = 1259 Score = 81.0 bits (191), Expect = 8e-16 Identities = 31/57 (54%), Positives = 51/57 (89%) Frame = +1 Query: 82 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLES 252 +I +NPQM++++ RNP+++H+LN+P +LRQT+E ARNP +++E+MR+ DRA+SN+ES Sbjct: 895 IIMNNPQMREIVDRNPDLAHVLNDPSILRQTVEAARNPELMREMMRNTDRAMSNIES 951 Score = 44.4 bits (100), Expect = 8e-05 Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 22/78 (28%) Frame = +3 Query: 255 PGGYNALQRMYRDIQEPMLNVASSMAG------NPFSGLVDNSD--------GTNPQQGS 392 P G+N L+RMY +QEP LN A++MAG NPFS L+ N +P S Sbjct: 953 PEGFNMLRRMYETVQEPFLN-ATTMAGEGDRSSNPFSALLGNHGSNQARDPAANSPTTTS 1011 Query: 393 E--------NRQPLPNPW 422 E N PLPNPW Sbjct: 1012 ESTTGSPAPNTNPLPNPW 1029 Score = 36.3 bits (80), Expect = 0.021 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 1/92 (1%) Frame = +1 Query: 82 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESIQV 261 L+ NP ++++M N ++ M NPE +RQ +P LQ+L+ +S L Q Sbjct: 1103 LLNINPNVRNMMESNTQLREMFQNPEFVRQ----LTSPETLQQLISFQQSLMSQLGQQQA 1158 Query: 262 VTMRSKECIGT-YRNRCSMWPVAWQGTLSLDS 354 R++ G Y N + G +L++ Sbjct: 1159 GPERTQSGAGAEYFNGTTYESTLMPGNTNLNN 1190 Score = 30.3 bits (65), Expect = 1.4 Identities = 9/25 (36%), Positives = 20/25 (80%) Frame = +2 Query: 5 NPDMLRQVLDNPLVQQMMNDPENMR 79 NP ++R++++ PL+Q ++N P+ +R Sbjct: 869 NPTLMREIMNMPLMQNILNSPDLIR 893 Score = 27.9 bits (59), Expect = 7.5 Identities = 10/30 (33%), Positives = 20/30 (66%) Frame = +2 Query: 512 PGMQSLLQQMSENPRLVQSMVSSPYTNSML 601 P + + QQ+SENP L++ +++ P ++L Sbjct: 857 PELSQMQQQLSENPTLMREIMNMPLMQNIL 886 Score = 27.9 bits (59), Expect = 7.5 Identities = 14/50 (28%), Positives = 28/50 (56%) Frame = +1 Query: 85 ITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRA 234 ++ NP + + P + ++LN+P+L+R + NP M + + R+ D A Sbjct: 866 LSENPTLMREIMNMPLMQNILNSPDLIRNI--IMNNPQMREIVDRNPDLA 913 >03_04_0031 - 16642947-16643864 Length = 305 Score = 30.7 bits (66), Expect = 1.1 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +3 Query: 180 VGSQPRYVARVDALTRPRPLQSRKYPGGYNALQRMYRDIQEPMLNVAS 323 V ++P VARV L P Q R GG + ++ + ++E + NVA+ Sbjct: 174 VRTKPYVVARVQPLADAPPSQERGGDGGGDMVRHLVERVEEQLKNVAA 221 >01_05_0048 - 17561963-17563585 Length = 540 Score = 30.7 bits (66), Expect = 1.1 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 237 LQSRKYPGGYNALQRMYRDIQEPMLNVASSMAG 335 ++S K YN QRM RD EP LN + M G Sbjct: 410 IKSEKIEEAYNLFQRMERDGCEPELNTYTMMVG 442 >12_01_0924 + 9161155-9161646,9161748-9162164,9162250-9162313, 9162621-9163030 Length = 460 Score = 29.1 bits (62), Expect = 3.3 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +3 Query: 228 PRPLQSRKYPGGYNALQRMYRDIQEPMLNVASSMAGNPFSGLVDNSD 368 P PL S ++ LQ M RD+++P N SM F LV +S+ Sbjct: 37 PSPLGSEMVDVDHDLLQDMLRDVEDPAYNKRDSM---KFRRLVSDSE 80 >09_02_0347 + 7604466-7604622,7604809-7605146 Length = 164 Score = 29.1 bits (62), Expect = 3.3 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = +3 Query: 228 PRPLQSRKYPGGYNALQRMYRDIQEPMLNVASSMAGNPFSGLVDNSD 368 P PL + LQ M RD+++P N SM FS LV +S+ Sbjct: 118 PSPLDGEMIDVDLDLLQDMLRDVEDPSYNEKDSM---KFSRLVSDSE 161 >06_03_0697 - 23621808-23622127,23622194-23622932,23623298-23623327, 23624183-23624200,23625176-23625268,23625665-23626123 Length = 552 Score = 29.1 bits (62), Expect = 3.3 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%) Frame = -1 Query: 108 LHLWVGGDEVRIFSGSFIICCT--NGLSK 28 LHLW+G ++ + + + CCT NGL K Sbjct: 139 LHLWLGNKWAKMANSTHLTCCTLVNGLVK 167 >07_01_0510 - 3794793-3795047,3796005-3796295,3796850-3796906, 