Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30198
(520 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu... 156 2e-37
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar... 156 2e-37
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ... 155 6e-37
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R... 141 8e-33
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1... 130 2e-29
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi... 119 3e-26
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=... 118 6e-26
UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;... 117 2e-25
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=... 111 7e-24
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso... 109 4e-23
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve... 105 5e-22
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417... 100 2e-20
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w... 99 5e-20
UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal ... 94 1e-18
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo... 91 1e-17
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl... 85 7e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ... 85 9e-16
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;... 79 8e-14
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella... 78 1e-13
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 62 7e-09
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa... 56 6e-07
UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15; Archa... 55 1e-06
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi... 54 3e-06
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae... 48 1e-04
UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1; Nanoar... 46 5e-04
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar... 42 0.006
UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3; Bacteri... 35 1.3
UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellu... 34 1.7
UniRef50_Q65F07 Cluster: YcbU; n=1; Bacillus licheniformis ATCC ... 33 3.0
UniRef50_A4ECY6 Cluster: Putative uncharacterized protein; n=1; ... 33 3.0
UniRef50_Q23KL5 Cluster: Protein kinase domain containing protei... 33 5.2
UniRef50_UPI000050FCD5 Cluster: COG0714: MoxR-like ATPases; n=1;... 32 6.8
UniRef50_Q38EA0 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q4SV45 Cluster: Chromosome undetermined SCAF13803, whol... 32 9.0
UniRef50_A1SHX5 Cluster: Putative uncharacterized protein; n=33;... 32 9.0
>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
Homo sapiens (Human)
Length = 197
Score = 156 bits (379), Expect = 2e-37
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 37 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 96
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 97 QNRQAQIEVVPSASALIIKALKEP 120
Score = 115 bits (277), Expect = 6e-25
Identities = 50/71 (70%), Positives = 64/71 (90%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ I + MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 122 RDRKKQKNIKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 181
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 182 DIIDDINSGAV 192
>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
(Human)
Length = 165
Score = 156 bits (379), Expect = 2e-37
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 5 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 65 QNRQAQIEVVPSASALIIKALKEP 88
Score = 117 bits (281), Expect = 2e-25
