Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30196X
(509 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 7e-09
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 56 2e-08
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-06
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 48 3e-06
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 47 1e-05
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 46 2e-05
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 45 4e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 4e-05
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 41 7e-04
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.002
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.003
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 38 0.005
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.008
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 37 0.008
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.019
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 35 0.034
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.034
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.034
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 35 0.045
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 35 0.045
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.078
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.078
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 34 0.078
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.24
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 31 0.55
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 30 0.96
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 30 0.96
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 29 1.7
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_24662| Best HMM Match : DUF229 (HMM E-Value=1.2e-26) 29 2.2
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 28 3.9
SB_57561| Best HMM Match : fn3 (HMM E-Value=0) 28 5.1
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 28 5.1
SB_39745| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32) 27 6.8
SB_8164| Best HMM Match : rve (HMM E-Value=0.00069) 27 6.8
SB_45473| Best HMM Match : Swi3 (HMM E-Value=4.6) 27 6.8
SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_16935| Best HMM Match : Cadherin (HMM E-Value=0) 27 6.8
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 27 6.8
SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.8
SB_927| Best HMM Match : Swi3 (HMM E-Value=4.6) 27 6.8
SB_57324| Best HMM Match : ig (HMM E-Value=1e-26) 27 9.0
SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038) 27 9.0
SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_28711| Best HMM Match : Peptidase_A16_N (HMM E-Value=3.7e-05) 27 9.0
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 27 9.0
SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 57.2 bits (132), Expect = 7e-09
Identities = 43/142 (30%), Positives = 54/142 (38%)
Frame = +3
Query: 51 VR*NTLDGCHFAN*APIP*RPRKSEVVRIHRRGIAHPPERGADRGPHVERVRVPHRQGRG 230
+R N C +PIP PR R P GP R H RG
Sbjct: 1338 MRPNCRKSCGLCTTSPIPSTPRPRPPTP-PRPPTPRPRPPTPRPGPPTPRPSGEHNLRRG 1396
Query: 231 LGREEHRGVFTHQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMD 410
