Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30198
(520 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 156 4e-38
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 156 4e-38
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 156 4e-38
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 156 4e-38
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 156 4e-38
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 156 4e-38
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 147 2e-35
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 117 3e-26
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 54 4e-07
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 54 4e-07
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 51 3e-06
BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interactin... 31 1.8
AK022138-1|BAB13968.1| 258|Homo sapiens protein ( Homo sapiens ... 31 2.4
AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting prote... 31 2.4
AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75 pro... 31 2.4
AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein. 31 2.4
AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein. 31 2.4
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 5.6
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 5.6
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 5.6
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 156 bits (379), Expect = 4e-38
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 5 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 65 QNRQAQIEVVPSASALIIKALKEP 88
Score = 117 bits (281), Expect = 3e-26
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 90 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 149
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 150 DIIDDINSGAV 160
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 156 bits (379), Expect = 4e-38
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 5 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 65 QNRQAQIEVVPSASALIIKALKEP 88
Score = 117 bits (281), Expect = 3e-26
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 90 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 149
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 150 DIIDDINSGAV 160
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 156 bits (379), Expect = 4e-38
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 5 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 65 QNRQAQIEVVPSASALIIKALKEP 88
Score = 117 bits (281), Expect = 3e-26
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 90 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 149
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 150 DIIDDINSGAV 160
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 156 bits (379), Expect = 4e-38
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 5 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 65 QNRQAQIEVVPSASALIIKALKEP 88
Score = 117 bits (281), Expect = 3e-26
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 90 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 149
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 150 DIIDDINSGAV 160
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 156 bits (379), Expect = 4e-38
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 5 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 65 QNRQAQIEVVPSASALIIKALKEP 88
Score = 117 bits (281), Expect = 3e-26
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 90 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 149
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 150 DIIDDINSGAV 160
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 156 bits (379), Expect = 4e-38
Identities = 73/84 (86%), Positives = 80/84 (95%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 37 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 96
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNRQAQI VVPSA+ALII+ALKEP
Sbjct: 97 QNRQAQIEVVPSASALIIKALKEP 120
Score = 115 bits (277), Expect = 9e-26
Identities = 50/71 (70%), Positives = 64/71 (90%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ I + MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 122 RDRKKQKNIKHSGNITFDEIVNIVRQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 181
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 182 DIIDDINSGAV 192
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 147 bits (357), Expect = 2e-35
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DWKGL+ITV+LT+
Sbjct: 5 FDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
+NRQAQI VVPSA+A II+ALK+P
Sbjct: 65 ENRQAQIEVVPSASAPIIKALKKP 88
Score = 113 bits (271), Expect = 5e-25
Identities = 49/71 (69%), Positives = 63/71 (88%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKHNGNI+ ++++ IA+ MR+RS+AR LSG++KEI GTAQS+GC V+G PH
Sbjct: 90 RDRKKQKNIKHNGNITFDEIVNIARQMRHRSLARELSGTIKEIPGTAQSMGCNVDGHHPH 149
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 150 DIIDDINSGAV 160
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 117 bits (281), Expect = 3e-26
Identities = 51/71 (71%), Positives = 65/71 (91%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKKQKNIKH+GNI+ ++++ IA+ MR+RS+AR LSG++KEILGTAQSVGC V+GR PH
Sbjct: 57 RDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVDGRHPH 116
Query: 437 DLIDDINSGAL 469
D+IDDINSGA+
Sbjct: 117 DIIDDINSGAV 127
Score = 66.1 bits (154), Expect(2) = 2e-14
Identities = 29/33 (87%), Positives = 31/33 (93%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 101
FDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 5 FDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
Score = 32.3 bits (70), Expect(2) = 2e-14
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3
Query: 201 IAVVPSAAALIIRALKEP 254
I VVPSA+ALII+ALKEP
Sbjct: 38 IEVVPSASALIIKALKEP 55
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 53.6 bits (123), Expect = 4e-07
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2
Query: 153 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 52
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 53.6 bits (123), Expect = 4e-07
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = -2
Query: 153 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 52
PSSH PWQCHH PF ETD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 50.8 bits (116), Expect = 3e-06
Identities = 21/34 (61%), Positives = 21/34 (61%)
Frame = -2
Query: 153 PSSHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 52
PSSH PWQCHH PF TD R GP WHRL
Sbjct: 85 PSSHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>BC035013-1|AAH35013.1| 652|Homo sapiens RAB11 family interacting
protein 5 (class I) protein.
Length = 652
Score = 31.5 bits (68), Expect = 1.8
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 51 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 161
E+G SSL K GP LG SP KA S W GL+
Sbjct: 475 ELGRRSSLGEKGGPILGASPHHSSSGEGKAKSSWFGLR 512
>AK022138-1|BAB13968.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ12076 fis, clone HEMBB1002442, weakly similar to
LIN-10 PROTEIN. ).
Length = 258
Score = 31.1 bits (67), Expect = 2.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -3
Query: 431 AACPPQYIQLTVLCQESLLLSQKGTGPLICFS*SSQFRLHPQGRCCR 291
+A PP +++ L+L +G + F+ QFR PQGRCC+
Sbjct: 119 SAIPPHFLESGSHRIVGLVLGCEGNILPLVFNLVGQFRNKPQGRCCQ 165
>AF334812-1|AAK20892.1| 653|Homo sapiens Rab11 interacting protein
Rip11a protein.
Length = 653
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 51 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 161
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AF153085-1|AAF34356.1| 549|Homo sapiens phosphoprotein pp75
protein.
Length = 549
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 51 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 161
E+G SSL K GP LG SP KA S W GL+
Sbjct: 372 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 409
>AC010913-1|AAX88900.1| 522|Homo sapiens unknown protein.
Length = 522
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 51 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 161
E+G SSL K GP LG SP KA S W GL+
Sbjct: 476 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 513
>AB020664-1|BAA74880.1| 733|Homo sapiens KIAA0857 protein protein.
Length = 733
Score = 31.1 bits (67), Expect = 2.4
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 51 EVGATSSLAPKIGP-LGLSPKKVGDDIAKATSDWKGLK 161
E+G SSL K GP LG SP KA S W GL+
Sbjct: 556 ELGRRSSLGEKGGPILGASPHHSSSGEEKAKSSWFGLR 593
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 5.6
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 9 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 131
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 5.6
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 9 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 131
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 5.6
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 9 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 131
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,920,196
Number of Sequences: 237096
Number of extensions: 1754433
Number of successful extensions: 7812
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7809
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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