Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30194
(768 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 158 9e-40
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 155 5e-39
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 135 8e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 135 8e-33
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 129 5e-31
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 78 2e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 71 1e-13
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 55 1e-08
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 29 0.55
SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 29 0.97
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 28 1.3
SPBC16G5.08 |trp4||phosphoribosylanthranilate transferase Trp4|S... 27 3.0
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.9
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 27 3.9
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 26 5.2
SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po... 26 5.2
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 6.8
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 25 9.0
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 158 bits (383), Expect = 9e-40
Identities = 74/86 (86%), Positives = 80/86 (93%)
Frame = +2
Query: 251 ETTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQ 430
+ TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS Q
Sbjct: 218 KATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQ 277
Query: 431 ASIEIDSLFEGIDFYTSITRARFEEL 508
ASIEIDSLFEGIDFYTSITRARFEEL
Sbjct: 278 ASIEIDSLFEGIDFYTSITRARFEEL 303
Score = 147 bits (356), Expect = 2e-36
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIF
Sbjct: 137 VTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIF 196
Query: 189 DLGGGTFDVSILTIEDGIFEVK 254
DLGGGTFDVS+LTIE+GIFEVK
Sbjct: 197 DLGGGTFDVSLLTIEEGIFEVK 218
Score = 98.7 bits (235), Expect = 8e-22
Identities = 45/60 (75%), Positives = 54/60 (90%)
Frame = +1
Query: 511 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPE 690
ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINP+
Sbjct: 305 ADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPD 364
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 155 bits (377), Expect = 5e-39
Identities = 73/86 (84%), Positives = 79/86 (91%)
Frame = +2
Query: 251 ETTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQ 430
+ TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+ N RA+RRLRTACERAKRTLSSS Q
Sbjct: 218 KATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQ 277
Query: 431 ASIEIDSLFEGIDFYTSITRARFEEL 508
ASIEIDSL+EGIDFYTSITRARFEEL
Sbjct: 278 ASIEIDSLYEGIDFYTSITRARFEEL 303
Score = 144 bits (348), Expect = 2e-35
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
V +AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIF
Sbjct: 137 VTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIF 196
Query: 189 DLGGGTFDVSILTIEDGIFEVK 254
DLGGGTFDVS+LTIE+GIFEVK
Sbjct: 197 DLGGGTFDVSLLTIEEGIFEVK 218
Score = 98.7 bits (235), Expect = 8e-22
Identities = 44/60 (73%), Positives = 55/60 (91%)
Frame = +1
Query: 511 ADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPE 690
ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINP+
Sbjct: 305 ADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPD 364
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 135 bits (326), Expect = 8e-33
Identities = 61/83 (73%), Positives = 78/83 (93%)
Frame = +3
Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
K V +AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++
Sbjct: 168 KPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIV 226
Query: 183 IFDLGGGTFDVSILTIEDGIFEV 251
++DLGGGTFDVS+L+I++G+FEV
Sbjct: 227 VYDLGGGTFDVSLLSIDNGVFEV 249
Score = 94.3 bits (224), Expect = 2e-20
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +2
Query: 257 TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAS 436
T+GDTHLGGEDFDNR++N+ + + RK D+ + +A+ +L+ E+AKRTLSS
Sbjct: 252 TSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQKSVR 311
Query: 437 IEIDSLFEGIDFYTSITRARFEEL 508
IEI+S F G DF +++RA+FEE+
Sbjct: 312 IEIESFFNGQDFSETLSRAKFEEI 335
Score = 79.4 bits (187), Expect = 5e-16
Identities = 36/59 (61%), Positives = 50/59 (84%)
Frame = +1
Query: 514 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPE 690
DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INP+
Sbjct: 338 DLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPD 395