G T QD V+ I+H + R+ D ALL L P L V + CLP +
Sbjct: 1397 DG--------TEQDFTVRQVIVHPNYRRQTTDSDVALLRLSHPATLNKAVSLICLPKEGE 1448
Query: 411 SPAAKTKCLATGWGKDNFGKEG 476
S A C TGWG+ + + G
Sbjct: 1449 SEAVGKNCYITGWGRTGYNRPG 1470
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/59 (45%), Positives = 32/59 (54%)
Frame = +3
Query: 279 VKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGK 455
VK H F+ ++ D ALL LE P L V VACLP P D P +KC TGWG+
Sbjct: 17 VKRIFKHSGFSMWRYRDDIALLQLERPAQLNDRVNVACLPSPGDVPPVGSKCWLTGWGR 75
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 48.4 bits (110), Expect = 3e-06
Identities = 27/74 (36%), Positives = 35/74 (47%)
Frame = +3
Query: 279 VKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGKD 458
+K HEQF+ R D ALL L PV + V CLP A +C TGWG+
Sbjct: 104 LKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLPSSGSRAQAGARCYITGWGRT 163
Query: 459 NFGKEGRHRGIMKK 500
G G GI+++
Sbjct: 164 VGG--GSAAGILQQ 175
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 48.4 bits (110), Expect = 3e-06
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 264 HQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDS--PAAKTKCL 437
+Q VK + + FN R + D ALL LE PV P+V CLPP P K C
Sbjct: 12 YQSIKVKKLVYNPGFNERHYRNDIALLELERPVLTNPHVSPVCLPPVNAGKVPVGK-NCF 70
Query: 438 ATGWGK 455
TGWG+
Sbjct: 71 ITGWGR 76
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +3
Query: 201 VRVPHRQGRGLGREEHRG-VFTHQDRNVKSFIIHEQFNRRKFL-YDGALLFLESPVDLTP 374
V + +G LG + + T QD V I+H + + L +D ALL LE +
Sbjct: 160 VTIAGNKGNTLGAHKRTSNIGTEQDIKVSKVILHPSYGKPVTLAHDIALLKLEKSATVNN 219
Query: 375 NVGVACLPPPMDSPAAKTKCLATGWG 452
NV CLP +P+ T C TGWG
Sbjct: 220 NVHTVCLPFNGPAPSDCTHCWITGWG 245
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 240 EEHRGV--FTHQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDS 413
E +R V T + NVK I H Q+N + D AL+ L SP L+ V CLPP
Sbjct: 534 EHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALIELASPAKLSSRVNPVCLPPHGYK 593
Query: 414 PAAKTKCLATG 446
A ++C TG
Sbjct: 594 LPAGSRCFITG 604
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 45.6 bits (103), Expect = 2e-05
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRRK-FLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCL 437
T Q+ +V + +H++F K + YD ALL L P + V CLP T C
Sbjct: 114 TEQEFDVSTLHLHQRFLTDKGYGYDIALLKLSRPAVINEFVRTVCLPAQGSRALEGTMCF 173
Query: 438 ATGWGKDNFGKE 473
TGWGK N ++
Sbjct: 174 ITGWGKTNITED 185
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLA 440
T Q V+ I H ++ YD ALL L P++ T V CL P D PA T C
Sbjct: 365 TEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL-PDSDFPAG-TLCYV 422
Query: 441 TGWGKDNF 464
TGWG N+
Sbjct: 423 TGWGSTNY 430
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 44.8 bits (101), Expect = 4e-05
Identities = 27/68 (39%), Positives = 33/68 (48%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLA 440
T Q V+ I H ++ YD ALL L P++ T V CL P D PA T C
Sbjct: 614 TEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL-PDSDFPAG-TLCYV 671
Query: 441 TGWGKDNF 464
TGWG N+
Sbjct: 672 TGWGSTNY 679
Score = 30.7 bits (66), Expect = 0.73
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +1
Query: 136 YIGGGSLIHPSVVLTAGHMLNE--SVSLTARVGDWDARNIEECSPTRTETSRASSYTNSL 309
+I GG++I P VLTA H + + + ++ +G+W N++ R S+ N
Sbjct: 572 HICGGNVISPWWVLTAAHCVQDERASNIKLTMGEWRLFNVDGTEQV-IPVERIISHANYS 630
