BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30196X (509 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0444 + 3212646-3212686,3213093-3213225,3213467-3213570,321... 32 0.31 02_05_0220 - 26885502-26885561,26885940-26886739,26887055-268874... 30 0.94 11_06_0280 + 21875166-21875470,21876450-21876645,21878270-21878887 30 1.2 03_05_0286 + 22750132-22750630,22750892-22750923,22751121-227512... 30 1.2 05_03_0665 - 16774043-16774522 29 2.2 03_05_0298 - 22873933-22874040,22874807-22875407,22875517-228755... 29 2.2 03_05_0060 + 20363857-20365359 29 2.9 03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606,193... 29 2.9 06_03_0729 + 23927656-23927661,23927774-23927923,23928316-239285... 28 3.8 04_04_1343 - 32781101-32781364,32782470-32782791,32784346-32784740 28 3.8 02_05_0240 - 27110752-27111180 28 5.0 11_01_0353 - 2648496-2649224 27 6.6 04_04_1322 + 32640414-32642327 27 6.6 01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028 27 6.6 12_02_0928 + 24488891-24489675,24490369-24490421,24490479-244912... 27 8.8 07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621,353... 27 8.8 04_04_0465 + 25427065-25427113,25428099-25428227,25428387-254284... 27 8.8 03_06_0246 + 32622793-32622804,32622883-32623057,32623395-326236... 27 8.8 01_01_0725 - 5668288-5669094,5669724-5669909,5670039-5670296 27 8.8 >02_01_0444 + 3212646-3212686,3213093-3213225,3213467-3213570, 3214360-3214504,3214592-3214732,3214835-3216298 Length = 675 Score = 31.9 bits (69), Expect = 0.31 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = +3 Query: 111 PRKSEVVRIHRRGIAHPPERGADRGPHVERVRVPHRQGRGLGREEHR 251 PR R HR AHP G D V + H +G+ REEH+ Sbjct: 541 PRAPSSHRKHRSRSAHPRSGGRDDEERVMDKLLMHYSKKGIDREEHK 587 >02_05_0220 - 26885502-26885561,26885940-26886739,26887055-26887421, 26887942-26888055,26888132-26888228,26889115-26889235, 26889306-26889390,26889494-26889643,26889871-26889987, 26890123-26890221,26890439-26890495,26890581-26890664, 26890759-26890828,26891015-26891169,26891557-26892095, 26892327-26892393,26892436-26892984,26893574-26893768, 26894485-26894569,26895822-26896441,26897154-26897486, 26897552-26897616,26897868-26897955,26898250-26898331, 26898720-26898796,26899152-26899256,26899496-26899630, 26900199-26900888,26901474-26902261,26902990-26904673 Length = 2825 Score = 30.3 bits (65), Expect = 0.94 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +3 Query: 351 ESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGKDNFGKEGRHRGI 491 + P+D TPN+ + P D AAK LA + K G RG+ Sbjct: 1714 QKPIDATPNLPTSA---PKDKAAAKAAALAAARDLERSAKIGSRRGL 1757 >11_06_0280 + 21875166-21875470,21876450-21876645,21878270-21878887 Length = 372 Score = 29.9 bits (64), Expect = 1.2 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = +1 Query: 88 TELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHMLNESVSLTARVGD 231 T R D YV+ G G +H VVL AG + + V+ R+GD Sbjct: 277 TRARPSDHHNPDNTYVFAGDGRELHEIVVLAAGELEHRFVA-AVRLGD 323 >03_05_0286 + 22750132-22750630,22750892-22750923,22751121-22751256, 