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 90 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 149
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 150 DIIDDINSGAV 160
>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
Drosophila melanogaster (Fruit fly)
Length = 307
Score = 155 bits (376), Expect = 6e-37
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIAKATSDWKGLKITV LT+
Sbjct: 147 FDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITVCLTI 206
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQA I+VVPSAA+LII+ALKEP
Sbjct: 207 QNRQAAISVVPSAASLIIKALKEP 230
Score = 114 bits (274), Expect = 1e-24
Identities = 48/73 (65%), Positives = 63/73 (86%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI ED++ IA++MR RSMAR L G+ KE+LGTAQSVGCTV+G+ PH
Sbjct: 232 RDRKKQKNIKHSGNIGFEDILAIARVMRPRSMARELKGTCKEVLGTAQSVGCTVDGKHPH 291
Query: 437 DLIDDINSGALTI 475
D+ID++N G++ +
Sbjct: 292 DVIDELNEGSIEV 304
>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
Rpl12 protein - Mus musculus (Mouse)
Length = 218
Score = 141 bits (342), Expect = 8e-33
Identities = 70/94 (74%), Positives = 80/94 (85%)
Frame = +3
Query: 27 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 206
V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+QNRQAQI
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165
Query: 207 VVPSAAALIIRALKEPLVIVKSRKISNTTATSPL 308
VVPSA+ALII+ALKEP + RK + ++PL
Sbjct: 166 VVPSASALIIKALKEP---PRDRKKQKNSESAPL 196
>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
Ostreococcus tauri|Rep: Putative 60S ribosomal protein
L12 - Ostreococcus tauri
Length = 230
Score = 130 bits (314), Expect = 2e-29
Identities = 61/85 (71%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATS-DWKGLKITVQLT 179
FDPN + +R GGEVGA SSLAPKIGPLGLSPKKVG+DIAK T+ DWKGL++TV+LT
Sbjct: 67 FDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRVTVKLT 126
Query: 180 VQNRQAQIAVVPSAAALIIRALKEP 254
VQNRQA+++VVP+A+AL+I+ALKEP
Sbjct: 127 VQNRQAKVSVVPTASALVIKALKEP 151
Score = 74.5 bits (175), Expect = 1e-12
Identities = 33/53 (62%), Positives = 44/53 (83%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCT 415
+DRKK K I H GN SL+D+I +A++MR +S A+ L+G+VKEILGTA+SVGCT
Sbjct: 153 QDRKKVKGITHTGNCSLDDIIEVARVMRPKSCAKNLAGTVKEILGTAKSVGCT 205
>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
L12 - Aspergillus terreus (strain NIH 2624)
Length = 189
Score = 119 bits (287), Expect = 3e-26
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 24/135 (17%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDW----------- 149
FDPNE+K+++LR GGEVGA S+LAPKIGPLGLSPKK+G+DIAK T DW
Sbjct: 5 FDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGCCDAR 64
Query: 150 -------------KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPLVIVKSRKISNT 290
KGL++TV+LT+QNRQA ++VVPSA++L+I+ALKEP K K
Sbjct: 65 KEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVVPSASSLVIKALKEPPRDRKKEKNIKH 124
Query: 291 TATSPLRM*SELRRS 335
+ PL E+ R+
Sbjct: 125 NKSIPLDDIIEIART 139
Score = 96.3 bits (229), Expect = 4e-19
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKK+KNIKHN +I L+D+I IA+ MR+RS+A+ L G+V EILGTA SVGC V+GR P
Sbjct: 114 RDRKKEKNIKHNKSIPLDDIIEIARTMRSRSLAKELKGTVLEILGTAFSVGCQVDGRSPK 173
Query: 437 DLIDDINSGALTI 475
D+ DD+ +G + I
Sbjct: 174 DVSDDVKAGEIDI 186
>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
Trypanosoma|Rep: 60S ribosomal protein L12, putative -
Trypanosoma brucei
Length = 219
Score = 118 bits (285), Expect = 6e-26