Query: 310 TEGNFYTTALYFSLSRPLI*LPTWASPAC 396
Y AL L+RPL + P C
Sbjct: 631 YNTVDYDYAL-LKLTRPLN-FTQYVQPVC 657
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 231 LGREEHRG-VFTHQDRNVKSFIIHEQFNRRKFLYDGALLFLESPV--DLTPNVGVACLPP 401
+G + RG Q + I H ++N R+ + D ALL L +PV D VG CL
Sbjct: 491 VGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTD 550
Query: 402 PMDSPAAKTKCLATGWGKDN 461
PA +C TGWG N
Sbjct: 551 --QRPAPGKRCYITGWGAIN 568
Score = 35.9 bits (79), Expect = 0.019
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +3
Query: 231 LGREEHRG-VFTHQDRNVKSFIIHEQFNRRKFLYDGALLFLESPV--DLTPNVGVACLPP 401
+G + RG Q + I H ++N R+ + D ALL L +PV D VG CL
Sbjct: 162 VGAHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALLELATPVQFDSAGKVGTVCLTD 221
Query: 402 PMDSPAAKTKCLATG 446
PA +C TG
Sbjct: 222 --QRPAPGKRCYITG 234
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 237 REEHRGVFTHQDRNVKSFIIHEQF-NRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDS 413
RE G T V + +H +F + YD A++ L +P + + ACLP D
Sbjct: 349 RESSEGALTIP---VTAIHMHTRFMTDGSYGYDIAIMKLANPAPIGHTISPACLPGLYDQ 405
Query: 414 PAAKTKCLATGWGKDNFGKEG 476
+ T C TGWG +G G
Sbjct: 406 VTSGTMCYVTGWGMTEYGNAG 426
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/59 (38%), Positives = 30/59 (50%)
Frame = +3
Query: 279 VKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGK 455
V I HE++ R + +D ALL L P+ + V ACLP D KC TGWG+
Sbjct: 14 VARVIRHEKYKRLR--HDIALLRLARPLAVDKKVSTACLPQQGDRANPGLKCYITGWGR 70
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 40.7 bits (91), Expect = 7e-04
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +3
Query: 237 REEHRGVFTHQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSP 416
R + R + R K F H+ F+ D ALL L++P+ + V CLP
Sbjct: 133 RIKERSAIQQEFRLTKLFK-HKDFSMSHLKNDVALLKLDNPIQPSDKVNTVCLPERNSRA 191
Query: 417 AAKTKCLATGWGK 455
+C TGWG+
Sbjct: 192 QVGAQCFITGWGR 204
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/81 (29%), Positives = 36/81 (44%)
Frame = +3
Query: 219 QGRGLGREEHRGVFTHQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLP 398
Q +G EH G ++ + H F+ +D A+L L +PV LT +V CLP
Sbjct: 18 QTKGAHYREHDG----KELTISKITYHPGFSFATADHDIAILRLSAPVLLTSSVNTICLP 73
Query: 399 PPMDSPAAKTKCLATGWGKDN 461
+ C +GWG+ N
Sbjct: 74 SQGARASLGGNCFISGWGRIN 94
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPPMDSPA-AKTKCLATGWGKDNFGKE 473
YD AL+ LE V TP CL P D+P K C GWG+ +FG E
Sbjct: 131 YDVALVKLEKSVATTPKTVPICLVP-RDTPRDLKRDCYVAGWGRRSFGGE 179
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQ-FNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCL 437
T Q +V I+H Q F D AL+ L P L V +ACLP + + C
Sbjct: 421 TEQRFSVARIIVHPQYFEPTAINNDIALIKLNKPARLNKYVNLACLPRQGEELSDGKICY 480
Query: 438 ATGWG 452
ATGWG
Sbjct: 481 ATGWG 485
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 246 HRGVFTHQDRNVKSFIIHEQF-NRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAA 422
H+ V + + +F HE++ + +D AL+ L P + V CLP D
Sbjct: 373 HKRVLDGTEHKLSAFYKHEKYVGGKDKKHDLALIRLAKPAAFSAKVSPVCLPKQGDLLGN 432
Query: 423 KTKCLATGWGK 455
+ C TGWG+
Sbjct: 433 EKNCYTTGWGR 443
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGKDNFGKEGRHRGIMKKIE 506
YD AL+ L+ P V CLP + TKC TGWGK G + ++ ++E
Sbjct: 83 YDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSP--YSPVLNELE 140
