Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30188
(792 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 158 1e-37
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 156 5e-37
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 151 3e-35
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 94 4e-18
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 92 2e-17
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 82 1e-14
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 81 3e-14
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 81 3e-14
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 79 1e-13
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 79 1e-13
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 78 2e-13
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 78 2e-13
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 75 3e-12
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 72 2e-11
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 70 6e-11
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 68 2e-10
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 64 5e-09
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 61 3e-08
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 50 5e-05
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 49 1e-04
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 45 0.002
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 45 0.002
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 43 0.008
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.010
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.010
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 42 0.013
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 39 0.12
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 38 0.38
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 37 0.50
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 37 0.67
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 36 0.88
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 36 1.5
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 36 1.5
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 35 2.0
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 35 2.0
UniRef50_UPI00005F8BDE Cluster: COG0642: Signal transduction his... 35 2.7
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 35 2.7
UniRef50_Q6CGS9 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 35 2.7
UniRef50_A2R416 Cluster: Contig An14c0190, complete genome; n=1;... 35 2.7
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 35 2.7
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 34 4.7
UniRef50_A7MRT7 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;... 33 6.2
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 33 8.2
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 33 8.2
UniRef50_Q21305 Cluster: Sox (Mammalian sry box) family protein ... 33 8.2
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 33 8.2
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 33 8.2
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 158 bits (384), Expect = 1e-37
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDK
Sbjct: 118 EKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYKVKRN WP VRGV
Sbjct: 178 PILKAGRAYHKYKVKRNSWPKVRGV 202
Score = 101 bits (243), Expect = 2e-20
Identities = 46/62 (74%), Positives = 50/62 (80%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGSTQANLFIVE 433
LD+AER GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG
Sbjct: 32 LDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCG 91
Query: 434 RK 439
RK
Sbjct: 92 RK 93
Score = 72.1 bits (169), Expect = 1e-11
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLE K
Sbjct: 82 MHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEK 119
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIRAQRKGAGSVF +H KKRKGA KLRS
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRS 31
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 156 bits (379), Expect = 5e-37
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 5e-18
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 69.7 bits (163), Expect = 8e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 151 bits (365), Expect = 3e-35
Identities = 66/80 (82%), Positives = 75/80 (93%)
Frame = +3
Query: 525 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 704
RG+LARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAGGGRIDKP+LKA
Sbjct: 99 RGKLARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKA 158
Query: 705 GRAYHKYKVKRNCWPYVRGV 764
GRAYHKYK KRNCWP VRGV
Sbjct: 159 GRAYHKYKAKRNCWPKVRGV 178
