BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30190 (706 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_01_0548 + 4099386-4099847,4100435-4101316 95 6e-20 03_01_0547 + 4093196-4093657,4094267-4095148 95 6e-20 03_01_0544 + 4082528-4082989,4083585-4084466 95 6e-20 03_01_0543 + 4076981-4077442,4078145-4079026 95 6e-20 04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 32 0.39 04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 31 1.2 01_05_0589 + 23459847-23460344,23460493-23461296 31 1.2 07_03_0724 + 20975942-20976867,20977397-20977476,20977976-209783... 29 2.7 05_06_0124 - 25822176-25822633,25822738-25825420 29 2.7 03_06_0422 + 33818887-33819996 29 2.7 02_05_0801 + 31824548-31825064,31825231-31826171 29 2.7 01_06_0017 + 25592255-25593730 29 3.6 01_05_0587 + 23452275-23453759 29 3.6 01_06_0018 + 25609571-25611061 29 4.8 11_04_0340 - 16536571-16536705,16536820-16536951,16537265-165381... 28 6.3 >03_01_0548 + 4099386-4099847,4100435-4101316 Length = 447 Score = 94.7 bits (225), Expect = 6e-20 Identities = 39/64 (60%), Positives = 51/64 (79%) Frame = +1 Query: 511 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 690 QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399 Query: 691 VESF 702 VE+F Sbjct: 400 VETF 403 Score = 35.9 bits (79), Expect = 0.031 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +2 Query: 443 SKNNPPKGAADFTAQVIVLNHP 508 SK++P K AA FT+QVI++NHP Sbjct: 317 SKDDPAKEAASFTSQVIIMNHP 338 >03_01_0547 + 4093196-4093657,4094267-4095148 Length = 447 Score = 94.7 bits (225), Expect = 6e-20 Identities = 39/64 (60%), Positives = 51/64 (79%) Frame = +1 Query: 511 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 690 QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399 Query: 691 VESF 702 VE+F Sbjct: 400 VETF 403 Score = 35.9 bits (79), Expect = 0.031 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +2 Query: 443 SKNNPPKGAADFTAQVIVLNHP 508 SK++P K AA FT+QVI++NHP Sbjct: 317 SKDDPAKEAASFTSQVIIMNHP 338 >03_01_0544 + 4082528-4082989,4083585-4084466 Length = 447 Score = 94.7 bits (225), Expect = 6e-20 Identities = 39/64 (60%), Positives = 51/64 (79%) Frame = +1 Query: 511 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 690 QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399 Query: 691 VESF 702 VE+F Sbjct: 400 VETF 403 Score = 35.9 bits (79), Expect = 0.031 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +2 Query: 443 SKNNPPKGAADFTAQVIVLNHP 508 SK++P K AA FT+QVI++NHP Sbjct: 317 SKDDPAKEAASFTSQVIIMNHP 338 >03_01_0543 + 4076981-4077442,4078145-4079026 Length = 447 Score = 94.7 bits (225), Expect = 6e-20 Identities = 39/64 (60%), Positives = 51/64 (79%) Frame = +1 Query: 511 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 690 QI NGY PVLDCHT+HIA KFAE+ K+DRR+GK E PK +K+GDA +V ++P+KP+ Sbjct: 340 QIGNGYAPVLDCHTSHIAVKFAELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMV 399 Query: 691 VESF 702 VE+F Sbjct: 400 VETF 403 Score = 35.9 bits (79), Expect = 0.031 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +2 Query: 443 SKNNPPKGAADFTAQVIVLNHP 508 SK++P K AA FT+QVI++NHP Sbjct: 317 SKDDPAKEAASFTSQVIIMNHP 338 >04_04_1593 - 34661670-34661798,34661882-34661989,34662129-34662368, 34662614-34662782,34662872-34663362,34663681-34663991, 34664396-34664473,34665034-34665228,34665363-34665524, 34665759-34665840 Length = 654 Score = 32.3 bits (70), Expect = 0.39 Identities = 12/48 (25%), Positives = 28/48 (58%) Frame = +1 Query: 559 IACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESF 702 ++ +I ++++TGK+++ P+ + S A++ + K +CVE F Sbjct: 577 VSASMVKILSLLEQKTGKASKKIPRFLTSRQTAVIEVKLEKEVCVEEF 624 >04_03_0107 + 11328267-11328276,11329059-11329170,11329862-11329907, 11330185-11330256,11332292-11332303,11332880-11332942, 11333038-11333192,11333303-11333367,11334645-11334795, 11335230-11335335,11335440-11335575,11336310-11336374, 11337003-11337188,11337298-11337399 Length = 426 Score = 30.7 bits (66), Expect = 1.2 Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 7/67 (10%) Frame = +1 Query: 523 GYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-------IKSGDAAIVNLVPSK 681 GY VL H+ C+ ++ E++D + K + K +K+G + + + Sbjct: 337 GYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKKKKPKRKPLFVKNGAVVVCRIQVNN 396 Query: 682 PLCVESF 702 +C+E+F Sbjct: 397 LICIENF 403 >01_05_0589 + 23459847-23460344,23460493-23461296 Length = 433 Score = 30.7 bits (66), Expect = 1.