Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30191X
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA...   138   2e-33
AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p pro...   136   6e-33
BT024231-1|ABC86293.1|  397|Drosophila melanogaster LD28546p pro...    28   1.9  
AY089520-1|AAL90258.1|  217|Drosophila melanogaster GM13209p pro...    28   1.9  
AL009196-2|CAA15712.1|  394|Drosophila melanogaster EG:25E8.2 pr...    28   1.9  
AF537092-1|AAO85551.1|  384|Drosophila melanogaster ubiquitin co...    28   1.9  
AE014298-377|AAF45767.1|  397|Drosophila melanogaster CG2924-PC,...    28   1.9  
AE014298-376|AAF45768.2|  397|Drosophila melanogaster CG2924-PA,...    28   1.9  
BT016116-1|AAV37001.1|  875|Drosophila melanogaster LD10035p pro...    26   7.7  
AF099909-1|AAD13219.1|  875|Drosophila melanogaster topoisomeras...    26   7.7  
AE014298-867|AAF46144.1|  875|Drosophila melanogaster CG3458-PA ...    26   7.7  

>AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA
           protein.
          Length = 172

 Score =  138 bits (333), Expect = 2e-33
 Identities = 68/96 (70%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MKIYKDIITGDEMF+DTYKMKLVD+VIYEV G+L+TR   DI++EG N SAEEADEGTD 
Sbjct: 1   MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60

Query: 192 AVESGVDIVLNHRLVETYAFGTRNP-THCLKNYM*K 296
             ESGVD+VLNHRL E +AFG +   T  LK+YM K
Sbjct: 61  TSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKK 96


>AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p
           protein.
          Length = 172

 Score =  136 bits (328), Expect = 6e-33
 Identities = 67/96 (69%), Positives = 77/96 (80%), Gaps = 1/96 (1%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MKIYKDIITGDEMF+DTYKMKLVD+VIYEV G+L+TR   DI++EG N SAEEADEGTD 
Sbjct: 1   MKIYKDIITGDEMFADTYKMKLVDDVIYEVYGKLITRQGDDIKLEGANASAEEADEGTDI 60

Query: 192 AVESGVDIVLNHRLVETYAFGTRNP-THCLKNYM*K 296
             ESGVD+VLNHRL E +AFG +   T  L +YM K
Sbjct: 61  TSESGVDVVLNHRLTECFAFGDKKSYTLYLNDYMKK 96


>BT024231-1|ABC86293.1|  397|Drosophila melanogaster LD28546p
           protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 192 AVESGVDIVLNHRLVETYAF 251
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


>AY089520-1|AAL90258.1|  217|Drosophila melanogaster GM13209p
           protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 48  MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 105

Query: 192 AVESGVDIVLNHRLVETYAF 251
                  I+LN    ETY F
Sbjct: 106 -------ILLNILFKETYPF 118


>AL009196-2|CAA15712.1|  394|Drosophila melanogaster EG:25E8.2
           protein.
          Length = 394

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 192 AVESGVDIVLNHRLVETYAF 251
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


>AF537092-1|AAO85551.1|  384|Drosophila melanogaster ubiquitin
           conjugating enzyme E2 protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 215 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 272

Query: 192 AVESGVDIVLNHRLVETYAF 251
                  I+LN    ETY F
Sbjct: 273 -------ILLNILFKETYPF 285


>AE014298-377|AAF45767.1|  397|Drosophila melanogaster CG2924-PC,
           isoform C protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 192 AVESGVDIVLNHRLVETYAF 251
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


>AE014298-376|AAF45768.2|  397|Drosophila melanogaster CG2924-PA,
           isoform A protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 27/80 (33%), Positives = 36/80 (45%)
 Frame = +3

Query: 12  MKIYKDIITGDEMFSDTYKMKLVDEVIYEVTGRLVTRAQGDIQIEGFNPSAEEADEGTDS 191
           MK  +DI   D    + Y ++LV+E IYE   RL +    D  +       +E  EG DS
Sbjct: 228 MKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKS-VDPDSPLHSDLQMLKE-KEGKDS 285

Query: 192 AVESGVDIVLNHRLVETYAF 251
                  I+LN    ETY F
Sbjct: 286 -------ILLNILFKETYPF 298


>BT016116-1|AAV37001.1|  875|Drosophila melanogaster LD10035p
           protein.
          Length = 875

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 125 CSRHQPTGHFVNNFIDQFHFVSVREHLITSD 33
           CS H+ TG+F N     F   SV  H+++ D
Sbjct: 36  CSTHEWTGNFRNEGSVHFRMTSVCGHVMSLD 66


>AF099909-1|AAD13219.1|  875|Drosophila melanogaster topoisomerase
           III protein.
          Length = 875

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 125 CSRHQPTGHFVNNFIDQFHFVSVREHLITSD 33
           CS H+ TG+F N     F   SV  H+++ D
Sbjct: 36  CSTHEWTGNFRNEGSVHFRMTSVCGHVMSLD 66


>AE014298-867|AAF46144.1|  875|Drosophila melanogaster CG3458-PA
           protein.
          Length = 875

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 125 CSRHQPTGHFVNNFIDQFHFVSVREHLITSD 33
           CS H+ TG+F N     F   SV  H+++ D
Sbjct: 36  CSTHEWTGNFRNEGSVHFRMTSVCGHVMSLD 66


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,307,366
Number of Sequences: 53049
Number of extensions: 203961
Number of successful extensions: 498
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)