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/50 (78%), Positives = 44/50 (88%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGY+KGVVKDI+HDPGRGAPLA V FRDPYK+K R E FIA EG
Sbjct: 32 VDFAERHGYVKGVVKDIVHDPGRGAPLAKVTFRDPYKYKMRTETFIATEG 81
Score = 48.0 bits (109), Expect = 3e-04
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR+QRKG GSVF +HTK RKG LR+
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRA 31
Score = 35.9 bits (79), Expect = 1.2
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEV 453
+YTGQF+YCGKKA L++
Sbjct: 82 MYTGQFIYCGKKANLQI 98
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 93.9 bits (223), Expect = 4e-18
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G+LAR +G++A V+G +T ++LPSG K +P+ +R +GI AG GRI+KPI+
Sbjct: 113 GDGGKLARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIM 170
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG AYHK+KVK WP VRGV
Sbjct: 171 KAGFAYHKWKVKARKWPRVRGV 192
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +1
Query: 346 LPRSIQVQDKEGALHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
L R ++ E + + +Y GQ + G A E GN++P+G +PEGT V N+E
Sbjct: 55 LARVVREDGVEFLMPAAEGMYVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVE 109
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 91.9 bits (218), Expect = 2e-17
Identities = 42/84 (50%), Positives = 56/84 (66%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
++ GD G+ ARA G +A VIG P+ +T ++LPSG + S R VGIVAGGGRI+K
Sbjct: 110 KRAGDGGKFARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEK 169
Query: 690 PILKAGRAYHKYKVKRNCWPYVRG 761
P LKAG+ YH+ + K +P VRG
Sbjct: 170 PFLKAGKKYHRARAKAWKYPTVRG 193
Score = 44.4 bits (100), Expect = 0.003
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +1
Query: 388 HCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
+ + LY GQ V GK A+ + GN+M +G +PEGT++ N+E++
Sbjct: 69 YAAEGLYVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKR 111
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GD G+LAR++G F V+ H+ T++KLPS K+L S R +G+VAGGG+ +K
Sbjct: 144 EKEGDGGKLARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKYEK 203
Query: 690 PILKAGRAYHKYKVKRNCWPYVR 758
P+LKAG+ Y+K+K +P V+
Sbjct: 204 PLLKAGKNYYKFKSLNKKYPIVK 226
Score = 39.5 bits (88), Expect = 0.095
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 400 RLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
+LY + + CG +A GNV+P+ +P G VCN+E K
Sbjct: 107 KLYLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEK 145
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 81.0 bits (191), Expect = 3e-14
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G+LAR+ G +A ++G + ++ ++LPSG K + + R +GI AG GR +KP+L
Sbjct: 117 GDGGKLARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPLL 174
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG AY+K+K K WP VRGV
Sbjct: 175 KAGNAYYKWKAKAKKWPVVRGV 196
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
+YTGQ V G A GN++P+ A+PEGT + N+E
Sbjct: 78 MYTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVE 113
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 81.0 bits (191), Expect = 3e-14
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G+ AR++G + V+G D + VKL S + S+ R +VG+VAGGG +KP+L
Sbjct: 112 GDGGKFARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLL 169
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG Y KYKVK WP+VRGV
Sbjct: 170 KAGNNYWKYKVKAKKWPHVRGV 191
Score = 41.9 bits (94), Expect = 0.018
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLER 513
L GQ + GK A + GN++ VG +PEGTI+ N+E+
Sbjct: 73 LVVGQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEK 109
Score = 33.1 bits (72), Expect = 8.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 287 GVVKDIIHDPGRGAPLAVVHFRDPYKF 367
G V DI+H+PG APLA++ D KF
Sbjct: 39 GKVIDIVHNPGTNAPLALIKLDDGTKF 65
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G+ ARA G +AT+I H D RT V+LPSG + R +G+++GGG+ +KP +
Sbjct: 117 GDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPFV 174
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG+ Y+ + K WP VRGV
Sbjct: 175 KAGKKYYHMRSKGGKWPKVRGV 196
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 257 DYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGS 406
D E+ G + G V +++HDP R AP+A V F D + L + PEG+
Sbjct: 34 DEQEKKGKVVGKVVELLHDPARNAPVARVRFED-----GEERLILVPEGT 78
Score = 34.3 bits (75), Expect = 3.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 412 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
G + CG A ++ GN +P+ +PEG + N+E
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIE 113
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 79.0 bits (186), Expect = 1e-13
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = +3