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +2 Query: 485 QVIVLNHPVKSQTVTHQCWIATLPTLPA 568 QV+VLNHP VTH W +TL + A Sbjct: 299 QVLVLNHPAVGVFVTHCGWNSTLEAVSA 326 >07_03_0724 + 20975942-20976867,20977397-20977476,20977976-20978370, 20988410-20989444 Length = 811 Score = 29.5 bits (63), Expect = 2.7 Identities = 22/69 (31%), Positives = 35/69 (50%) Frame = -3 Query: 308 SQSDGTVFEQEGTLKNEGKKKNPWLLEVNFLGWVQTALPIP*LLWLMKMVTNQK*SKVPA 129 +Q GT+ E G+L N N L+ NF G ++ +L L +MK+ N ++PA Sbjct: 388 NQLTGTIPESFGSLMN---LTNLVLMANNFSGEIRASLAQLPSLVIMKLFENNLSGQLPA 444 Query: 128 ELYRQQYFI 102 EL + F+ Sbjct: 445 ELGKHSPFL 453 >05_06_0124 - 25822176-25822633,25822738-25825420 Length = 1046 Score = 29.5 bits (63), Expect = 2.7 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = -3 Query: 308 SQSDGTVFEQEGTLKNEGKKKNPWLLEVNFLGWVQTALPIP*LLWLMKMVTNQK*SKVPA 129 +Q GT+ E G+L N N L+ NF G + +L L +MK+ N ++PA Sbjct: 305 NQLTGTIPESFGSLMN---LTNLALMTNNFSGEIPASLAQLPSLVIMKLFENNLTGQIPA 361 Query: 128 ELYRQQYFI 102 EL + F+ Sbjct: 362 ELGKHSPFL 370 >03_06_0422 + 33818887-33819996 Length = 369 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/55 (25%), Positives = 25/55 (45%) Frame = +1 Query: 379 GREAATIPTKHNANNNFIFDWIQKQPT*GCCRFYSSSHCA*PSCQISNGYTPVLD 543 G EA +P +H ++ I W++ + CRF + + C+ + G V D Sbjct: 265 GTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLPTEESKNPCESAGGIVSVND 319 >02_05_0801 + 31824548-31825064,31825231-31826171 Length = 485 Score = 29.5 bits (63), Expect = 2.7 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 470 ADFTAQVIVLNHPVKSQTVTHQCWIATLPTLPA 568 A + Q VLNHP +TH W +TL +L A Sbjct: 360 ASWCPQQDVLNHPAVGAFLTHSGWNSTLESLAA 392 >01_06_0017 + 25592255-25593730 Length = 491 Score = 29.1 bits (62), Expect = 3.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 485 QVIVLNHPVKSQTVTHQCWIATLPTLPA 568 Q+++LNHP VTH W +TL + A Sbjct: 355 QMLILNHPAVGGFVTHCGWNSTLEAVTA 382 >01_05_0587 + 23452275-23453759 Length = 494 Score = 29.1 bits (62), Expect = 3.6 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 485 QVIVLNHPVKSQTVTHQCWIATLPTLPA 568 Q+++LNHP VTH W +TL + A Sbjct: 358 QMLILNHPAVGGFVTHCGWNSTLEAVSA 385 >01_06_0018 + 25609571-25611061 Length = 496 Score = 28.7 bits (61), Expect = 4.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +2 Query: 485 QVIVLNHPVKSQTVTHQCWIATLPTLPA 568 QV+VLNHP VTH W + L + A Sbjct: 360 QVLVLNHPAVGGFVTHCGWNSVLEAVSA 387 >11_04_0340 - 16536571-16536705,16536820-16536951,16537265-16538106, 16538480-16538940,16539032-16540314,16540423-16541627, 16541857-16542157 Length = 1452 Score = 28.3 bits (60), Expect = 6.3 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%) Frame = +2 Query: 419 ITISFSIGSKNNPPKGAADFTAQV---IVLNHPVKSQTVTHQCWIATLPTLP 565 + IS S+G +N G D T +V++HP+ + I+ +PTLP Sbjct: 984 LQISTSLGDRNESLSGLHDLTIHDCPRLVVSHPLPFSAQMRRFSISGIPTLP 1035 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,516,932 Number of Sequences: 37544 Number of extensions: 467327 Number of successful extensions: 1253 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1208 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1252 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 1815633512 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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