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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30203
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.     83   1e-16
Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical pr...    83   1e-16
Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical pr...    83   1e-16
AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical ...    33   0.24 
L14324-3|AAA28185.1|  851|Caenorhabditis elegans Abnormal nucleo...    29   2.2  
AF047027-1|AAC14263.1|  851|Caenorhabditis elegans B box zinc fi...    29   2.2  
Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...    28   5.1  
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical ...    28   5.1  
Z77660-3|CAB01171.1|  471|Caenorhabditis elegans Hypothetical pr...    27   8.9  
U28412-4|AAC46593.1|  269|Caenorhabditis elegans Hypothetical pr...    27   8.9  
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    27   8.9  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    27   8.9  
AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical...    27   8.9  

>Z99266-1|CAB16464.1|  292|Caenorhabditis elegans F15C11.2 protein.
          Length = 292

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 34/58 (58%), Positives = 47/58 (81%)
 Frame = +1

Query: 82  LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESI 255
           +I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP M QE+MR+HD+A+ NL+ I
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGI 214



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 255 PGGYNALQRMYRDIQEPMLNVA-SSMAGNPFSGL--VDNSDGTNPQQGSENRQPLPNPW 422
           PGG  AL+R+Y D+QEP+LN A +S++GNPF+ L    +S+    + G EN + LPNPW
Sbjct: 215 PGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSSEPRVDRAGQENNEALPNPW 273



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +2

Query: 2   SNPDMLRQVLDNPLVQQMMNDPENMRT 82
           +NPD +R V+DNP+ QQ++ +PE MRT
Sbjct: 130 NNPDAMRSVMDNPITQQLLGNPEFMRT 156


>Z98262-3|CAD44156.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 34/58 (58%), Positives = 47/58 (81%)
 Frame = +1

Query: 82  LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESI 255
           +I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP M QE+MR+HD+A+ NL+ I
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGI 214



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 255 PGGYNALQRMYRDIQEPMLNVA-SSMAGNPFSGL--VDNSDGTNPQQGSENRQPLPNPW 422
           PGG  AL+R+Y D+QEP+LN A +S++GNPF+ L    +S+    + G EN + LPNPW
Sbjct: 215 PGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSSEPRVDRAGQENNEALPNPW 273



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +2

Query: 2   SNPDMLRQVLDNPLVQQMMNDPENMRT 82
           +NPD +R V+DNP+ QQ++ +PE MRT
Sbjct: 130 NNPDAMRSVMDNPITQQLLGNPEFMRT 156



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 509 TPGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA*PEMAS*LINQDP 655
           +PG+ SL++QM  NP +  SM S    NS+ Q ++  P +   ++ Q P
Sbjct: 298 SPGISSLMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIP 346


>Z98262-2|CAD44155.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 34/58 (58%), Positives = 47/58 (81%)
 Frame = +1

Query: 82  LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESI 255
           +I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP M QE+MR+HD+A+ NL+ I
Sbjct: 139 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGI 196



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 255 PGGYNALQRMYRDIQEPMLNVA-SSMAGNPFSGL--VDNSDGTNPQQGSENRQPLPNPW 422
           PGG  AL+R+Y D+QEP+LN A +S++GNPF+ L    +S+    + G EN + LPNPW
Sbjct: 197 PGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSSEPRVDRAGQENNEALPNPW 255



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +2

Query: 2   SNPDMLRQVLDNPLVQQMMNDPENMRT 82
           +NPD +R V+DNP+ QQ++ +PE MRT
Sbjct: 112 NNPDAMRSVMDNPITQQLLGNPEFMRT 138



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 509 TPGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA*PEMAS*LINQDP 655
           +PG+ SL++QM  NP +  SM S    NS+ Q ++  P +   ++ Q P
Sbjct: 280 SPGISSLMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIP 328


>Z98262-1|CAB10932.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 34/58 (58%), Positives = 47/58 (81%)
 Frame = +1

Query: 82  LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESI 255
           +I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP M QE+MR+HD+A+ NL+ I
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGI 214



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 255 PGGYNALQRMYRDIQEPMLNVA-SSMAGNPFSGL--VDNSDGTNPQQGSENRQPLPNPW 422
           PGG  AL+R+Y D+QEP+LN A +S++GNPF+ L    +S+    + G EN + LPNPW
Sbjct: 215 PGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSSEPRVDRAGQENNEALPNPW 273



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +2

Query: 2   SNPDMLRQVLDNPLVQQMMNDPENMRT 82
           +NPD +R V+DNP+ QQ++ +PE MRT
Sbjct: 130 NNPDAMRSVMDNPITQQLLGNPEFMRT 156