22751909-22751913 Length = 223 Score = 29.9 bits (64), Expect = 1.2 Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 1/74 (1%) Frame = +1 Query: 22 AYQSEEGFSKFG-EIPWMAVILRTELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHMLN 198 AY ++E +F +I + ++R + +D + K Y Y+ G + +LT+ H++ Sbjct: 3 AYLNQEQRQQFSKQISSVVWMIRVDSAAKEDDLATKDYAYVAGVCMSPVGHILTSAHVVK 62 Query: 199 ESVSLTARVGDWDA 240 V W A Sbjct: 63 PGVKYVGACTSWKA 76 >05_03_0665 - 16774043-16774522 Length = 159 Score = 29.1 bits (62), Expect = 2.2 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Frame = -2 Query: 487 PRCLPSFPKLSLPQPVARHLVLAAGESMGGGKQATPTLGVRSTGD---SRKSRAPSYKNF 317 P LP P+L+LP P R G GGG + G+ D R+ R SYK + Sbjct: 72 PPPLPPPPRLALPPPPGRRDGYLGGGGAGGGGGGGGSGGMWCFSDPEMKRRRRVASYKAY 131 >03_05_0298 - 22873933-22874040,22874807-22875407,22875517-22875596, 22875685-22875816 Length = 306 Score = 29.1 bits (62), Expect = 2.2 Identities = 15/28 (53%), Positives = 15/28 (53%) Frame = +3 Query: 159 PPERGADRGPHVERVRVPHRQGRGLGRE 242 P ERG RG R R P R GRG G E Sbjct: 233 PEERGRHRGSRGRRPRRPCRAGRGGGGE 260 >03_05_0060 + 20363857-20365359 Length = 500 Score = 28.7 bits (61), Expect = 2.9 Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%) Frame = +1 Query: 199 ESVSLTARVG-DWDARNIEECSPTRTE 276 E+V A +G DW +N+++CS T TE Sbjct: 292 ENVGTVAAIGQDWTVKNMDKCSITYTE 318 >03_01_0248 - 1932992-1933423,1933440-1933489,1933558-1933606, 1933688-1933840 Length = 227 Score = 28.7 bits (61), Expect = 2.9 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = +2 Query: 371 SQRGRRLLAAAHGLSRCQDQVPRHRLGQGQLREGRETPGHHE 496 S+RGR+L ++R DQ+ + + ++ RE PG E Sbjct: 186 SERGRKLFTGRKNVARWYDQISKRETWKQVVKMQREHPGAFE 227 >06_03_0729 + 23927656-23927661,23927774-23927923,23928316-23928567, 23929072-23929209,23931213-23932730 Length = 687 Score = 28.3 bits (60), Expect = 3.8 Identities = 15/52 (28%), Positives = 24/52 (46%) Frame = +3 Query: 348 LESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGKDNFGKEGRHRGIMKKI 503 L P P+ PPP SPAA +C ++G G + G G+++ + Sbjct: 200 LNPPSSDAPSPPPPSPPPPPPSPAAHRRCSSSGGGGGDDDGYGGGDGMLRSL 251 >04_04_1343 - 32781101-32781364,32782470-32782791,32784346-32784740 Length = 326 Score = 28.3 bits (60), Expect = 3.8 Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Frame = +3 Query: 240 EEHRGVFTHQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVD--LTPNVG 383 EE+ GV H+D N +F++ + + L DGA + ++ PV+ + N+G Sbjct: 187 EENNGVSEHEDGNCITFVLQDGVGGLEVLKDGAWVPVD-PVEGSIIVNIG 235 >02_05_0240 - 27110752-27111180 Length = 142 Score = 27.9 bits (59), Expect = 5.0 Identities = 12/43 (27%), Positives = 20/43 (46%) Frame = -2 Query: 463 KLSLPQPVARHLVLAAGESMGGGKQATPTLGVRSTGDSRKSRA 335 K+ + + +H+V A G GGG V + G+ + RA Sbjct: 51 KIVVSKRELKHMVAALGSGTGGGGAVAAAAAVTAAGERHRQRA 93 >11_01_0353 - 2648496-2649224 Length = 242 Score = 27.5 bits (58), Expect = 6.6 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%) Frame = +1 Query: 151 SLIHPSVVLTA-GHMLNESVSLTARVGDWDARNIEECSPTRTETSRASSYTNSLTEGNFY 327 S I PS + +A +V++ ARVG +++ + SP +S +++ +S + Y Sbjct: 47 SFIWPSSMSSACKQAAAAAVAVPARVGGGGSKS--KSSPYYFRSSSSAASFSSSSAATTY 104 Query: 328 TTALYFSLSR 357 +TA Y+S SR Sbjct: 105 STASYYSSSR 114 >04_04_1322 + 32640414-32642327 Length = 637 Score = 27.5 bits (58), Expect = 6.6 Identities = 13/30 (43%), Positives = 15/30 (50%) Frame = +2 Query: 377 RGRRLLAAAHGLSRCQDQVPRHRLGQGQLR 466 RGR L AAHG QVP +G +R Sbjct: 500 RGRSGLCAAHGTLMASKQVPESEHSRGMIR 529 >01_06_0728 + 31544005-31544856,31545439-31545597,31545705-31546028 Length = 444 Score = 27.5 bits (58), Expect = 6.6 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = +2 Query: 323 FIRRRSTFP*VAR*SDSQRGRRLLAAA-HGLSRCQDQVPR 439 FIRR S P R S S GR L AAA GLS ++PR Sbjct: 81 FIRRLSFAPQTRRFSSSAFGRLLDAAADRGLSELAVRLPR 120 >12_02_0928 + 24488891-24489675,24490369-24490421,24490479-24491229, 24491322-24491533,24491780-24492570,24492686-24492784 Length = 896 Score = 27.1 bits (57), Expect = 8.8 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 Query: 70 MAVILRTELRFPDDPESQKLYVYIGGG 150 MAV + EL FPDD E + + +GGG Sbjct: 191 MAVGMEVELPFPDDEEDESM---VGGG 214 >07_01_0468 + 3537669-3537890,3539003-3539130,3539398-3539621, 3539660-3540062,3540398-3540473 Length = 350 Score = 27.1 bits (57), Expect = 8.8 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 466 PKLSLPQPVARHLVLAAGESMGGGKQAT 383 P L LP PVA +V+AA ++GG + T Sbjct: 299 PLLHLPAPVAVVVVVAAAANVGGERGCT 326 >04_04_0465 + 25427065-25427113,25428099-25428227,25428387-25428479, 25428681-25428953,25429037-25429288,25429735-25430118, 25430243-25430483,25431986-25432736 Length = 723 Score = 27.1 bits (57), Expect = 8.8 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +3 Query: 93 APIP*RPRKSEVVRIHRRGIAHPPERGADRGPHV 194 AP P P + HR GI HP R + PHV Sbjct: 45 APAP-APAPAPAPETHRPGIRHPVPRHHRKRPHV 77 >03_06_0246 + 32622793-32622804,32622883-32623057,32623395-32623659, 32624594-32624693,32625076-32625125,32625239-32625293, 32625742-32625774 Length = 229 Score = 27.1 bits (57), Expect = 8.8 Identities = 19/70 (27%), Positives = 31/70 (44%) Frame = +1 Query: 67 WMAVILRTELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHMLNESVSLTARVGDWDARN 246 W A+++ L P L+V + L P + GH L E S+ G D++ Sbjct: 152 WKAILVYENLSNPYGIAGTLLHVQVSQSYLPKPKFIFNGGHELWEWRSICG-CGHMDSQP 210 Query: 247 IEECSPTRTE 276 + + + TRTE Sbjct: 211 LND-TTTRTE 219 >01_01_0725 - 5668288-5669094,5669724-5669909,5670039-5670296 Length = 416 Score = 27.1 bits (57), Expect = 8.8 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = +3 Query: 387 ACLPPPMDSPAAKTKCLATGWGKDN 461 A + PP+ SP A+T + T W + N Sbjct: 243 APVTPPLSSPTARTPRMKTDWDESN 267 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,549,407 Number of Sequences: 37544 Number of extensions: 349600 Number of successful extensions: 1233 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1200 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1233 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 1095026320 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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