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 135 bits (326), Expect = 8e-33
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +3
Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVL
Sbjct: 139 KRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVL 198
Query: 183 IFDLGGGTFDVSILTIEDGIFEV 251
IFDLGGGTFDVS+L I+ G+FEV
Sbjct: 199 IFDLGGGTFDVSLLKIQGGVFEV 221
Score = 132 bits (318), Expect = 7e-32
Identities = 60/84 (71%), Positives = 72/84 (85%)
Frame = +2
Query: 257 TAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQAS 436
TAGDTHLGGEDFDN +V HF+QEFKRK K D++ + RALRRLR+ACERAKR LSS TQ +
Sbjct: 224 TAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTT 283
Query: 437 IEIDSLFEGIDFYTSITRARFEEL 508
+E+DSL GIDF +SITRARFE++
Sbjct: 284 VEVDSLSNGIDFSSSITRARFEDI 307
Score = 90.6 bits (215), Expect = 2e-19
Identities = 39/61 (63%), Positives = 53/61 (86%)
Frame = +1
Query: 508 DADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINP 687
+A F++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINP
Sbjct: 308 NATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINP 367
Query: 688 E 690
+
Sbjct: 368 D 368
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 129 bits (311), Expect = 5e-31
Identities = 60/84 (71%), Positives = 73/84 (86%)
Frame = +3
Query: 3 KTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 182
K V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V
Sbjct: 181 KDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVA 238
Query: 183 IFDLGGGTFDVSILTIEDGIFEVK 254
+FDLGGGTFD+SIL + +G+FEV+
Sbjct: 239 VFDLGGGTFDISILELNNGVFEVR 262
Score = 66.9 bits (156), Expect = 3e-12
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Frame = +2
Query: 254 TTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQA 433
+T GDTHLGGEDFD +V H V+ FK+ DL+ ++ A++R+R A E+AK LSS ++
Sbjct: 263 STNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLSKT 322
Query: 434 SIEIDSLFEGI----DFYTSITRARFEEL 508
I + + I+RA+FE+L
Sbjct: 323 DISLPFITADATGPKHINMEISRAQFEKL 351
Score = 56.0 bits (129), Expect = 6e-09
Identities = 24/73 (32%), Positives = 49/73 (67%)
Frame = +1
Query: 517 LFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPERG 696
L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NP+
Sbjct: 355 LVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEA 413
Query: 697 RSLWCSCPGCYLA 735
++ + G L+
Sbjct: 414 VAIGAAIQGGVLS 426
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 77.8 bits (183), Expect = 2e-15
Identities = 37/79 (46%), Positives = 52/79 (65%)
Frame = +2
Query: 266 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEI 445
D +LGGE + +VN F +EF++K D N R+L +LR CE KR LS+ T AS +
Sbjct: 249 DENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGTTASAAV 308
Query: 446 DSLFEGIDFYTSITRARFE 502
DSL +GIDF++SI R R++
Sbjct: 309 DSLADGIDFHSSINRLRYD 327
Score = 56.0 bits (129), Expect = 6e-09
Identities = 24/81 (29%), Positives = 50/81 (61%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIF 188
V V++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++
Sbjct: 163 VNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVA 222
Query: 189 DLGGGTFDVSILTIEDGIFEV 251
+ G +VS+++++ G+ +
Sbjct: 223 NFGATRSEVSVVSVKGGLMTI 243
Score = 31.5 bits (68), Expect = 0.14
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 541 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 678
V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 341 VTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 71.3 bits (167), Expect = 1e-13
Identities = 33/86 (38%), Positives = 53/86 (61%)
Frame = +2
Query: 251 ETTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQ 430
++T D +LG + D ++++F EFK KYK D+ +N +A RL TA ER K+ LS++
Sbjct: 226 KSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANAN 285
Query: 431 ASIEIDSLFEGIDFYTSITRARFEEL 508
A + ++ + ID + I R+ FEEL
Sbjct: 286 APLNVEMIMNDIDASSFIKRSDFEEL 311
Score = 69.7 bits (163), Expect = 4e-13
Identities = 36/87 (41%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = +3
Query: 6 TVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----R 173
+V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R
Sbjct: 140 SVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPR 199
Query: 174 NVLIFDLGGGTFDVSILTIEDGIFEVK 254
V I D G + VSI+ G F +K
Sbjct: 200 RVAIVDFGHSNYSVSIVEFSRGQFHIK 226
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/59 (33%), Positives = 39/59 (66%)
Frame = +1
Query: 538 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPERGRSLWCS 714