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 509 TPGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA*PEMAS*LINQDP 655
           +PG+ SL++QM  NP +  SM S    NS+ Q ++  P +   ++ Q P
Sbjct: 298 SPGISSLMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIP 346


>Z71260-4|CAD44116.1|  454|Caenorhabditis elegans Hypothetical
           protein F15C11.2c protein.
          Length = 454

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 34/58 (58%), Positives = 47/58 (81%)
 Frame = +1

Query: 82  LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESI 255
           +I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP M QE+MR+HD+A+ NL+ I
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGI 214



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 255 PGGYNALQRMYRDIQEPMLNVA-SSMAGNPFSGL--VDNSDGTNPQQGSENRQPLPNPW 422
           PGG  AL+R+Y D+QEP+LN A +S++GNPF+ L    +S+    + G EN + LPNPW
Sbjct: 215 PGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSSEPRVDRAGQENNEALPNPW 273



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +2

Query: 2   SNPDMLRQVLDNPLVQQMMNDPENMRT 82
           +NPD +R V+DNP+ QQ++ +PE MRT
Sbjct: 130 NNPDAMRSVMDNPITQQLLGNPEFMRT 156



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 509 TPGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA*PEMAS*LINQDP 655
           +PG+ SL++QM  NP +  SM S    NS+ Q ++  P +   ++ Q P
Sbjct: 298 SPGISSLMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIP 346


>Z71260-3|CAD44115.1|  484|Caenorhabditis elegans Hypothetical
           protein F15C11.2b protein.
          Length = 484

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 34/58 (58%), Positives = 47/58 (81%)
 Frame = +1

Query: 82  LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESI 255
           +I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP M QE+MR+HD+A+ NL+ I
Sbjct: 139 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGI 196



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 255 PGGYNALQRMYRDIQEPMLNVA-SSMAGNPFSGL--VDNSDGTNPQQGSENRQPLPNPW 422
           PGG  AL+R+Y D+QEP+LN A +S++GNPF+ L    +S+    + G EN + LPNPW
Sbjct: 197 PGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSSEPRVDRAGQENNEALPNPW 255



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +2

Query: 2   SNPDMLRQVLDNPLVQQMMNDPENMRT 82
           +NPD +R V+DNP+ QQ++ +PE MRT
Sbjct: 112 NNPDAMRSVMDNPITQQLLGNPEFMRT 138



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 509 TPGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA*PEMAS*LINQDP 655
           +PG+ SL++QM  NP +  SM S    NS+ Q ++  P +   ++ Q P
Sbjct: 280 SPGISSLMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIP 328


>Z71260-2|CAA95799.1|  502|Caenorhabditis elegans Hypothetical
           protein F15C11.2a protein.
          Length = 502

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 34/58 (58%), Positives = 47/58 (81%)
 Frame = +1

Query: 82  LITSNPQMQDLMSRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESI 255
           +I SNPQ Q L+ RNPE+ H+LN+P ++RQTME+ RNP M QE+MR+HD+A+ NL+ I
Sbjct: 157 IIQSNPQFQALIERNPEVGHILNDPNVMRQTMEMIRNPNMFQEMMRNHDQAIRNLQGI 214



 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = +3

Query: 255 PGGYNALQRMYRDIQEPMLNVA-SSMAGNPFSGL--VDNSDGTNPQQGSENRQPLPNPW 422
           PGG  AL+R+Y D+QEP+LN A +S++GNPF+ L    +S+    + G EN + LPNPW
Sbjct: 215 PGGEAALERLYNDVQEPLLNSATNSLSGNPFASLRGDQSSEPRVDRAGQENNEALPNPW 273



 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 15/27 (55%), Positives = 22/27 (81%)
 Frame = +2

Query: 2   SNPDMLRQVLDNPLVQQMMNDPENMRT 82
           +NPD +R V+DNP+ QQ++ +PE MRT
Sbjct: 130 NNPDAMRSVMDNPITQQLLGNPEFMRT 156



 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = +2

Query: 509 TPGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA*PEMAS*LINQDP 655
           +PG+ SL++QM  NP +  SM S    NS+ Q ++  P +   ++ Q P
Sbjct: 298 SPGISSLMEQMMSNPSMQASMFSPEVINSIRQNMSNNPGLIDSIVGQIP 346


>AC024853-4|AAK68586.1|  746|Caenorhabditis elegans Hypothetical
           protein Y71F9AR.3 protein.
          Length = 746

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 15/42 (35%), Positives = 27/42 (64%)
 Frame = +2

Query: 491 RSRPHQTPGMQSLLQQMSENPRLVQSMVSSPYTNSMLQGLNA 616
           +S+ +++P M+SL++ +  NPR + S   SP TN+   G +A
Sbjct: 332 KSQENRSPAMRSLIENLRNNPR-ISSRQGSPITNASGLGYSA 372


