Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30199X
         (400 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5VDZ5 Cluster: Major facilitator superfamily MFS_1; n=...    33   2.7  
UniRef50_Q9Y1I7 Cluster: Sperm lysin precusor precursor; n=1; Te...    31   6.3  
UniRef50_A0CTV8 Cluster: Chromosome undetermined scaffold_27, wh...    31   8.3  

>UniRef50_A5VDZ5 Cluster: Major facilitator superfamily MFS_1; n=1;
           Sphingomonas wittichii RW1|Rep: Major facilitator
           superfamily MFS_1 - Sphingomonas wittichii RW1
          Length = 426

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -2

Query: 375 NGLGFLLIPIFQYRAMVSD*GWNLFHAPVQCLFLKI 268
           NGLG++L PIF  R M+   GW   +  + CL L I
Sbjct: 157 NGLGYMLTPIFA-RVMIDGLGWRWAYVGLGCLALFI 191


>UniRef50_Q9Y1I7 Cluster: Sperm lysin precusor precursor; n=1;
           Tegula aureotincta|Rep: Sperm lysin precusor precursor -
           Tegula aureotincta
          Length = 153

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = -1

Query: 244 PVQKYYSRIKIYHLWKSYSTIC 179
           P+ KY+S++K+Y++W ++S  C
Sbjct: 64  PMFKYFSKMKVYNMWPNWSNWC 85


>UniRef50_A0CTV8 Cluster: Chromosome undetermined scaffold_27, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_27, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2989

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 227  IVFLHWTY*TYNSTIFRNRHCTGAWNKFQPQSDTIALYWK 346
            ++FL+  Y TY   +  NRH    W  F  + DT A YW+
Sbjct: 2437 LIFLYRVY-TYRFHL-NNRHIRSRWGFFYNEYDTSAYYWE 2474


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,815,709
Number of Sequences: 1657284
Number of extensions: 8952428
Number of successful extensions: 19510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19500
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)