Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30200
         (788 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-P...    30   3.1  
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P...    30   3.1  
BT021392-1|AAX33540.1|  518|Drosophila melanogaster LD20874p pro...    29   7.2  
AY061247-1|AAL28795.1|  294|Drosophila melanogaster LD18613p pro...    29   7.2  
AE014134-3517|ABC65923.1|  415|Drosophila melanogaster CG2201-PD...    29   7.2  
AE014134-3516|AAN11129.1|  415|Drosophila melanogaster CG2201-PC...    29   7.2  
AE014134-3515|AAN11128.1|  554|Drosophila melanogaster CG2201-PB...    29   7.2  
AE014134-3514|AAF57221.2|  518|Drosophila melanogaster CG2201-PA...    29   7.2  
AE013599-606|AAM68853.1|  176|Drosophila melanogaster CG30374-PA...    29   9.6  

>AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-PB,
           isoform B protein.
          Length = 1387

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 649 NSNP*GESVIVLDCGINEHEYLCIL*VRESVTLLETRACL 530
           N N  G  + +LDCG+  ++  C+L    SVTLL   A L
Sbjct: 188 NPNGKGPRIAILDCGLKLNQLRCLLQRGASVTLLPWSARL 227


>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
           isoform A protein.
          Length = 2224

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 649 NSNP*GESVIVLDCGINEHEYLCIL*VRESVTLLETRACL 530
           N N  G  + +LDCG+  ++  C+L    SVTLL   A L
Sbjct: 188 NPNGKGPRIAILDCGLKLNQLRCLLQRGASVTLLPWSARL 227


>BT021392-1|AAX33540.1|  518|Drosophila melanogaster LD20874p
           protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 495 STLNK*FNATKYKHARVSSNVTDSRTHKIHKYSCSLMPQSSTITDS 632
           S+L   F+ T       +SN++D+ THK    S S  P+  T  DS
Sbjct: 331 SSLRSNFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDS 376


>AY061247-1|AAL28795.1|  294|Drosophila melanogaster LD18613p
           protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 495 STLNK*FNATKYKHARVSSNVTDSRTHKIHKYSCSLMPQSSTITDS 632
           S+L   F+ T       +SN++D+ THK    S S  P+  T  DS
Sbjct: 107 SSLRSNFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDS 152


>AE014134-3517|ABC65923.1|  415|Drosophila melanogaster CG2201-PD,
           isoform D protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 495 STLNK*FNATKYKHARVSSNVTDSRTHKIHKYSCSLMPQSSTITDS 632
           S+L   F+ T       +SN++D+ THK    S S  P+  T  DS
Sbjct: 228 SSLRSNFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDS 273


>AE014134-3516|AAN11129.1|  415|Drosophila melanogaster CG2201-PC,
           isoform C protein.
          Length = 415

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 495 STLNK*FNATKYKHARVSSNVTDSRTHKIHKYSCSLMPQSSTITDS 632
           S+L   F+ T       +SN++D+ THK    S S  P+  T  DS
Sbjct: 228 SSLRSNFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDS 273


>AE014134-3515|AAN11128.1|  554|Drosophila melanogaster CG2201-PB,
           isoform B protein.
          Length = 554

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 495 STLNK*FNATKYKHARVSSNVTDSRTHKIHKYSCSLMPQSSTITDS 632
           S+L   F+ T       +SN++D+ THK    S S  P+  T  DS
Sbjct: 367 SSLRSNFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDS 412


>AE014134-3514|AAF57221.2|  518|Drosophila melanogaster CG2201-PA,
           isoform A protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 495 STLNK*FNATKYKHARVSSNVTDSRTHKIHKYSCSLMPQSSTITDS 632
           S+L   F+ T       +SN++D+ THK    S S  P+  T  DS
Sbjct: 331 SSLRSNFDETLGDSLDGNSNISDTETHKSRSVSPSPCPELDTTNDS 376


>AE013599-606|AAM68853.1|  176|Drosophila melanogaster CG30374-PA
           protein.
          Length = 176

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 217 EGVC-NSSRKRRQRVLF*VIYAGEK*GAPSCVGDKLKVLTCNHQVVVRRFTDIALVL-EV 390
           +G C N  RK R ++   +I    +     CVGD   +L C+   +  R+  + +V   V
Sbjct: 64  KGDCQNMLRKTRFQLATSLICVSGQKDKDVCVGDGGSILVCSPDAIFARYHQVGIVAWGV 123

Query: 391 ECG 399
           +CG
Sbjct: 124 DCG 126


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,511,030
Number of Sequences: 53049
Number of extensions: 560395
Number of successful extensions: 1066
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)