Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30199X
         (400 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    24   2.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   4.1  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      22   7.2  

>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -1

Query: 157 HLSARGYTTSTCPTPRALLQRRLNARYHNMYG 62
           H+S  G      P  R L  R L  R  N YG
Sbjct: 89  HISPAGSIARNSPAARFLSDRGLTPRDFNSYG 120


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 200 EELLNDLYGSCPLRPP 153
           ++ L  ++G CP RPP
Sbjct: 245 QQRLTGVHGGCPWRPP 260


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 99  SDVLMLGIIICMVFTTFKKIPLKRVYLVPFPV 4
           SDV +L I  C++  T +KI    + L   PV
Sbjct: 224 SDVALLRIFECLLEVTLQKILQLTIVLSTGPV 255


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,256
Number of Sequences: 2352
Number of extensions: 9324
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)