Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30196X
(509 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03360.1 68418.m00289 DC1 domain-containing protein contains ... 32 0.26
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 31 0.60
At2g36290.1 68415.m04453 hydrolase, alpha/beta fold family prote... 31 0.60
At5g35570.1 68418.m04232 expressed protein similar to axi 1 [Nic... 29 1.4
At1g29180.1 68414.m03570 DC1 domain-containing protein contains ... 29 1.4
At4g26380.1 68417.m03795 DC1 domain-containing protein contains ... 29 1.8
At3g63100.1 68416.m07087 glycine-rich protein 29 2.4
At5g50380.1 68418.m06240 exocyst subunit EXO70 family protein co... 28 3.2
At5g25110.1 68418.m02975 CBL-interacting protein kinase 25 (CIPK... 28 3.2
At2g28460.1 68415.m03457 DC1 domain-containing protein contains ... 28 3.2
At2g26910.1 68415.m03228 ABC transporter family protein similar ... 28 4.2
At1g66450.1 68414.m07549 DC1 domain-containing protein contains ... 28 4.2
At2g32880.1 68415.m04031 meprin and TRAF homology domain-contain... 27 5.5
At5g51270.1 68418.m06356 protein kinase family protein contains ... 27 7.3
At4g00260.1 68417.m00033 transcriptional factor B3 family protei... 27 9.7
At2g15900.1 68415.m01822 phox (PX) domain-containing protein wea... 27 9.7
>At5g03360.1 68418.m00289 DC1 domain-containing protein contains Pfam
profile PF03107: DC1 domain
Length = 1610
Score = 31.9 bits (69), Expect = 0.26
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 207 HGLVQHVARGQHHARVDERSPAD 139
HG++QH + QHH ++DE + D
Sbjct: 1407 HGIIQHFSHPQHHLKLDENTSKD 1429
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -3
Query: 204 GLVQHVARGQHHARVDERSPAD 139
G++QH + HH R+DE + D
Sbjct: 408 GIIQHFSHKHHHLRLDENTDRD 429
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 30.7 bits (66), Expect = 0.60
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +3
Query: 306 FNRRKFLYD--GALLFLESPVDLTPNVGVACLPPPMDSPAAKTKCL--ATGWGKDNFGKE 473
F F+++ +LLF SP+ + P++ A L P + + T L AT FG
Sbjct: 232 FQGHHFMFNKSSSLLFTSSPLFIEPSLSTAALSTPPTAALSATALLQKATSLSSTTFGGG 291
Query: 474 GRHRGI 491
G+ R I
Sbjct: 292 GQTRSI 297
>At2g36290.1 68415.m04453 hydrolase, alpha/beta fold family protein
low similarity to
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
[Rhodococcus sp. RHA1] GI:8978311; contains Pfam profile
PF00561: hydrolase, alpha/beta fold family
Length = 364
Score = 30.7 bits (66), Expect = 0.60
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +3
Query: 144 RGIAHPPER--GADRGPHVERVRVPHRQGRGLGREEHRGVFTHQDRNVKSFIIHEQFNRR 317
+ I PP + G+ GP + R+ R GR L +EH GV + K ++H + R
Sbjct: 35 KAIQPPPSKLCGSPDGPSITGPRIKLRDGRQLAYKEH-GV-PRDEATHKIIVVHGSDSCR 92
Query: 318 KFLYDGALLFLESPVDLTPNVGV 386
+D A L SP D+ +GV
Sbjct: 93 ---HDNAFAALLSP-DIKEGLGV 111
>At5g35570.1 68418.m04232 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 652
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +1
Query: 130 YVYIGGGSLIHPSVVLTAGHMLNESVSLTARVGDW---DARNIEECSPTRTETSRASSYT 300
Y+Y GG+ + P++V+ A ++ + S+ G W ++ N C + + + T
Sbjct: 192 YIYKDGGNDVDPTLVMVASDVVGDQNSVVEFSGVWAKPESGNFSRCIDSSRSRKKLGANT 251
Query: 301 N 303
N
Sbjct: 252 N 252
>At1g29180.1 68414.m03570 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 444
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 204 GLVQHVARGQHHARVDERSPAD 139
G++QH + QHH R+DE D
Sbjct: 151 GIIQHFSHQQHHLRLDENKDRD 172
>At4g26380.1 68417.m03795 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 1016
Score = 29.1 bits (62), Expect = 1.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 204 GLVQHVARGQHHARVDERSPAD 139