Query: 513 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKP 692
K D G+ R+SG +ATV+ H +A RT V +PSG K L R +VGIVAG GR+D+P
Sbjct: 112 KPNDGGKFVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRP 169
Query: 693 ILKAGRAYHKYKVKRNCWPYVRGV 764
LKAG+ YHK K + +P V V
Sbjct: 170 WLKAGKKYHKMKTRAAKYPRVSAV 193
Score = 44.8 bits (101), Expect = 0.003
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +1
Query: 385 LHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
L S + G + CG A ++ GN++P+G +PEG +CN+E K
Sbjct: 69 LLASEGIAVGNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESK 112
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 78.2 bits (184), Expect = 2e-13
Identities = 35/62 (56%), Positives = 45/62 (72%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGSTQANLFIVE 433
LD+ ER+GY+KGVV +IIHDPGRGAPLA V FR P++FK +KELF+ E T +
Sbjct: 32 LDFGERNGYLKGVVTEIIHDPGRGAPLARVTFRHPFRFKKQKELFVXXEVCTPVSSLYCG 91
Query: 434 RK 439
+K
Sbjct: 92 KK 93
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIRAQRK AGSVF SHT RKG K RS
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRS 31
Score = 41.1 bits (92), Expect = 0.031
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +1
Query: 421 VYCGKKATLEVGNVMPVGAMPEG 489
+YCGKKATL VGNV+P+ ++PEG
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEG 110
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/82 (43%), Positives = 53/82 (64%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G A +G+++ V+ H + T +K+PSG K + S R +VG+VAGGG DKP+L
Sbjct: 107 GDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLL 166
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KA A++K K + + +P VRGV
Sbjct: 167 KASVAHYKAKARGHVFPRVRGV 188
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 358 IQVQDKEGALHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
I ++ + + S +YTGQ + G A +++GN+ + +PEG V ++E
Sbjct: 53 ISFKEDDCMVPASEGMYTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVE 103
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 74.5 bits (175), Expect = 3e-12
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G+L RASG+FA ++ D + V+LPSG K L ++ R ++G++AGGGR +KP +
Sbjct: 114 GDGGKLVRASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFV 171
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG Y+ + WP V GV
Sbjct: 172 KAGNKYYWASSRNRHWPVVNGV 193
Score = 33.1 bits (72), Expect = 8.2
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 412 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
G VY GK+A +G++ P+ +PEGT + LE
Sbjct: 78 GDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLE 110
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 71.7 bits (168), Expect = 2e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRK 379
+D+AERHGYI+GVVK+IIHDPGRGAPLA V FRD Y +K K
Sbjct: 28 VDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFRDVYSYKLIK 69
Score = 43.2 bits (97), Expect = 0.008
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 174 IRAQRKGAGSVFVSHTKKRKGAPKLR 251
IR+QRKGAG VF +HTK RKGA +LR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLR 26
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 70.1 bits (164), Expect = 6e-11
Identities = 28/49 (57%), Positives = 39/49 (79%)
Frame = +1
Query: 370 DKEGALHCSRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
DKE + C+ LY+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K
Sbjct: 63 DKELFI-CAEGLYSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESK 110
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = +3
Query: 513 KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAK 623
K GDRG +ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 110 KPGDRGIIARASGNYATVISHNADNETTRIRLPSGAK 146
Score = 54.0 bits (124), Expect = 4e-06
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = +2
Query: 284 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+G+VK I HDPGRGAPLA V FR+P ++ KELFI EG
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEG 72
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/82 (40%), Positives = 46/82 (56%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G + +++G ATV H + VKLPSG L NR M+G +AGGG ++P +
Sbjct: 115 GDGGAIVKSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTLAGGGASERPFM 172
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
AG + +K K +P VRGV
Sbjct: 173 SAGGKWRNFKAKGKKYPIVRGV 194
Score = 38.7 bits (86), Expect = 0.17
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +1
Query: 412 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLER 513
G+ + G K+ +E GNV+ + +P+GTIVCN+E+
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEK 112
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/82 (39%), Positives = 46/82 (56%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G + +++G ATV H +KLPSG L NR MVG +AGGG ++P +