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPN+ V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIAK+T DWKGLK+T QL V
Sbjct: 60 FDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVTCQLRV 119
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
+NR A + V PS A+ +IRALKEP
Sbjct: 120 KNRVATVIVTPSVASRLIRALKEP 143
Score = 72.5 bits (170), Expect = 5e-12
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKK KNIKH+GNI+ +++ IAK SM + V E+LGTA S+GCT++G P
Sbjct: 145 RDRKKVKNIKHDGNIAFSEILKIAKESAPNSMGASMKSVVMEVLGTAVSIGCTIDGEHPR 204
Query: 437 DLIDDINSGALTI 475
+ + + G L +
Sbjct: 205 AIQEKVQEGKLKV 217
>UniRef50_UPI00005BFE3C Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 255
Score = 117 bits (281), Expect = 2e-25
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 180 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 239
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 240 DIIDDINSGAV 250
>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L12, putative -
Plasmodium chabaudi
Length = 177
Score = 111 bits (268), Expect = 7e-24
Identities = 50/75 (66%), Positives = 65/75 (86%)
Frame = +3
Query: 27 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQNRQAQIA 206
V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT+QNRQA+I
Sbjct: 25 VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84
Query: 207 VVPSAAALIIRALKE 251
VVP++A+++++ L E
Sbjct: 85 VVPTSASMVLKELNE 99
Score = 87.0 bits (206), Expect = 2e-16
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +2
Query: 251 ASRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRP 430
A RDRKK KNIKHNGN+ +E V IA+ M+ +S A+ G+VKEILGT S+GCTV+G+
Sbjct: 100 APRDRKKVKNIKHNGNLKIEQVYSIARAMKEKSRAKEFRGTVKEILGTCNSIGCTVDGKK 159
Query: 431 PHDLIDDINSGALTIDE 481
P + + I++G + + +
Sbjct: 160 PTTIQEMIDNGDIDVPD 176
>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L12 - Macaca mulatta
Length = 268
Score = 109 bits (262), Expect = 4e-23
Identities = 47/72 (65%), Positives = 64/72 (88%)
Frame = +2
Query: 254 SRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPP 433
+RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+ R LSG++KE+LGTAQS+GC V+GR P
Sbjct: 192 ARDRKKQKNIKHSGNITSDEIVNIARQMRHRSLDRELSGTIKELLGTAQSLGCNVDGRHP 251
Query: 434 HDLIDDINSGAL 469
H +IDDINSGA+
Sbjct: 252 HKIIDDINSGAV 263
Score = 67.3 bits (157), Expect = 2e-10
Identities = 46/92 (50%), Positives = 51/92 (55%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
F P EIK+ LRC G EV A S+LAPKI PLGLSPKK
Sbjct: 133 FGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPKK----------------------- 169
Query: 183 QNRQAQIAVVPSAAALIIRALKEPLVIVKSRK 278
QAQI VVPSA+ALII+ALKEP K +K
Sbjct: 170 --GQAQIEVVPSASALIIKALKEPARDRKKQK 199
>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 136
Score = 105 bits (253), Expect = 5e-22
Identities = 46/68 (67%), Positives = 59/68 (86%)
Frame = +2
Query: 278 NIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDIN 457
++KHNGNI+L+DV +AK+MR RSMAR+LSG+VKEILGT QSVGCTV+G PHD+ID IN
Sbjct: 67 SVKHNGNITLDDVTNVAKVMRPRSMARHLSGTVKEILGTCQSVGCTVDGMAPHDVIDKIN 126
Query: 458 SGALTIDE 481
SG + I++
Sbjct: 127 SGEIEIED 134
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/33 (78%), Positives = 29/33 (87%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 101
F+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 5 FELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37
>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YDR417C precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 123