G++QH QHH R+DE + D
Sbjct: 738 GVIQHFGHPQHHLRLDENTSRD 759
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +3
Query: 132 RIHRRGIAHPPERGADRGPHVERVRVPHRQGRGLGREEHRG 254
R H R H +RG RG H HR+GRG G RG
Sbjct: 107 RRHGRDHRHGRDRGHHRG-HGHHHHRGHRRGRGRGHGHGRG 146
>At5g50380.1 68418.m06240 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 683
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 439 ARHLVLAAGESMGGGKQATPTLGVRSTGDSRKSRAPSYKNF 317
+R L ESMGG +P+ G RS S+ + ++ F
Sbjct: 556 SRVLSALRDESMGGSSSGSPSYGQRSNNSSKMALKERFRGF 596
>At5g25110.1 68418.m02975 CBL-interacting protein kinase 25 (CIPK25)
identical to CBL-interacting protein kinase 25
[Arabidopsis thaliana] gi|17646697|gb|AAL41008
Length = 488
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 79 ILRTELRFPD--DPESQ----KLYVYIGGGSLIHPSVVLTAGHMLNESVSLTARVGDWDA 240
I ++E +P PES+ KL V + P+++ T N + + ++ + +
Sbjct: 255 IFKSEFEYPPWFSPESKRLISKLLVVDPNKRISIPAIMRTPWFRKNINSPIEFKIDELEI 314
Query: 241 RNIEECSPTRTETSRASSYT 300
+N+E+ +PT T T+ ++ T
Sbjct: 315 QNVEDETPTTTATTATTTTT 334
>At2g28460.1 68415.m03457 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 704
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 204 GLVQHVARGQHHARVDERSPAD 139
G++QH + QHH ++DE + D
Sbjct: 400 GIIQHFSHQQHHMKLDENTGRD 421
>At2g26910.1 68415.m03228 ABC transporter family protein similar to
PDR5-like ABC transporter GI:1514643 from [Spirodela
polyrhiza]
Length = 1420
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 265 TRTETSRASSYTNSLTEGNFYTTALYFSL 351
T T R + + N++ +GN Y +LYFS+
Sbjct: 520 TMTVFCRTTMHHNTIDDGNIYLGSLYFSM 548
>At1g66450.1 68414.m07549 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 700
Score = 27.9 bits (59), Expect = 4.2
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 213 EGHGLVQHVARGQHHARVDERSPAD 139
+G+G++QH + QH+ +DE + D
Sbjct: 395 KGNGIIQHFSHQQHYLSLDENTGRD 419
>At2g32880.1 68415.m04031 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein low similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 318
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 273 RNVKSFIIHEQFNRRKFLYDGALLFLESPVDLTPNVGVACLPPPM 407
+ V FI H Q R + D A+ + E ++ PN V +P M
Sbjct: 117 QGVVKFITHTQLKERFLVNDKAVFYAEISEEVIPNFLVTGIPRTM 161
>At5g51270.1 68418.m06356 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 819
Score = 27.1 bits (57), Expect = 7.3
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 5 ESLWRQRTKARKASASSVKYPGWLSFCELSSDSLTTPKVRSCTYTSAGDRSSTRAW 172
ESL + KAR + +++ P FC L D + P + + YT DR + W
Sbjct: 729 ESLKKVADKARNSLSAAPSQPPSHFFCPLLKDVMKEPCIAADGYTY--DRRAIEEW 782
>At4g00260.1 68417.m00033 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 528
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 14 WRQRTKARKASASSVKYPGWLSFCE---LSSDSLTTPKV 121
W K +K+S +S+ GW SFC L + S+ T K+
Sbjct: 323 WTLDLKVKKSSGTSLIKRGWRSFCSANGLRAGSIITLKL 361
>At2g15900.1 68415.m01822 phox (PX) domain-containing protein weak
similarity to SP|Q9Y5W8 Sorting nexin 13 {Homo sapiens};
contains Pfam profiles PF00787: PX domain, PF02194: PXA
domain
Length = 1009
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 229 DWDARNIEECSPTRTETSRASSYTNSLTEGNFYTTALY 342
DW AR++E + RTE R + N T+G Y Y
Sbjct: 360 DW-ARSLEVATQRRTEVLRPENLENMWTKGRNYQKKEY 396
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,597,346
Number of Sequences: 28952
Number of extensions: 243141
Number of successful extensions: 853
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 917929344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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