Query: 507 V 509
V
Sbjct: 141 V 141
Score = 34.3 bits (75), Expect = 0.059
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGK 455
YD AL+ L+ P V CLP SP C TGWG+
Sbjct: 347 YDIALVKLKRPAVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGR 389
Score = 30.3 bits (65), Expect = 0.96
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = +1
Query: 115 ESQKLYVYIGGGSLIHPSVVLTAGHML----NESVSLTARVGDWDARNIE 252
++ L + GGSLI P +LT+ H N S R+G+ D R IE
Sbjct: 6 KTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDERRIE 55
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRR-KFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCL 437
+ QD ++ +H ++ ++ D ALL L+ P L +ACL P T+C
Sbjct: 315 SEQDFRIQRIFMHPNYHSPVQYANDIALLLLDRPARLDRYTNLACLAPRSSPLPDGTRCW 374
Query: 438 ATGWGKDNFG 467
+GWG+ + G
Sbjct: 375 ISGWGRLSSG 384
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGKDNFGKEGRHRGIMKKIE 506
YD AL+ L+ P V CLP + TKC TGWGK G + ++ ++E
Sbjct: 460 YDVALIKLKRPAVFHKRVHSVCLPSVTANLTTGTKCFVTGWGKTAEGSP--YSPVLNELE 517
Query: 507 V 509
V
Sbjct: 518 V 518
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGKDNFGKEGRHRGIMKKIE 506
YD AL+ L+ P V CLP + TKC TGWGK G + ++ ++E
Sbjct: 343 YDVALIKLKRPAVFHKCVYSVCLPSVTANLTTGTKCYVTGWGKTAEGSP--YSLVLNEVE 400
Query: 507 V 509
V
Sbjct: 401 V 401
Score = 35.1 bits (77), Expect = 0.034
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPP-MDSPAAKTKCLATGWGK 455
YD ALL L P+ + + CLP + PA K C TGWG+
Sbjct: 79 YDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKM-CYLTGWGE 121
Score = 34.3 bits (75), Expect = 0.059
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGK 455
YD AL+ L+ P V CLP SP C TGWG+
Sbjct: 632 YDIALVKLKRPAVFYKRVHSVCLPEKSWSPPDGAGCYVTGWGR 674
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 115 ESQKLYVYIGGGSLIHPSVVLTAGHML----NESVSLTARVGDWDARNIE 252
++ L + GGSLI P +LT+ H N S R+G+ D R E
Sbjct: 266 KTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLGEHDVRKYE 315
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 37.9 bits (84), Expect = 0.005
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 228 GLGREEHRGVFTHQDRNVKSFIIHEQF-NRRKFLYDGALLFLESPVDLTPNVGVACLPPP 404
G R G T QD VK I HE++ N D A++ LE P L V +ACLP
Sbjct: 80 GAHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEPARLNRAVNLACLPTQ 139
Query: 405 MDSPAAKTKCLAT 443
+ +C T
Sbjct: 140 SNEIQEGKRCWVT 152
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 145 GGSLIHPSVVLTAGHMLNESVSLTARV 225
GG+L+HP V+TA H +++ + R+
Sbjct: 51 GGTLVHPRFVVTASHCIDKKTPSSLRI 77
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 267 QDRNVKSFIIHEQFN-RRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLAT 443
Q +V+ I+H ++ YD AL+ L SP+ V CLP + T+C +
Sbjct: 178 QRPDVERIILHPKYAPHNNHDYDVALIKLASPLQYNDRVRPVCLPSLKEDLEENTQCYIS 237
Query: 444 GWG 452
GWG
Sbjct: 238 GWG 240
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAK--TKC 434
+ Q+ + ++H N+ +D AL+ L+ V LT V CLP P D+ + +
Sbjct: 792 SEQNVRASNLVLHPLANKNGLDFDVALIQLKGGVKLTAYVRTVCLPQPTDAILVRPGSVG 851
Query: 435 LATGWGKDNFG 467
+ GWG G
Sbjct: 852 IVAGWGSTQKG 862
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLA 440
+ Q+ ++ ++H +N YD ALL L P+ V CL P + A T C
Sbjct: 1859 SEQNIPIEGIVVHPSYNDLD--YDIALLKLRQPITFNAYVSQVCL--PQAALLAGTPCYV 1914
Query: 441 TGWGK 455
+GWG+
Sbjct: 1915 SGWGR 1919