Score = 100 bits (240), Expect = 2e-20
Identities = 53/93 (56%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Frame = -1
Query: 277 FLLFTITRG-SLRALMIRAAAEGTTAIWACLF*TVSCTVILRPFQSLVALAMSSPTFLGD 101
FL F ++ G S +A+M + A+GTT ACLF + TV L P SLVALA+SSPTF GD
Sbjct: 8 FLSFFLSLGGSFKAVMTKEEADGTTEAAACLFWIFNWTVTLIPLNSLVALAISSPTFFGD 67
Query: 100 RPRGPILGAKDDVAPTSPPTHRKFTILISFGSN 2
+P GPI GAK APTSPPT K+ L SFGSN
Sbjct: 68 KPNGPIFGAKAAEAPTSPPTALKYKYLTSFGSN 100
>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_101,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 164
Score = 99.1 bits (236), Expect = 5e-20
Identities = 39/80 (48%), Positives = 61/80 (76%)
Frame = +3
Query: 6 DPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQ 185
DPNE++++N++ GGE G S+LAPK+GPLGL+PK+VGD I + WKG+++ V L Q
Sbjct: 6 DPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMVNLRCQ 65
Query: 186 NRQAQIAVVPSAAALIIRAL 245
NR A + V+P+++AL+I+ +
Sbjct: 66 NRNADVTVIPTSSALLIKEI 85
Score = 93.5 bits (222), Expect = 3e-18
Identities = 40/78 (51%), Positives = 60/78 (76%)
Frame = +2
Query: 248 GASRDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGR 427
G RDRKK KN+KHNGN++LE VI +A+ + +S+A+ +G+VK++LGTAQS+G TV+G+
Sbjct: 87 GYERDRKKTKNVKHNGNLTLEQVIKVARAVEEKSLAKTFTGTVKQVLGTAQSLGATVDGQ 146
Query: 428 PPHDLIDDINSGALTIDE 481
P +I INSG L +++
Sbjct: 147 PVKAIIGKINSGELKVEK 164
>UniRef50_UPI00015533B4 Cluster: PREDICTED: similar to ribosomal
protein L12; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L12 - Mus musculus
Length = 142
Score = 94.3 bits (224), Expect = 1e-18
Identities = 42/68 (61%), Positives = 56/68 (82%)
Frame = +2
Query: 266 KKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 445
K QK+IKH+G+IS ++ + MR+RS+AR LSG++KEILGT+QSVGC V+G PHD+I
Sbjct: 70 KNQKSIKHSGSISFDEFVNTVWQMRHRSLARELSGTIKEILGTSQSVGCNVDGCHPHDII 129
Query: 446 DDINSGAL 469
DDINSGA+
Sbjct: 130 DDINSGAV 137
>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
Eukaryota|Rep: 60S ribosomal protein L12 -
Encephalitozoon cuniculi
Length = 166
Score = 91.1 bits (216), Expect = 1e-17
Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
DP + K + L+ VGGEV GAT LA ++GPLGLS K VG+DI KAT+D+K LK+ VQL +
Sbjct: 8 DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
++R+A + V PS A LII++LKEP
Sbjct: 65 KDRKATVEVQPSVATLIIKSLKEP 88
Score = 80.6 bits (190), Expect = 2e-14
Identities = 35/76 (46%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRN-RSMARYLSGSVKEILGTAQSVGCTVEGRPP 433
RDRKK+KNI HNG++ + +V+ IA+I R+ RS + LSG+VKE+LGT +S+GC V+G+ P
Sbjct: 90 RDRKKEKNILHNGSLRMTEVVDIARIARSSRSYSNSLSGTVKEVLGTCKSIGCKVDGKCP 149
Query: 434 HDLIDDINSGALTIDE 481
++ +I++G + + +
Sbjct: 150 KEVTREIDAGEIKLPD 165
>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
ATCC 50803
Length = 182
Score = 85.4 bits (202), Expect = 7e-16
Identities = 41/96 (42%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTVQ 185
DPN ++ LR GG + A ++L PKIGP GL PK VG+ I +AT +KG+++ V++ +
Sbjct: 6 DPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKVRIVSK 65
Query: 186 NRQAQIAVVPSAAALIIRALKE-PLVIVKSRKISNT 290
NRQ ++VVP+A++L+++AL E P I K + + +T
Sbjct: 66 NRQPTVSVVPTASSLLVKALGEGPRTIPKGQPLLHT 101
Score = 49.6 bits (113), Expect = 4e-05
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Frame = +2
Query: 269 KQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGR----PPH 436
K + + H G + + V+ IAK +R S A +G+V E+LG+A+SVGC VE + P