3797021-3797055,3797132-3797172,3798020-3798519 Length = 392 Score = 27.9 bits (59), Expect = 7.5 Identities = 11/42 (26%), Positives = 25/42 (59%) Frame = +2 Query: 17 LRQVLDNPLVQQMMNDPENMRTSSPPTHKCKISCLEIQKSVI 142 +RQ++++P V+ + D ENM +H C + + ++S++ Sbjct: 157 VRQLMEHPAVKSPLPDLENMVILETGSHACPVIEAKFEESLL 198 >02_04_0612 + 24370446-24373044,24373135-24373541 Length = 1001 Score = 27.9 bits (59), Expect = 7.5 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 8 PDMLRQVLDNPLVQQMMNDPENMRTSSPPTHKCKISCLEIQKS 136 P + QV+D L ++ M+ + T H+C IS L++ S Sbjct: 916 PHQIFQVIDARLAEKSMDSNQTNMTLENAVHQCLISLLQLALS 958 >11_01_0466 + 3607947-3610608,3610725-3611018,3611494-3611895, 3611984-3612217,3614113-3614138,3614446-3614633, 3615707-3617670,3617938-3618423,3618527-3618894 Length = 2207 Score = 27.5 bits (58), Expect = 9.9 Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 8 PDMLRQVLDNPLVQQM-MNDPENMRTSSPPTHKCKISCLEI 127 PD + Q++D LVQ++ ++ + +R TH C +S L I Sbjct: 937 PDKMLQIVDPQLVQELGLSQEDPVRVDETATH-CLLSVLNI 976 >10_08_0198 + 15688142-15690427,15690524-15690607,15691232-15691336, 15691420-15691528,15693037-15693188,15693278-15693583 Length = 1013 Score = 27.5 bits (58), Expect = 9.9 Identities = 15/62 (24%), Positives = 21/62 (33%) Frame = +3 Query: 228 PRPLQSRKYPGGYNALQRMYRDIQEPMLNVASSMAGNPFSGLVDNSDGTNPQQGSENRQP 407 P R Y G +A +R Y D+Q + S + N+ G P P Sbjct: 422 PSEENKRNYGNGEDAQERYYDDVQNMDGKIPSDSHTGRGGAIASNNSGAGPSGSGSIISP 481 Query: 408 LP 413 P Sbjct: 482 TP 483 >07_01_1004 + 8500584-8501881,8502194-8502402,8503024-8503266, 8503381-8503697,8503891-8504250 Length = 808 Score = 27.5 bits (58), Expect = 9.9 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 8 PDMLRQVLDNPLVQQM-MNDPENMRTSSPPTHKCKISCLEI 127 PD L Q++D LVQ++ +N + + T H C +S L I Sbjct: 633 PDRLLQIVDPQLVQELSLNQEDPVATDENAAH-CLLSVLNI 672 >01_06_0481 - 29646245-29646371,29646474-29646556,29646672-29646752, 29646843-29646899,29647007-29647094,29647304-29647374, 29647457-29647585,29647662-29648051,29648332-29648517, 29648612-29648692,29648787-29648879,29648966-29649086, 29649200-29649409,29649560-29649727,29649898-29650065, 29650144-29650311,29650453-29650620,29650738-29650905, 29651023-29651190,29651567-29651734,29652391-29652558, 29652645-29652812,29655720-29655887,29656069-29656236, 29656391-29656558,29656670-29656837,29657525-29657664, 29658033-29658221,29658243-29658315,29658379-29658452, 29658535-29658654,29658718-29658738,29658794-29658999, 29659094-29659271,29660066-29660126,29660232-29660341, 29660427-29660558,29661091-29661258,29661339-29661465, 29661794-29661831,29663321-29663422,29663505-29663562, 29663659-29663760,29663844-29663990,29664098-29664234, 29664313-29664462,29664561-29664720,29665820-29665878, 29666025-29666181,29666288-29666433,29666523-29666666, 29667242-29667376 Length = 2344 Score = 27.5 bits (58), Expect = 9.9 Identities = 14/57 (24%), Positives = 32/57 (56%) Frame = +1 Query: 82 LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLES 252 L + + +DL+ RN ++ + N +L+++ E ++ LQE ++ + +NLE+ Sbjct: 1799 LTEARERNEDLLKRNEDL--LKRNDDLIKKIEESSKTITQLQETLQRLEGKSTNLEA 1853 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,683,534 Number of Sequences: 37544 Number of extensions: 398880 Number of successful extensions: 1206 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1203 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1644004708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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