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 36.7 bits (81), Expect = 0.011
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 228 GLGREEHRGVFTHQDRNVKSFIIHEQFNRR-KFLYDGALLFLESPVDLTPNVGVACLP-P 401
G ++ V T +D V I H+ ++ + D ALL LE+P +L VG CL
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCLANN 144
Query: 402 PMDSPAAK-TKCLATGWGKDNFG 467
P + KC TGWG + G
Sbjct: 145 NTHLPVDEFGKCYITGWGSLSSG 167
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 36.3 bits (80), Expect = 0.015
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 231 LGREEHRGVF-THQDRNVKSFIIHEQFNR-RKFLYDGALLFLESPVDLTPNVGVACLPPP 404
+G +G + T QD ++ I H +++ ++ +D AL+ L P + VG+ACL P
Sbjct: 195 MGAHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALIELAKPAVINKAVGLACLADP 254
Query: 405 MDSPAAKTKCLATG 446
KC TG
Sbjct: 255 SFPIDDGKKCWVTG 268
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 35.9 bits (79), Expect = 0.019
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Frame = +3
Query: 267 QDRNVKSFIIHEQFNRRKF--------LYDGALLFLESPVDLTPNVGVACLPPPMDSPAA 422
Q R VKS +HE + F ++D AL+ L+ PV +V C+ P S
Sbjct: 99 QRRGVKSITVHEHYKSMWFEGITDTPPMFDIALIELDRPVVFNFHVQPICIMRPNISFKW 158
Query: 423 KTKCLATGWG 452
T C +GWG
Sbjct: 159 NTACFISGWG 168
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 35.5 bits (78), Expect = 0.026
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 240 EEHRGVFTHQDRNVKSFIIHEQF-NRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSP 416
+E RGV Q V + +H F + + D AL+ L+ V + V CLP
Sbjct: 179 KERRGV---QSIQVSAVRLHRGFLTKDGWGNDIALIQLKKRVRRSRLVRPICLPRVGQEV 235
Query: 417 AAKTKCLATGWGKDNFG 467
TKC TGWGK N G
Sbjct: 236 EIGTKCYMTGWGKRNHG 252
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 35.1 bits (77), Expect = 0.034
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Frame = +3
Query: 267 QDRNVKSFIIHEQFNRRKFL---------YDGALLFLESPVDLTPNVGVACLPPPMDS-P 416
Q R++ + +HE + + FL +D AL+ L P NV CL PP P
Sbjct: 20 QTRDISAIYLHEAY-KSMFLEGIKDTPPDFDIALVRLSEPAIFDENVSPICLLPPEHKLP 78
Query: 417 AAKTKCLATGWG 452
KT C+ TGWG
Sbjct: 79 WGKT-CIITGWG 89
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 35.1 bits (77), Expect = 0.034
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 267 QDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATG 446
Q+ V+ H F+ ++ D ALL LE + V ACL P P C G
Sbjct: 393 QNIKVRRVYRHRGFSMANYVDDIALLELERSAVINDKVSTACL--PSGEPKVGAICYIAG 450
Query: 447 WGK 455
WG+
Sbjct: 451 WGR 453
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 35.1 bits (77), Expect = 0.034
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRRKFLY-DGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKC- 434
T QD K I+H F + Y D AL+ L + V L P+V CLP ++ + K
Sbjct: 75 TQQDILAKDIILHPNFKSLQTFYNDIALVKLRTRVKLGPSVRTICLPHKGEALLSPGKYG 134
Query: 435 LATGWG 452
GWG
Sbjct: 135 FVAGWG 140
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 34.7 bits (76), Expect = 0.045
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +3
Query: 246 HRGVFTHQDRNVKSFIIHEQF-NRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAA 422
H+ V + + +F HE++ + +D AL+ L P + V CLP D
Sbjct: 89 HKRVLDGTEHKLSTFYKHEKYVGGKDKKHDLALIKLAKPATFSTKVSPVCLPKQGDLMKE 148
Query: 423 KTKCLATG 446
+ C ATG
Sbjct: 149 RENCFATG 156
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 34.7 bits (76), Expect = 0.045