Sbjct: 94 KGQPLLHTGTVKFDTVLDIAKELRANSFALKYAGTVLEVLGSARSVGCKVEYKGTVYSPA 153
Query: 437 DLIDDINSGALTIDE 481
++ + + +G + I E
Sbjct: 154 EITEMVKAGDIEIPE 168
>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 84
Score = 85.0 bits (201), Expect = 9e-16
Identities = 39/52 (75%), Positives = 45/52 (86%)
Frame = +3
Query: 24 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLT 179
IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIAK T WKGLKI V+LT
Sbjct: 33 IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84
>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 169
Score = 78.6 bits (185), Expect = 8e-14
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = -3
Query: 248 LKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR 69
L+G DD+G R + L LSVL+ Q HSD +TLP+T LG+VI HLF RQT+ + GQ
Sbjct: 64 LEGFDDQGRGRRYHLNLSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQG 123
Query: 68 *CGTDFPADTSQIHDFNFIWVK 3
GTD P Q+HDF+ + V+
Sbjct: 124 RRGTDVPTGAPQVHDFDLVGVE 145
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = -1
Query: 388 KNLFY*ARKVPGH*SVSHDLRNSDYILKGDVAVVFDIFLLFTIT 257
++LF +R+ G V H N D ++KGDV+ V +FLL +++
Sbjct: 17 QDLFNGSREFSGQRLVLHLSSNVDNLIKGDVSTVLYVFLLLSVS 60
>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
natans|Rep: Ribosomal protein L2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 153
Score = 77.8 bits (183), Expect = 1e-13
Identities = 34/77 (44%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +3
Query: 21 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKAT-SDWKGLKITVQLTVQNRQA 197
K+V ++ GG+V + S LA KIGP GLSPKK+G+D AK T +W G+ +T++LT+ + A
Sbjct: 7 KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66
Query: 198 QIAVVPSAAALIIRALK 248
+ +VPS ++L+ R ++
Sbjct: 67 YLKIVPSVSSLLKREMQ 83
Score = 31.9 bits (69), Expect = 9.0
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 299 ISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVE 421
++ + +I I+K ++ +S ++ G VKE+LGT S+G ++
Sbjct: 91 LTFKQLIKISKKVQTKSYSKAFKGVVKEVLGTCCSMGILID 131
>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 202
Score = 62.1 bits (144), Expect = 7e-09
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = -3
Query: 248 LKGSDDKGCCRGNNSYLGLSVLNCQLHSDLETLPVTCGLGNVITHLFRRQTKRTDFRGQR 69
L+ D++ NN LSVL+ QL+S+L+TL + GLG++ T+L QT+ T+ Q
Sbjct: 95 LQSGDNQRGSGWNNRSSSLSVLDLQLNSNLDTLEILGGLGDIFTNLLWGQTQWTNLWSQS 154
Query: 68 *CGTDFPADTSQIHDFNFIWVK 3
T+F D+SQ+ +FIW+K
Sbjct: 155 SGSTNFTTDSSQVQVLDFIWIK 176
>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
jannaschii
Length = 161
Score = 55.6 bits (128), Expect = 6e-07
Identities = 25/57 (43%), Positives = 41/57 (71%)
Frame = +2
Query: 293 GNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 463
GN++LE VI IAK+ ++ ++ L +VKE+LGT S+G TVEG+ P ++ +I++G
Sbjct: 96 GNLTLEQVIKIAKMKKDAMLSYTLKNAVKEVLGTCGSMGVTVEGKDPKEVQKEIDAG 152
Score = 46.4 bits (105), Expect = 4e-04
Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +3
Query: 21 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 194
++V + GG A L P IGPLG++ +V +I + T D++G+++ V++ V + R+
Sbjct: 4 EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63
Query: 195 AQIAV-VPSAAALIIRAL 245
+I V +P ALI + L
Sbjct: 64 FEIEVGIPPTTALIKKEL 81
>UniRef50_P35025 Cluster: 50S ribosomal protein L11P; n=15;
Archaea|Rep: 50S ribosomal protein L11P - Sulfolobus
acidocaldarius
Length = 170
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +2
Query: 284 KHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 463
