Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30198
(520 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical p... 68 4e-12
Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine re... 28 3.5
AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin... 28 4.6
AF106575-15|AAC78164.2| 350|Caenorhabditis elegans Serpentine r... 27 6.1
Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z82274-1|CAB05226.1| 165|Caenorhabditis elegans Hypothetical
protein JC8.3a protein.
Length = 165
Score = 145 bits (351), Expect = 2e-35
Identities = 66/84 (78%), Positives = 77/84 (91%)
Frame = +3
Query: 3 FDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITVQLTV 182
FDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T +LT+
Sbjct: 5 FDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTCKLTI 64
Query: 183 QNRQAQIAVVPSAAALIIRALKEP 254
QNR A+I VVPSAA+LI++ LKEP
Sbjct: 65 QNRVAKIDVVPSAASLIVKELKEP 88
Score = 103 bits (247), Expect = 8e-23
Identities = 45/73 (61%), Positives = 62/73 (84%)
Frame = +2
Query: 257 RDRKKQKNIKHNGNISLEDVIGIAKIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPH 436
RDRKK KN+KHNG+++++ +I IA+IMR RSMA+ L G+VKEILGTAQSVGCT++G+ PH
Sbjct: 90 RDRKKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPH 149
Query: 437 DLIDDINSGALTI 475
D+I+ I +G + I
Sbjct: 150 DIIESIANGEIEI 162
>Z82274-14|CAJ76933.1| 50|Caenorhabditis elegans Hypothetical
protein JC8.3c protein.
Length = 50
Score = 68.1 bits (159), Expect = 4e-12
Identities = 30/47 (63%), Positives = 39/47 (82%)
Frame = +2
Query: 335 MRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 475
MR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 1 MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47
>Z81042-5|CAD44090.1| 331|Caenorhabditis elegans Hypothetical
protein C27H6.4b protein.
Length = 331
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 270 SRKISNTTATSPLRM*SELRRS*ETDQWPGTFLAQ*KRFLAQHSQLDVLWRAGR 431
SR +S TTA S +L TD+ + A KR+ A +DVLWR +
Sbjct: 94 SRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAK 147
>Z81042-4|CAB02796.1| 272|Caenorhabditis elegans Hypothetical
protein C27H6.4a protein.
Length = 272
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +3
Query: 270 SRKISNTTATSPLRM*SELRRS*ETDQWPGTFLAQ*KRFLAQHSQLDVLWRAGR 431
SR +S TTA S +L TD+ + A KR+ A +DVLWR +
Sbjct: 35 SRSLSQTTAHSKTMSFEDLDALFGTDRVQEGYDALKKRYDAGEKSIDVLWRLAK 88
>Z83318-1|CAB05902.1| 1358|Caenorhabditis elegans Hypothetical
protein F55B11.1 protein.
Length = 1358
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Frame = -3
Query: 329 SQFRLHPQGRCCRCV*Y---FSAFY----DHERLLKGSDDKGCCRGNN 207
S L QG CRC Y AFY D LK +++ GC G N
Sbjct: 146 SDINLGLQGNLCRCTGYRPILEAFYSFAVDESGTLKVTEENGCGMGEN 193
>AF022976-4|AAC69083.2| 345|Caenorhabditis elegans Serpentine
receptor, class h protein37 protein.
Length = 345
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 411 HPTDCAVPRISFTEPERYRAIDL 343
HPT CAV F +P +Y IDL
Sbjct: 291 HPTACAVSLFLFYDPYQYYLIDL 313
>AC024785-5|AAF60596.1| 577|Caenorhabditis elegans C-type lectin
protein 73 protein.
Length = 577
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 164 DLETLPVTCGLGNVITHLFRRQTKRTDFR 78
D ++LP+ C LG V+ + ++ TDFR
Sbjct: 386 DSQSLPIWCKLGKVVKYKYKVTPGWTDFR 414
>AF106575-15|AAC78164.2| 350|Caenorhabditis elegans Serpentine
receptor, class w protein91 protein.
Length = 350
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 413 YIQLTVLCQESLLLSQKGTGPLICFS*SSQFR 318
YI + +C ++LLL T ICF SSQ+R
Sbjct: 309 YINVDAIC-DTLLLWNASTNCFICFLMSSQYR 339
>Z81571-5|CAB04615.1| 419|Caenorhabditis elegans Hypothetical
protein M01G12.6 protein.
Length = 419
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +1
Query: 88 VLLVCLLKRWVMTL 129
+L++CLLKRW M L
Sbjct: 180 ILMICLLKRWKMNL 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,702,542
Number of Sequences: 27780
Number of extensions: 267257
Number of successful extensions: 754
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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