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N + + C+
Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDEAVARGCA 379
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 55.2 bits (127), Expect = 1e-08
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +2
Query: 275 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSL 454
L G + + +++ F +K+ DL+ N RAL RL R K LS++++A I+ L
Sbjct: 262 LSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEEL 321
Query: 455 FEGIDFYTSITRARFEEL 508
+GIDF ITR+ E L
Sbjct: 322 ADGIDFRLKITRSVLESL 339
Score = 50.8 bits (116), Expect = 2e-07
Identities = 19/59 (32%), Positives = 41/59 (69%)
Frame = +1
Query: 514 DLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPE 690
D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N +
Sbjct: 342 DMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNAD 400
Score = 46.8 bits (106), Expect = 3e-06
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +3
Query: 9 VQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGERNVLI 185
+ + V+TVP +FN+ QR +A I +VL +I++ A AI Y L + T +I
Sbjct: 160 ITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDPTYNII 219
Query: 186 FDLGGGTFDVSILTIE 233
+D G G+ ++++ +
Sbjct: 220 YDSGSGSTSATVISFD 235
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.55
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 336 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR*ILSLR 461
N K+ LP E + + + V G GP H+PH R LR + LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR 51
>SPAPB1A10.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 529
Score = 28.7 bits (61), Expect = 0.97
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 401 AKRTLSSSTQAS--IEIDSLFEGIDFYTSITRARFEELTPICSGLPWSQWRSLY 556
A T SST +S ++SLF G +TR F + +P CS ++W+ Y
Sbjct: 473 ASFTKESSTHSSPSFTLESLFSGAPRVVELTR--FSQPSPACSRALLARWKEEY 524
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|chr
3|||Manual
Length = 700
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 463 Y*LLHVNYSCSLRGADADLFRSTMEPVEKSL 555
Y +HVN+S S D D++R +P+E ++
Sbjct: 297 YERIHVNFSLSSYQQDYDIYRKPTDPIEVTI 327
>SPBC16G5.08 |trp4||phosphoribosylanthranilate transferase
Trp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 354
Score = 27.1 bits (57), Expect = 3.0
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 120 PTAAAIAYGLDKKGTGERNV-LIFDLGGGTFDVSILTIEDGIFEVKPPPATPTWEVRTLT 296
PT A I G+ K GE + LG G ++ E+G+ E+ P T TW VR T
Sbjct: 200 PTYARII-GVSKLSLGEVVAKTLLKLGAGRS--LVVCGEEGLDEISPAGPTHTWLVRDGT 256
Query: 297 I 299
I
Sbjct: 257 I 257
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 377 RLRTACERAKRTLSSSTQASIEIDSLFE-GIDFYTSITRARFEELTPICS 523
RLR +C RT+ S + + L + + F TS + L P C+
Sbjct: 391 RLRASCHSIARTMRSRHSDKVALSGLLDRAMQFLTSFISVCKKHLYPTCN 440
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 26.6 bits (56), Expect = 3.9
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +2
Query: 302 MVNHFVQEFKRKYKKDLATNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTS 481
+++ F EFK++ K D + L+ L + C R R SS SI ++ + +
Sbjct: 711 ILSSFSNEFKKRLKSDGTSIAHWLQGLASFCGRVFRRYSSLDCTSI-VEYVIKQFKVNQM 769
Query: 482 ITRARFEELTPICSGL-PWS 538
+EL +GL PW+
Sbjct: 770 FDLVILKELLSQMTGLQPWT 789
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/63 (23%), Positives = 26/63 (41%)
Frame = +2
Query: 482 ITRARFEELTPICSGLPWSQWRSLYVMPRWIRLKSTILYWWVAPLVSPRCRSSCKISLME 661
I AR E +TP + W+ R V+P+ + + + PL + I ++
Sbjct: 240 IANARGEGITPANIAISWAVKRGTSVLPKSVNESRIVSNFLYIPLTDKEMEAINNIGVVR 299
Query: 662 RSS 670
R S
Sbjct: 300 RFS 302
>SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 399
Score = 26.2 bits (55), Expect = 5.2
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 162 TGERNVLIFDLGGGTFDVSILTIEDGIFEVKPPPATPTWEVRTLTIAWSTTLSRSSRGN 338
TGE + I L F +SI ++E VKP WE R + W + + GN
Sbjct: 263 TGESKLTIPSLKSTIFFLSIPSLEATPITVKPESEMGDWESRNV---WKEVSAALASGN 318
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +3
Query: 147 LDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKPPPATPTWEVRT 290
LDK G+ I GG T SIL +GI VK + W T
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYET 95
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 162 TGERNVLIFDLGGGTFDVSILTIE-DGIFEVKPPPA 266
TG+ + ++ +GG T D+ ++ I G + K P A
Sbjct: 265 TGDGHKMVMSIGGSTVDLDLVQIHPTGFVDPKDPTA 300
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,306,576
Number of Sequences: 5004
Number of extensions: 68826
Number of successful extensions: 274
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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