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +3
Query: 279 VKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKC 434
V I H++F+ D LL L +PV L+ +G CLP D A C
Sbjct: 157 VSQVISHKEFSMGHLRNDVTLLRLSAPVQLSDKIGTICLPAHGDRAPAGGHC 208
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 33.9 bits (74), Expect = 0.078
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +3
Query: 261 THQDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLA 440
T Q +VK I H +N + D AL+ L SPV L+ + +KC
Sbjct: 134 TEQTHDVKRIITHPTYNSPQLSNDIALIELSSPVPLSDRG---------HQVSVGSKCFI 184
Query: 441 TGWGK 455
TGWGK
Sbjct: 185 TGWGK 189
Score = 32.7 bits (71), Expect = 0.18
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 375 NVGVACLPPPMDSPAAKTKCLATGWGK 455
+V + CLP + +P T+C TGWG+
Sbjct: 806 HVNLVCLPDAVPAPTDGTRCWITGWGR 832
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +1
Query: 46 SKFGEIPWMAVILRTELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHMLN--ESVSLTA 219
+K G+ PW A LR+ FP GGSLIHP VLTA H ++ L
Sbjct: 670 AKQGDWPWQAQ-LRSTSGFP-----------FCGGSLIHPQWVLTATHCVSSRRPTDLNI 717
Query: 220 RVGDWDAR 243
R+G + R
Sbjct: 718 RLGAHNRR 725
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 33.9 bits (74), Expect = 0.078
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +3
Query: 267 QDRNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKC---L 437
Q RN+ H QF+ F D AL+ L+ ++ V CLP D + + +
Sbjct: 181 QLRNISEIRTHPQFDHVLFDADLALIKLDGEAIISEYVRPICLPETDDQASLISPSKFGM 240
Query: 438 ATGWGKDNFGKEG 476
A GWGK G++G
Sbjct: 241 AVGWGK-TVGRQG 252
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 33.9 bits (74), Expect = 0.078
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +3
Query: 231 LGREEHRGVFTHQDR-NVKSFIIHEQFNRRKFLY--DGALLFLESPVDLTPNVGVACLPP 401
LG G+ + + R + +H +N Y D AL+ L P T V CL
Sbjct: 272 LGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVCLAD 331
Query: 402 PMDSPAAKTKCLATGWGKDNFG 467
S T+C TGWG+ + G
Sbjct: 332 GTVSFPPGTECWITGWGRLHSG 353
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 55 GEIPWMAVILRTELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHMLNE 201
GE PW A+++ P K + GG+L+H V+TA H +N+
Sbjct: 220 GEWPWQAMLMF------QTPLGYKQFC---GGALVHEDWVVTASHCIND 259
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +3
Query: 330 DGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWG 452
D ALL L P LT + +AC+P T C TGWG
Sbjct: 722 DIALLRLSRPTILTHRINLACMPNDTVHFPNGTMCYITGWG 762
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 32.3 bits (70), Expect = 0.24
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 330 DGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWGKDNF 464
D ALL L T V CLP MD C TGWG+ +
Sbjct: 122 DVALLKLRDYPTKTDFVNTVCLPQYMDHVEIGKDCFITGWGRSYY 166
Score = 31.5 bits (68), Expect = 0.42
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = +1
Query: 58 EIPWMAVILRTELRFPDDPESQKLYV----YIGGGSLIHPSVVLTAGHML--NESVSLTA 219
E+P VI +E + P L++ +I GGSL+ P VLTA H + +++
Sbjct: 26 EVPATRVISGSEALLGEWPWQAWLHLQHTGFICGGSLVAPGWVLTAAHCILSDDASKYKV 85
Query: 220 RVGDWDARNIE 252
+GD D + IE
Sbjct: 86 VLGDVDRKKIE 96
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 31.1 bits (67), Expect = 0.55
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 375 NVGVACLPPPMDSPAAKTKCLATGWGK 455
