Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30196X
(509 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces pomb... 29 0.53
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 1.6
SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces p... 27 2.2
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 2.9
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 26 3.8
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 25 5.0
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 25 5.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 5.0
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 25 6.6
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 6.6
SPAC631.01c |acp2||F-actin capping protein beta subunit |Schizos... 25 6.6
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 25 8.7
SPBC13G1.02 |||mannose-1-phosphate guanyltransferase |Schizosacc... 25 8.7
SPAC607.06c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 25 8.7
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 25 8.7
>SPAC29E6.09 ||SPAC30.13|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 339
Score = 28.7 bits (61), Expect = 0.53
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 143 PMYTYNF*LSGSSGNRSSVRKMTAIQGISPNLLKPSSL 30
P++TYNF +SG G+ S + K T + + +KPS +
Sbjct: 287 PLFTYNFNISGFDGD-SCIEKFTPLDALG---IKPSPI 320
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 250 EECSPTRTETSRASSYTNSLTEGNFYTTALYFSL 351
E SPTR+ SS++ S+ +G+F L F L
Sbjct: 472 ETKSPTRSSPRDLSSFSTSVNDGSFLFKNLMFGL 505
>SPBC19F5.01c |puc1|SPBP8B7.32c|cyclin Puc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 359
Score = 26.6 bits (56), Expect = 2.2
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = -1
Query: 323 KFPSVKLFVYDEALDVSVLVGEHSSMFLASQSPTLAVRDTDSFNMWPA-VSTTLGWMSDP 147
KFP+ K+ A V +V EH FL + + R D+F +WP + T +M +
Sbjct: 257 KFPASKI-----ACSVMNIVNEHVGSFLLTHPSMESYRKDDNF-LWPEDLDTVTSYMENM 310
Query: 146 PPMY 135
Y
Sbjct: 311 SKRY 314
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 2.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 70 MAVILRTELRFPDDPESQKLYVYIGGG 150
+A IL FP++ E+ +L ++GGG
Sbjct: 968 LATILDNASLFPENDETDQLNTFVGGG 994
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 3.8
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 88 TELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHMLNESVSLTARVGDWDARNIEECSPT 267
T L D QK+ + G +++ VL G L SVS + WD+R+ ++C T
Sbjct: 115 THLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRS-KDCIKT 173
Query: 268 RTE 276
E
Sbjct: 174 IEE 176
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 25.4 bits (53), Expect = 5.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 47 ASSVKYPGWLSFCELSSDSLTTPKVRSC 130
AS +YPG+ S S T VRSC
Sbjct: 198 ASHAEYPGFSGLTPFSIHSPTASSVRSC 225
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 25.4 bits (53), Expect = 5.0
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 8/53 (15%)
Frame = -1
Query: 239 ASQSPTLAVRDTDSFNMWPAVS--------TTLGWMSDPPPMYTYNF*LSGSS 105
A+Q + +R N WP V TTL W + P ++ L GSS
Sbjct: 178 AAQKDRVHLRSNTLINTWPNVGHLFAGKWKTTLPWRVESPELHAVQVHLGGSS 230
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 5.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 351 ESPVDLTPNVGVACLPPPMDSPAAKT 428
E+P P+VGV +PPP +P T
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAPPVPT 1221
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 25.0 bits (52), Expect = 6.6
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 185 PAVSTTLGWMSDPPPMYTYNF*LSGSSGN---RSSVRKMTAIQGISPNLLKPSS 33
P+VS+T + P + TY+ SS N RSS+ K+ + ++ L SS
Sbjct: 286 PSVSSTFVSATSEPEVETYSVSTKNSSSNKNLRSSLSKLLSTSNLNNKPLSLSS 339
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 25.0 bits (52), Expect = 6.6
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Frame = +3
Query: 126 VVRIHRRGIAHPPERGADRGP-----HVERVRVPHR--QGRGLGREEHRG 254
V+R HR A PP RG GP H + PH GRG GR RG
Sbjct: 89 VLRGHRAYYAPPPPRGPLFGPRIGGGHHGPLHGPHGGFGGRGGGRMGGRG 138
>SPAC631.01c |acp2||F-actin capping protein beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 268
Score = 25.0 bits (52), Expect = 6.6
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 181 AGHMLNESVSLTARVGDWDARNIEECSPTRTETS 282
AG +L + S T+ WD+ ++ EC PT TET+
Sbjct: 127 AGAVLIKKAS-TSNSSGWDSIHVFECLPT-TETN 158
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -1
Query: 101 NRSSVRKMTAIQGISPNLLKPSSLWYAVSRAIP 3
N ++ + GISP ++ PS +A +AIP
Sbjct: 423 NSNASHSAFSFSGISPAIISPSCSSHAFVKAIP 455
>SPBC13G1.02 |||mannose-1-phosphate guanyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 414
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 157 IHPSVVLTAGHMLNESVSLTARVGDWDARNI 249
IHP+ +++ G + +VS+ ARV D I
Sbjct: 290 IHPNAIVSKGAKIGPNVSIGARVRIEDGARI 320
>SPAC607.06c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 612
Score = 24.6 bits (51), Expect = 8.7
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 64 PWMAVILRTELRFPDDPESQKL--YVYIGGGSLIH 162
PW + + + R+ DP +QK+ +V +GGG+ +H
Sbjct: 214 PWHYMCMFLDTRY--DPSTQKIRGHVALGGGTDMH 246
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 24.6 bits (51), Expect = 8.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 345 FLESPVDLTPNVGVACLPPPMDSPAA 422
FLE+P+ + PNV + P + S A+
Sbjct: 387 FLEAPLPVQPNVQAETVTPKISSKAS 412
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,099,306
Number of Sequences: 5004
Number of extensions: 42430
Number of successful extensions: 130
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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