K GN+ LE + IA + + A+ L+ ++K +LGTA+S+G TVEG+ P D+I +I+ G
Sbjct: 93 KKIGNLDLEQIADIAIKKKPQLSAKTLTAAIKSLLGTARSIGITVEGKDPKDVIKEIDQG 152
Score = 38.7 bits (86), Expect = 0.079
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Frame = +3
Query: 21 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLK--ITVQLTVQNRQ 194
K + + GG L P + LGL+ ++V I T+ +KG+ +T+++ ++
Sbjct: 4 KTIKIMVEGGSAKPGPPLGPTLSQLGLNVQEVVKKINDVTAQFKGMSVPVTIEIDSSTKK 63
Query: 195 AQIAV-VPSAAALIIRAL--KEPLVIVKSRKISN 287
I V VP+ +L+++A+ +EP +KI N
Sbjct: 64 YDIKVGVPTTTSLLLKAINAQEPSGDPAHKKIGN 97
>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
(Human)
Length = 203
Score = 53.6 bits (123), Expect = 3e-06
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2
Query: 153 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 52
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
maripaludis
Length = 159
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +2
Query: 266 KKQKNIKHN--GNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHD 439
K + KH GNI++E ++ IAK+ ++ +A L + KE++GT SVG +VEG P +
Sbjct: 85 KGSQEPKHQVAGNITMEQIVKIAKMKQDAMLAYNLKNASKEVVGTCVSVGISVEGMTPSE 144
Query: 440 LIDDINSG 463
I++G
Sbjct: 145 AQKAIDAG 152
Score = 43.6 bits (98), Expect = 0.003
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 21 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV--QNRQ 194
++V + GG+ A L P IGPLG++ +V I T D++G+ + V++ V R
Sbjct: 4 QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIVDTDKRT 63
Query: 195 AQIAV-VPSAAALI 233
++ V +P A+ALI
Sbjct: 64 FEVEVGIPPASALI 77
>UniRef50_P62446 Cluster: 50S ribosomal protein L11P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L11P -
Nanoarchaeum equitans
Length = 160
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/57 (35%), Positives = 35/57 (61%)
Frame = +2
Query: 293 GNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSG 463
GN+S++DV+ IAK + L +VK +LGTA++ G VE + P ++ +++ G
Sbjct: 96 GNVSMKDVVEIAKKKIDSMPTSSLKAAVKSVLGTARATGIKVENKDPKEVTKEVDEG 152
>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L11P -
Thermoplasma volcanium
Length = 158
Score = 42.3 bits (95), Expect = 0.006
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2
Query: 293 GNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALT 472
GN +LE + +A +A+ L +V E+LGT ++G VEG+ P ++ I SG +
Sbjct: 96 GNATLEQIKNVAIKKMPSMLAKDLKSAVLEVLGTCVAMGINVEGKDPKEVQKLIKSGQIK 155
Query: 473 IDE 481
I++
Sbjct: 156 IEQ 158
Score = 40.3 bits (90), Expect = 0.026
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Frame = +3
Query: 45 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV---QNRQAQIAV-V 212
GG+ + P +GPLGL+ +V +I + T +++G+++ V +TV + ++ +I V V
Sbjct: 11 GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTVIDPETKKYEITVGV 70
Query: 213 PSAAALIIRAL 245
P +AL+ + L
Sbjct: 71 PPTSALLKKEL 81
>UniRef50_Q2S1Q1 Cluster: 50S ribosomal protein L11; n=3;
Bacteria|Rep: 50S ribosomal protein L11 - Salinibacter
ruber (strain DSM 13855)
Length = 146
Score = 34.7 bits (76), Expect = 1.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 293 GNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHD 439
G ++ +D + IA A + + GTA+S+G TVEG+P H+
Sbjct: 98 GTVTWDDCLDIADQKLQDLNAHTVEKGASMVAGTARSMGITVEGKPAHE 146
>UniRef50_Q8FSA7 Cluster: 50S ribosomal protein L11; n=616; cellular
organisms|Rep: 50S ribosomal protein L11 -
Corynebacterium efficiens
Length = 144
Score = 34.3 bits (75), Expect = 1.7