NV + CLP + + + T+C TGWG+
Sbjct: 109 NVNLVCLPDNVPALSDGTRCYITGWGR 135
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 145 GGSLIHPSVVLTAGHMLN 198
GGSLIHP +LTA H ++
Sbjct: 81 GGSLIHPQWILTATHCVS 98
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 145 GGSLIHPSVVLTAGHMLNES 204
GGSLIHP VLTA H L +
Sbjct: 287 GGSLIHPEWVLTAAHCLENT 306
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 30.3 bits (65), Expect = 0.96
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +1
Query: 145 GGSLIHPSVVLTAGHMLNES 204
GGSLIHP VLTA H L +
Sbjct: 247 GGSLIHPEWVLTAAHCLENT 266
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 327 YDGALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCLATGWG 452
YD ALL L +P T V CL P C TGWG
Sbjct: 78 YDVALLRLATPAKFTNYVYPICLLPQGARFRPGKYCYVTGWG 119
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 29.1 bits (62), Expect = 2.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 136 YIGGGSLIHPSVVLTAGH--MLNESVSLTARVGDWDARNIEECSPTRTETSRASSYTNSL 309
++ GGSLI P VLTAGH + + +GD D R+ E S R + +
Sbjct: 86 FVCGGSLIAPQWVLTAGHCILTEDPEKYRVVLGDVD-RDTTEGSEQIFHVRRIIKHPHYS 144
Query: 310 TEGNFYTTALYFSLSRP 360
+ + LSRP
Sbjct: 145 RDVPYDNDVALLQLSRP 161
>SB_24662| Best HMM Match : DUF229 (HMM E-Value=1.2e-26)
Length = 972
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -3
Query: 138 VYVQLLTFGVVRESELSSQNDSHPGYFTELAEAFLALVR 22
VY L FG+V SELSS N + GY E FLA ++
Sbjct: 477 VYKVLPKFGMVLFSELSSWNANGLGYLDEDFARFLAWMK 515
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 28.3 bits (60), Expect = 3.9
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 46 SKFGEIPWMAVILRTELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHML--NESVSLTA 219
+K G+ PW A LRT FP Y GG SLI P +LTA H + ++ S+
Sbjct: 17 AKHGDWPWQAQ-LRTTSGFP----------YCGG-SLIAPQWILTATHCVERKQASSIVI 64
Query: 220 RVG 228
R+G
Sbjct: 65 RLG 67
>SB_57561| Best HMM Match : fn3 (HMM E-Value=0)
Length = 1614
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 4 GIALETAYQSE-EGFSKFGEIPWMAVILRTELRFPDDP 114
G+A TA++ F++ G PW A ++ TE R P P
Sbjct: 932 GLAAWTAHRVRINAFTRIGPGPWSADVVITEDRIPPPP 969
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/48 (43%), Positives = 25/48 (52%)
Frame = +1
Query: 55 GEIPWMAVILRTELRFPDDPESQKLYVYIGGGSLIHPSVVLTAGHMLN 198
G+ PW A LRT FP Y GG SLIH + VLTA H ++
Sbjct: 400 GDWPWQAQ-LRTTTGFP----------YCGG-SLIHSNWVLTAAHCIS 435
>SB_39745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 8 SLWRQRTKARKASASSVKYPGWLSFCELSSDSLTTPKVRSCTYTS 142
+L R + ++R AS S ++YP W + T P R TY++
Sbjct: 669 ALSRTKRQSRSASTSRIRYPTWKR--RNRAKRKTLPATRGLTYST 711
>SB_19811| Best HMM Match : RVT_1 (HMM E-Value=3.5e-32)
Length = 670
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +3
Query: 114 RKSEVVRIHRRGIAHPPERGADRGPHVERVRVPHR---QGRGLGREEHRGVFTHQDRNV 281
R +E+ R HR+ I+ P H R P+R Q +G G H V D+ V
Sbjct: 168 RAAEISRTHRQVISGKPYSSQAETIHHTDKRQPNRRNNQRKGRGNNGHYAVVCRSDKQV 226
>SB_8164| Best HMM Match : rve (HMM E-Value=0.00069)
Length = 1117
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +3
Query: 96 PIP*RPRKSEVVRIHRRGIAHPPERG--ADRGPHVERVRVPH 215
P+P P + +HRR PP +G A GP V++ +P+
Sbjct: 1075 PLPRGPLRGRNGGVHRRKRGRPPGQGPTASDGPVVDKQGIPN 1116
>SB_45473| Best HMM Match : Swi3 (HMM E-Value=4.6)
Length = 195
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 199 ESVSLTARVGDWDARNIEECSPT-RTETSRASSYTNSLTEGNFYTTAL 339
