Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30190
(706 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 126 3e-31
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 124 6e-31
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 110 1e-26
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 33 0.002
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 4.9
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 4.9
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 4.9
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 4.9
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 4.9
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 4.9
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 4.9
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 4.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 4.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 4.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 4.9
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 4.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.9
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 4.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 4.9
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.5
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 6.5
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 126 bits (303), Expect = 3e-31
Identities = 57/65 (87%), Positives = 61/65 (93%)
Frame = +1
Query: 511 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 690
QISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+C
Sbjct: 352 QISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMC 411
Query: 691 VESFQ 705
VE+FQ
Sbjct: 412 VEAFQ 416
Score = 47.6 bits (108), Expect = 1e-07
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2
Query: 443 SKNNPPKGAADFTAQVIVLNHP 508
SKN PP+GAADFTAQVIVLNHP
Sbjct: 329 SKNQPPRGAADFTAQVIVLNHP 350
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 124 bits (300), Expect = 6e-31
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +1
Query: 511 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 690
QISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C
Sbjct: 352 QISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMC 411
Query: 691 VESFQ 705
E+FQ
Sbjct: 412 AEAFQ 416
Score = 51.2 bits (117), Expect = 9e-09
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 443 SKNNPPKGAADFTAQVIVLNHP 508
SKNNPPKGAADFTAQVIVLNHP
Sbjct: 329 SKNNPPKGAADFTAQVIVLNHP 350
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 110 bits (264), Expect = 1e-26
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1
Query: 511 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 681
QISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 63 QISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
Score = 47.6 bits (108), Expect = 1e-07
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +2
Query: 443 SKNNPPKGAADFTAQVIVLNHP 508
SKN PP+GAADFTAQVIVLNHP
Sbjct: 40 SKNQPPRGAADFTAQVIVLNHP 61
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 33.5 bits (73), Expect = 0.002
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -2
Query: 249 EESLAVRGKFSWVGPDGVTYTVTFVADEDGYQ 154
E + +G S+ PDG ++T+VADE+G+Q
Sbjct: 66 ETPVVSQGSDSYTAPDGQQVSITYVADENGFQ 97
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 522 RLHTSVGLPHCPHC 563
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 77 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 124
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 310 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 357
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.9
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 326 REHRIIPSHYIEQIPVPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 373
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 6.5
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 10/48 (20%)
Frame = +2
Query: 290 RSHQI---GYIQICNYPVHYAHF-------RSWLAEPHQVDGKRQLFP 403
R H+I YI+ PV+Y +F R W+ QV G R + P
Sbjct: 325 REHRIIPSHYIEQIPAPVYYGNFPPRPIMVRPWVPMRGQVPGSRHIGP 372
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 118 RYSSAGTLLYFWLVTIF 168
R+ AGTLL W++ F
Sbjct: 173 RWELAGTLLLVWILCYF 189
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,727
Number of Sequences: 438
Number of extensions: 5072
Number of successful extensions: 33
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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