Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30192
         (698 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RPE8 Cluster: Aspartyl-tRNA synthetase, putative; n=7...    34   3.9  
UniRef50_A4XKP9 Cluster: Peptidase S55, SpoIVB; n=1; Caldicellul...    33   5.1  
UniRef50_Q23GD9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.7  
UniRef50_A0DNP4 Cluster: Chromosome undetermined scaffold_58, wh...    33   6.7  
UniRef50_Q2B8M8 Cluster: Secreted protein containing cell-adhesi...    33   8.9  
UniRef50_A5K2C8 Cluster: SET domain containing protein; n=4; cel...    33   8.9  
UniRef50_A2DND1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.9  

>UniRef50_Q7RPE8 Cluster: Aspartyl-tRNA synthetase, putative; n=7;
           Plasmodium|Rep: Aspartyl-tRNA synthetase, putative -
           Plasmodium yoelii yoelii
          Length = 681

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -1

Query: 212 CINVFQYKNYSIFYYTK*ICVIFKTVILMN 123
           CI++  Y NYSIFY    IC IF+  ++ N
Sbjct: 357 CIDLRTYANYSIFYLQSEICKIFRNYLIDN 386


>UniRef50_A4XKP9 Cluster: Peptidase S55, SpoIVB; n=1;
           Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
           Peptidase S55, SpoIVB - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 412

 Score = 33.5 bits (73), Expect = 5.1
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = +3

Query: 162 FSV-IKYRVVFILEHVYATWINDY*VSLVDDKAVRAK-PIFFQIQFVKQNKKMNSRSEML 335
           FS+ + Y +   L  +Y     DY      DK V  K P+F  +  V  N     ++ +L
Sbjct: 6   FSIFLFYLIATTLFFIYLNITPDYLTCYKSDKCVSIKTPVFVDVNSVNNNVLKTIKNNLL 65

Query: 336 FGLSVISLNTRHLSLLLKV 392
           F  S   LN +  SL+ ++
Sbjct: 66  FKTSTFYLNNKSNSLICEL 84


>UniRef50_Q23GD9 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 223

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 25/93 (26%), Positives = 49/93 (52%)
 Frame = +3

Query: 129 KYNGFKYNTYSFSVIKYRVVFILEHVYATWINDY*VSLVDDKAVRAKPIFFQIQFVKQNK 308
           KY   KY  Y+F+    +++F+   + + +I DY  + ++D+ V    +  Q QF     
Sbjct: 40  KYLTIKY--YAFAFFWIQILFLSFILNSNYIGDY-NNFINDQQVVNDGLSNQSQF----D 92

Query: 309 KMNSRSEMLFGLSVISLNTRHLSLLLKVPFYLV 407
            + ++S  +  + ++SLN   +S +L + FYLV
Sbjct: 93  TLFAKSIAIIAVHILSLNIVKISSILTIFFYLV 125


>UniRef50_A0DNP4 Cluster: Chromosome undetermined scaffold_58, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_58, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1334

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 21/83 (25%), Positives = 39/83 (46%)
 Frame = +3

Query: 6    VKKKTYRHNVFNRFS*LK*NLVSCFIYLMNYDFSYIVRSIHKYNGFKYNTYSFSVIKYRV 185
            +  KT  H +  + S  +  L++  ++  +Y  S+ +  I      + N Y   +  Y+V
Sbjct: 1097 IDPKTQFHRIIIKNSKTQQQLLTVELFCQSYQHSHYILQIQFICSLQNNLYLCPINNYKV 1156

Query: 186  VFILEHVYATWINDY*VSLVDDK 254
            V IL+  Y TW   Y V + +D+
Sbjct: 1157 VQILQG-YGTWPTSY-VKMYNDQ 1177


>UniRef50_Q2B8M8 Cluster: Secreted protein containing cell-adhesion
           domains; n=1; Bacillus sp. NRRL B-14911|Rep: Secreted
           protein containing cell-adhesion domains - Bacillus sp.
           NRRL B-14911
          Length = 1707

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 147 YNTYSFSVIKYRVVFILEHVYATWINDY*VSLVDDKAVRAKPIFF 281
           +N++SF+   Y+  F ++H   TWIND     +  K ++   IFF
Sbjct: 854 FNSFSFNQATYKYYFRMDHQPWTWINDSSKKNLVTKKIQDDNIFF 898


>UniRef50_A5K2C8 Cluster: SET domain containing protein; n=4; cellular
            organisms|Rep: SET domain containing protein - Plasmodium
            vivax
          Length = 6587

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 2    VGQKKNVSPQRFQSIFVVKVEFSIMFYILNEL 97
            + QKKNV  + F  +FV  ++ ++M+ +LNE+
Sbjct: 3024 IRQKKNVKGKNFVHLFVANIDEAVMYPVLNEM 3055


>UniRef50_A2DND1 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 393

 Score = 32.7 bits (71), Expect = 8.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 175 FITLNEYVLYLKPLYL*ILRTIYEKS*FIKYIKHDTKFYFNYENRLKTLW 26
           F++ NEY LY KPLYL +    Y    F+ ++     +YF +    K LW
Sbjct: 213 FLSTNEYQLYRKPLYLVLTNVFYILMFFVTFL---LVYYFEF----KVLW 255


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,584,707
Number of Sequences: 1657284
Number of extensions: 11064312
Number of successful extensions: 23161
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23158
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)