Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30192
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -3

Query: 348 HLNQTAFHFSNSFFYFVSQIEFEKKLAW 265
           H   T+++ SN  ++F +  EFEK++AW
Sbjct: 75  HELMTSWNISNCEWFFHNLTEFEKRVAW 102


>Z83239-8|CAH60787.1|  311|Caenorhabditis elegans Hypothetical
           protein T09F5.16 protein.
          Length = 311

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 75  CFIYLMNYDFSYIVRSIHKYNGFKYNTYSFSVIKYRVVFILEHVYATWINDY 230
           C  ++ NY+  Y+  S+   N    N Y   +IK  ++ IL ++Y   I  Y
Sbjct: 118 CLYFMPNYE-KYLNISVEALNVVVRNLYICFIIKSVMLIILPYIYTANILTY 168


>Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical
           protein ZK675.2 protein.
          Length = 1027

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 628 HLKKDIHCFILNTIRFNSRGETLFGLSDIFASLPK 524
           H++K + C I   IRF  RGE +  ++ I A L +
Sbjct: 685 HVRKSVSCDINYGIRFTKRGEVIQLMTAIGAELER 719


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,657,171
Number of Sequences: 27780
Number of extensions: 290812
Number of successful extensions: 641
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 641
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)