+++ LT GD + R + T R +T + ++T+G YTT++
Sbjct: 86 QTLDLTDEAGDVNERIVNNYVKTCRGQTDSCGKFIKNMTQGKEYTTSI 133
>SB_39075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +3
Query: 108 RPRKSEVVRIHRRGIAHPPERGADRGPHVERVRVPHRQ 221
R K +R R +R A R H++R+R HRQ
Sbjct: 57 RDNKRHAIRDKHRNRIRDNKRHAIRDKHIQRIRDKHRQ 94
>SB_16935| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2204
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -1
Query: 236 SQSPTLAVRDTDSFNMWPAVSTTLGWMS--DPPPMYTYNF*LSGSSGNRSSV 87
++ PT+ +DSF+ V T +G +S DP + F L SS N S+
Sbjct: 484 NEPPTMISLSSDSFSENAPVGTLIGSLSTQDPDAQDRHRFSLETSSSNSVSI 535
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 27.5 bits (58), Expect = 6.8
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -1
Query: 245 FLASQSPTLAVRDTDSFNMWPAV--STTLGWMSDPPPMYTYNF*LSGSSGNRS 93
F SQS + VR TDS ++ +V + T+ ++DPP T + LSG+ S
Sbjct: 16 FEVSQSELIIVRATDSSGLFHSVAFNVTVIDVNDPPINVTLDGSLSGTVNENS 68
>SB_11518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1144
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 396 PPPMDSPAAKTKCLATGWGK--DNFGKEGRHRG 488
PPPMDSPA ++ +A + DN K G RG
Sbjct: 707 PPPMDSPAMASQGMAVAQKQPLDNTTKGGISRG 739
>SB_927| Best HMM Match : Swi3 (HMM E-Value=4.6)
Length = 253
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 199 ESVSLTARVGDWDARNIEECSPT-RTETSRASSYTNSLTEGNFYTTAL 339
+++ LT GD + R + T R +T + ++T+G YTT++
Sbjct: 86 QTLDLTDEAGDVNERIVNNYVKTCRGQTDSCGKFIKNMTQGKEYTTSI 133
>SB_57324| Best HMM Match : ig (HMM E-Value=1e-26)
Length = 947
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 293 DEALDVSVLVGEHSSMFLASQSPTLAVRDTDSFNMWPAVSTTLGWMSDPP 144
DE L++ +LVG S + RD A+ TTLGW+ P
Sbjct: 122 DEVLEIEILVGSDSLWQFQNGRTIRGARDEPV-----AIQTTLGWVLSGP 166
>SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038)
Length = 447
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 293 DEALDVSVLVGEHSSMFLASQSPTLAVRDTDSFNMWPAVSTTLGWMSDPP 144
DE L++ +LVG S + RD A+ TTLGW+ P
Sbjct: 261 DEVLEIEILVGSDSLWQFQNGRTIRGARDEPV-----AIQTTLGWVLSGP 305
>SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 293 DEALDVSVLVGEHSSMFLASQSPTLAVRDTDSFNMWPAVSTTLGWMSDPP 144
DE L++ +LVG S + RD A+ TTLGW+ P
Sbjct: 241 DEVLEIEILVGSDSLWQFQNGRTIRGARDEPV-----AIQTTLGWVLSGP 285
>SB_28711| Best HMM Match : Peptidase_A16_N (HMM E-Value=3.7e-05)
Length = 411
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 293 DEALDVSVLVGEHSSMFLASQSPTLAVRDTDSFNMWPAVSTTLGWMSDPP 144
DE L++ +LVG S + RD A+ TTLGW+ P
Sbjct: 290 DEVLEIEILVGSDSLWQFQNGRTIRGARDEPV-----AIQTTLGWVLSGP 334
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 293 DEALDVSVLVGEHSSMFLASQSPTLAVRDTDSFNMWPAVSTTLGWMSDPP 144
DE L++ +LVG S + RD A+ TTLGW+ P
Sbjct: 537 DEVLEIEILVGSDSLWQFQNGRTIRGARDEPV-----AIQTTLGWVLSGP 581
>SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 253 ECSPTRTETSRASSYTNSLTEGNFYTTALYFSLSRPLI*LPTWASPA 393
+CSP RT S S+ + T+ NF S+P++ + T P+
Sbjct: 141 QCSPARTGPSSPSAICSLETKQNFSPQRSTAEASQPMVSIGTHCPPS 187
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,545,233
Number of Sequences: 59808
Number of extensions: 339656
Number of successful extensions: 1321
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1123894172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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