>L14324-3|AAA28185.1|  851|Caenorhabditis elegans Abnormal nucleoli
           protein 1 protein.
          Length = 851

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +1

Query: 118 SRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESIQVVTMRSKECIGTY 297
           S +P +S   N+P + +Q  + A+  AM+Q +M +++ A+SN   +QV ++ +  C G  
Sbjct: 82  SSSPPLS---NSPTIEQQ--QHAQLTAMMQGIMSNNNVAVSNGSGVQVASVPAVHCSGCK 136

Query: 298 RN 303
            N
Sbjct: 137 SN 138


>AF047027-1|AAC14263.1|  851|Caenorhabditis elegans B box zinc
           finger protein Ncl-1 protein.
          Length = 851

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 19/62 (30%), Positives = 36/62 (58%)
 Frame = +1

Query: 118 SRNPEISHMLNNPELLRQTMELARNPAMLQELMRSHDRALSNLESIQVVTMRSKECIGTY 297
           S +P +S   N+P + +Q  + A+  AM+Q +M +++ A+SN   +QV ++ +  C G  
Sbjct: 82  SSSPPLS---NSPTIEQQ--QHAQLTAMMQGIMSNNNVAVSNGSGVQVASVPAVHCSGCK 136

Query: 298 RN 303
            N
Sbjct: 137 SN 138


>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +1

Query: 124 NPEISHMLNNPELLRQTMELARNPAMLQELMRSHD--RALSNLES 252
           +PEI+  + +PE+L   M++ +NPA + + + +    + +S L+S
Sbjct: 326 DPEIAAAIQDPEVLPALMDIMQNPANMMKYINNPKVAKLISKLQS 370


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/45 (28%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +1

Query: 124 NPEISHMLNNPELLRQTMELARNPAMLQELMRSHD--RALSNLES 252
           +PEI+  + +PE+L   M++ +NPA + + + +    + +S L+S
Sbjct: 326 DPEIAAAIQDPEVLPALMDIMQNPANMMKYINNPKVAKLISKLQS 370


>AL031632-2|CAA21005.2|  789|Caenorhabditis elegans Hypothetical
           protein Y32B12B.2 protein.
          Length = 789

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 181 LARNPAMLQE-LMRSHDRALSNLESIQVVTMRSKECIGTYRNR 306
           L R P MLQ+ +M    R   N  SI  V MR    I T+RNR
Sbjct: 122 LPRAPFMLQKKMMHILSRFHGNSISISPVFMRPSRMIRTFRNR 164


>Z77660-3|CAB01171.1|  471|Caenorhabditis elegans Hypothetical
           protein F38H4.3 protein.
          Length = 471

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 467 CLCGRLRLRSRPHQTPGMQSLLQQMSENPRLVQSMVSSPYTNSML 601
           C C    L+  P Q     SL  Q  + P+      SSP TN+++
Sbjct: 63  CCCCNSDLKEPPVQLIRSGSLTYQQGDTPKPASDPTSSPPTNNVI 107


>U28412-4|AAC46593.1|  269|Caenorhabditis elegans Hypothetical
           protein T19C3.2 protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 271 RSKECIGTYRNRCSMWP 321
           +SK C+ T++  C +WP
Sbjct: 141 QSKACVSTFKQDCKLWP 157


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
 Frame = -1

Query: 420 TGWVAAACSQILAAGL----CRQNC---LRVQRKGSLPCYWPH*ASVPVCPYTFFGAHCN 262
           +G+    C QI   G     C   C   L     GS  C  P   S   CP  F+G+ CN
Sbjct: 615 SGYTGEKCEQICRNGYWGVDCAHKCSCKLCDPSTGSCRCEDPEKCSDGPCPDGFYGSQCN 674


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 7/60 (11%)
 Frame = -1

Query: 420 TGWVAAACSQILAAGL----CRQNC---LRVQRKGSLPCYWPH*ASVPVCPYTFFGAHCN 262
           +G+    C QI   G     C   C   L     GS  C  P   S   CP  F+G+ CN
Sbjct: 615 SGYTGEKCEQICRNGYWGVDCAHKCSCKLCDPSTGSCRCEDPEKCSDGPCPDGFYGSQCN 674


>AF000261-10|AAB52930.1|  639|Caenorhabditis elegans Hypothetical
           protein F19B10.10 protein.
          Length = 639

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 97  PQMQDLMSRNPEISHMLNNPELLRQTME 180
           P MQDL  R+PEI+ M  + E L + ++
Sbjct: 53  PVMQDLADRHPEINKMYGSAEELWENLK 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,111,915
Number of Sequences: 27780
Number of extensions: 315038
Number of successful extensions: 1004
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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