Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30201
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical pr...    31   0.94 
AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA...    31   0.94 
Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical pr...    28   6.7  
AY652946-1|AAT73713.1|  708|Caenorhabditis elegans guanylate cyc...    28   6.7  
AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA ...    28   6.7  
AF038609-4|AAU87824.1|  708|Caenorhabditis elegans Guanylyl cycl...    28   6.7  

>Z82073-6|CAB04924.1|  333|Caenorhabditis elegans Hypothetical
           protein W06D12.3 protein.
          Length = 333

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -1

Query: 570 GKGSENFYGTHQQ---TSTHPAPCKWSPVLINFSSAIGV 463
           G+G  N++ T  Q   TS H     W+ VLI+F ++IG+
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAEFLNWTRVLIDFGASIGM 300


>AF260242-1|AAF97548.1|  333|Caenorhabditis elegans palmitoyl-CoA
           fatty acid desaturaseFAT-5 protein.
          Length = 333

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -1

Query: 570 GKGSENFYGTHQQ---TSTHPAPCKWSPVLINFSSAIGV 463
           G+G  N++ T  Q   TS H     W+ VLI+F ++IG+
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAEFLNWTRVLIDFGASIGM 300


>Z95123-2|CAB08356.1|  339|Caenorhabditis elegans Hypothetical
           protein VZK822L.1 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -1

Query: 570 GKGSENFYGTHQQ---TSTHPAPCKWSPVLINFSSAIGV 463
           G+G  NF+ T  Q   TS +     W+ VLI+ ++A+G+
Sbjct: 271 GEGGHNFHHTFPQDYRTSEYSLKYNWTRVLIDTAAALGL 309


>AY652946-1|AAT73713.1|  708|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 708

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = -1

Query: 576 NNGKGSENFYGTHQQTSTHPAPCKW--SPVLINFSSAIGVAVYHLSFNKLLIYSVTSIWI 403
           N+ KG   F+      +T  AP     S +L+       +  YH+ FNK +I     I++
Sbjct: 192 NHRKGKRLFHKFRNTKTTENAPSFTLSSTILVGLRDFKNIFPYHVCFNKQMIIEHIGIYL 251

Query: 402 SHNENVRN 379
                + N
Sbjct: 252 LREYGLEN 259


>AF260244-1|AAF97550.1|  339|Caenorhabditis elegans stearoyl-CoA
           desaturase FAT-6 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = -1

Query: 570 GKGSENFYGTHQQ---TSTHPAPCKWSPVLINFSSAIGV 463
           G+G  NF+ T  Q   TS +     W+ VLI+ ++A+G+
Sbjct: 271 GEGGHNFHHTFPQDYRTSEYSLKYNWTRVLIDTAAALGL 309


>AF038609-4|AAU87824.1|  708|Caenorhabditis elegans Guanylyl cyclase
           protein 37 protein.
          Length = 708

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
 Frame = -1

Query: 576 NNGKGSENFYGTHQQTSTHPAPCKW--SPVLINFSSAIGVAVYHLSFNKLLIYSVTSIWI 403
           N+ KG   F+      +T  AP     S +L+       +  YH+ FNK +I     I++
Sbjct: 192 NHRKGKRLFHKFRNTKTTENAPSFTLSSTILVGLRDFKNIFPYHVCFNKQMIIEHIGIYL 251

Query: 402 SHNENVRN 379
                + N
Sbjct: 252 LREYGLEN 259


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,880,480
Number of Sequences: 27780
Number of extensions: 255684
Number of successful extensions: 553
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)