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 293 GNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEG 424
G ++++ + IA+ + AR + + K I GTA+S+G TVEG
Sbjct: 101 GKVTMDQIREIAETKKEDLNARDIDAAAKIIAGTARSMGITVEG 144
>UniRef50_Q65F07 Cluster: YcbU; n=1; Bacillus licheniformis ATCC
14580|Rep: YcbU - Bacillus licheniformis (strain DSM 13
/ ATCC 14580)
Length = 374
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 150 KGLKITVQLTVQNRQAQIAVVPSAAALIIRALKEPLVIVKSR 275
KGLKIT TV NR + I+V AA + L+E +IV R
Sbjct: 304 KGLKITGPNTVHNRTSLISVYAEEAARVESLLREKHIIVSKR 345
>UniRef50_A4ECY6 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 463
Score = 33.5 bits (73), Expect = 3.0
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 281 IKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEIL--GTAQSVGCTVEGRPPHDLIDDI 454
I + G + +G+A + N + R +S ++ I GT ++V C G+ P+DL
Sbjct: 355 ISYVGTLEAPSTLGVAGLSSNDELCRAVSDALDGITVDGTLEAVHCVWYGQMPYDLTAKT 414
Query: 455 NSGA 466
SGA
Sbjct: 415 VSGA 418
>UniRef50_Q23KL5 Cluster: Protein kinase domain containing protein;
n=3; Oligohymenophorea|Rep: Protein kinase domain
containing protein - Tetrahymena thermophila SB210
Length = 629
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGS 373
RD K +KHNGNI + D G AK++ N ++ + GS
Sbjct: 161 RDFKLANILKHNGNIKIAD-FGFAKLLGNDNLTSTMLGS 198
>UniRef50_UPI000050FCD5 Cluster: COG0714: MoxR-like ATPases; n=1;
Brevibacterium linens BL2|Rep: COG0714: MoxR-like
ATPases - Brevibacterium linens BL2
Length = 348
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 293 GNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEG 424
G++ LEDV G+ K + R+M + + GSV+ I T + V G
Sbjct: 74 GHVLLEDVPGVGKTLLARAMGKVVDGSVRRIQFTPDLLPTDVVG 117
>UniRef50_Q38EA0 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 2324
Score = 32.3 bits (70), Expect = 6.8
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = -2
Query: 480 SSMVKAPLLMSSIRSCGGLPSTVHPTDCAVPRISFTEPERYRAIDLFLMIFAIPI 316
S + L +S+ C P T CA ++ RY A+ F+ +FA+P+
Sbjct: 712 SELFDYTLALSADLLCVSAPDTQQTPPCAAALLAMLSARRYHAMFTFVQVFALPM 766
>UniRef50_Q4SV45 Cluster: Chromosome undetermined SCAF13803, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF13803,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 932
Score = 31.9 bits (69), Expect = 9.0
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = -3
Query: 422 PPQYIQLTVLCQESLLLSQKGTGPLICFS*SSQFRLHPQGR-CCRCV*YFSAFYDHERLL 246
PPQ + LT L+S+ G GP + S+ G C R Y + H L
Sbjct: 751 PPQRLGLTGCSPSERLISRVG-GPARSKTPSADVERSAYGADCSRSPAYLKVAHVHTLLT 809
Query: 245 KGSDDKGCCR 216
+ SD + CCR
Sbjct: 810 RSSDSRCCCR 819
>UniRef50_A1SHX5 Cluster: Putative uncharacterized protein; n=33;
Bacteria|Rep: Putative uncharacterized protein -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 287
Score = 31.9 bits (69), Expect = 9.0
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 45 GGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQ-----LTVQNRQAQIAV 209
G +V AT APK G +P ++G + + T+DW G + V LT+++R+ +
Sbjct: 10 GSDVLATDWRAPKRGRAVEAPAELGVVVEEVTTDWCGEIVAVDRDLDTLTLEDRRGKRRT 69
Query: 210 VPSAAALIIRALKEPLVIV 266
P ++ P+++V
Sbjct: 70 FPLGPGFLLEG--RPVILV 86
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,910,112
Number of Sequences: 1657284
Number of extensions: 11243191
Number of successful extensions: 31498
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 30571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31480
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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