BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30191X (300 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1F12.02c |p23fy||translationally controlled tumor protein ho... 75 2e-15 SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 26 1.4 SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 24 4.2 SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 24 5.5 SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 24 5.5 SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |S... 23 7.3 SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|ch... 23 7.3 SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosacch... 23 7.3 SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family |Schizos... 23 7.3 SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 23 7.3 SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 23 7.3 SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 23 9.6 SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 23 9.6 >SPAC1F12.02c |p23fy||translationally controlled tumor protein homolog|Schizosaccharomyces pombe|chr 1|||Manual Length = 168 Score = 74.9 bits (176), Expect = 2e-15 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 1/94 (1%) Frame = +3 Query: 12 MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQ-GDIQIEGFNPSAEEADEGTD 188 M +YKD+I+GDE+ SD Y +K VD+++YE ++VT Q GD+ I G NPSAE+A+E + Sbjct: 1 MLLYKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVDI-GANPSAEDAEENAE 59 Query: 189 SAVESGVDIVLNHRLVETYAFGTRNPTHCLKNYM 290 E+ ++V + RL T +F ++ +K YM Sbjct: 60 EGTETVNNLVYSFRLSPT-SFDKKSYMSYIKGYM 92 >SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6 |Schizosaccharomyces pombe|chr 2|||Manual Length = 675 Score = 25.8 bits (54), Expect = 1.4 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = -2 Query: 227 VVQDYVNSALDGRVRALVSLFSRRIKTLDLDIT 129 V++D +NS LDG + + S R +T LD++ Sbjct: 341 VLEDQMNSLLDGSLYGICRPLSSRAQTSVLDLS 373 >SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 474 Score = 24.2 bits (50), Expect = 4.2 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -2 Query: 122 SRHQPTGHFVNNFIDQFHFVSVREHLITSD 33 SRH+ HFV +F D ++ V E+ D Sbjct: 65 SRHRNIIHFVESFEDNVYYYVVLEYCPLGD 94 >SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces pombe|chr 1|||Manual Length = 1388 Score = 23.8 bits (49), Expect = 5.5 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%) Frame = +3 Query: 54 SDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEE-----ADEGTDSAVES-GVDI 215 S+TY + DE+ + D E F EE A E ++ ++ +D+ Sbjct: 139 SNTY---VQDEIRFSSRNSKGVNYNEDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDV 195 Query: 216 VLNHRLVE 239 VL+HRL+E Sbjct: 196 VLDHRLIE 203 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 23.8 bits (49), Expect = 5.5 Identities = 10/36 (27%), Positives = 17/36 (47%) Frame = +3 Query: 81 DEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTD 188 DEV + +G G+ ++ + EE+DE D Sbjct: 103 DEVFFSASGDATIHLSGNFLVDEEDEEEEESDEDYD 138 >SPAC14C4.03 |mek1||Cds1/Rad53/Chk2 family protein kinase Mek1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 445 Score = 23.4 bits (48), Expect = 7.3 Identities = 9/24 (37%), Positives = 17/24 (70%) Frame = +3 Query: 18 IYKDIITGDEMFSDTYKMKLVDEV 89 I+++++TG ++FS K+ V EV Sbjct: 233 IFEEMVTGGDLFSYLTKLGTVPEV 256 >SPAC23H3.14 |||LAlv9 family protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 469 Score = 23.4 bits (48), Expect = 7.3 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 Query: 123 LSSPTYRSLRK*LHRPIS 70 +SSP+ SL K LH+P S Sbjct: 215 VSSPSAHSLEKSLHKPAS 232 >SPAC29B12.10c |||OPT oligopeptide transporter family|Schizosaccharomyces pombe|chr 1|||Manual Length = 851 Score = 23.4 bits (48), Expect = 7.3 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 144 EGFNPSAEEADEGTDSAVESGVD 212 +G + SA + D TDS VES V+ Sbjct: 98 DGVHVSAVQLDNETDSEVESEVE 120 >SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family |Schizosaccharomyces pombe|chr 1|||Manual Length = 209 Score = 23.4 bits (48), Expect = 7.3 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = -2 Query: 227 VVQDYVNSALDGRVRALVSLFSRRIKTLDLDITLCS 120 ++Q V++ L+ R L ++R+ LD+D CS Sbjct: 18 ILQGSVDTNLNETGRLQAKLLAQRLLPLDIDQIFCS 53 >SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pombe|chr 3|||Manual Length = 1066 Score = 23.4 bits (48), Expect = 7.3 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +3 Query: 78 VDEVIYEVTGRLVTRAQGDIQIEG 149 +D V +EV R +A+ D Q+EG Sbjct: 386 IDAVPFEVPQRSAIKARDDEQVEG 409 >SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr 3|||Manual Length = 752 Score = 23.4 bits (48), Expect = 7.3 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +3 Query: 30 IITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEG 182 II G+E+ + K + V + T A+GDI + E +EG Sbjct: 557 IIEGEELLEEMKKRENVKHNSQNFASPMQTDAEGDIVQNEEEKESVEVEEG 607 >SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharomyces pombe|chr 1|||Manual Length = 249 Score = 23.0 bits (47), Expect = 9.6 Identities = 7/24 (29%), Positives = 15/24 (62%) Frame = +1 Query: 79 SMKLFTK*PVGW*REHRVISRSRV 150 ++K+ +GW R HR + R+++ Sbjct: 91 TIKILKTQDIGWIRHHRNVERAKI 114 >SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 225 Score = 23.0 bits (47), Expect = 9.6 Identities = 8/19 (42%), Positives = 15/19 (78%) Frame = +3 Query: 114 VTRAQGDIQIEGFNPSAEE 170 +TRA+ +Q++G NP +E+ Sbjct: 128 LTRAEYILQLQGINPVSED 146 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,167,643 Number of Sequences: 5004 Number of extensions: 19910 Number of successful extensions: 51 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 51 length of database: 2,362,478 effective HSP length: 63 effective length of database: 2,047,226 effective search space used: 73700136 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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