Sbjct: 114 GDGGAIVKSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTLAGGGVSERPFM 171
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
AG + +++ K +P VRGV
Sbjct: 172 SAGGKWRRFRSKGRKYPIVRGV 193
Score = 33.5 bits (73), Expect = 6.2
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 412 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERKW 519
G + G K+ + GNV+ V +P+GT VCN+E+ +
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHY 113
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 61.3 bits (142), Expect = 3e-08
Identities = 37/83 (44%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
GD G R++G FA V+ H R +KLPSG+ + R VG+VA G ID PIL
Sbjct: 109 GDGGEFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPIL 165
Query: 699 KAGRAYHKYKVKRNCWPY-VRGV 764
KAG H + K PY VRGV
Sbjct: 166 KAGTHVHYLRSKAK-RPYTVRGV 187
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 50.4 bits (115), Expect = 5e-05
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
Score = 33.1 bits (72), Expect = 8.2
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 254 LDYAERHGYIKGVVK 298
+D+AERHGYIKG+VK
Sbjct: 32 VDFAERHGYIKGIVK 46
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = -2
Query: 764 HTTYIWPAVTFDLVLVVCPSSFQNRFVNTSTSSNNTDHASVA*WQNLL 621
HT + WPA+ L+LV+ + QN VN +TSS++TDH+ V +LL
Sbjct: 57 HTPHAWPAIPLGLILVIGTAGLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G RG+L +A+G FA ++ +P+ K+ +KL SG + + + +G+V+
Sbjct: 237 GGRGQLVKAAGTFARLLSKHPEEKKVVIKLSSGEHRYVHMNCHATLGVVSNKEHQAISWG 296
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAGR+ H+ K P VRGV
Sbjct: 297 KAGRSRHRGK-----RPMVRGV 313
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/82 (35%), Positives = 47/82 (57%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G +LARA+G +A +I A + V+LPSG +K++ S R +GIV+ + +
Sbjct: 383 GQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLR 440
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG++ ++ +R P VRGV
Sbjct: 441 KAGQS--RWSGRR---PIVRGV 457
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.8 bits (101), Expect = 0.003
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEG 489
+YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 48 IYTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Frame = -2
Query: 707 SSFQNRFVNTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSIRIVS--NHSGEVSR 546
+S Q+ V+T+T+SNNT++ SV WQN L +RR L + T +R+ S N +V R
Sbjct: 30 TSLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVLRLASCQNDQSQVVR 85
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 43.2 bits (97), Expect = 0.008
Identities = 29/82 (35%), Positives = 46/82 (56%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G G++ RA+G +A V+ P AK ++LPSGA+K + S +GIV+ + +
Sbjct: 319 GQGGKMVRAAGTYAKVV-QEPGAKCV-LRLPSGAEKAVDSRCHATIGIVSNPSHGTRKLR 376
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG + ++ +R P VRGV
Sbjct: 377 KAG--HSRWLGRR---PVVRGV 393
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.010
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRK 233
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 42.7 bits (96), Expect = 0.010
Identities = 28/82 (34%), Positives = 44/82 (53%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G +L RA+G FA +I + + V+LPSG K++ S R +GIV+ +
Sbjct: 382 GQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFN 441
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG++ ++ +R P VRGV
Sbjct: 442 KAGQS--RWLGRR---PIVRGV 458
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 42.3 bits (95), Expect = 0.013
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G +L RA+G FA +I + + V+LPSG K++ S R VGIV+ + +
Sbjct: 344 GQGAKLIRAAGTFAQIIKKFENTPQCIVRLPSGVDKLIDSRCRATVGIVSNLHHGKRKLD 403
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG++ ++ +R P VRGV
Sbjct: 404 KAGQS--RWLGRR---PIVRGV 420
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 39.1 bits (87), Expect = 0.12
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = -1
Query: 510 LKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSGAMKSSFLVL 367
L +AHNGTL S R +I+N + L+TI++L V G + FL+L
Sbjct: 14 LNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHALGGDEQLFLML 61
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 37.5 bits (83), Expect = 0.38
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G G+L R++G FATVI ++ ++L SG +++ VG+ + + +
Sbjct: 235 GQGGQLCRSAGTFATVIAKERISQHVTIRLQSGEVRLIHKDCCATVGVASNPNHQYRQLG 294
Query: 699 KAGRA 713
KAGR+
Sbjct: 295 KAGRS 299
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 37.1 bits (82), Expect = 0.50
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 397 RRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
+RL G V G ++ GN MP+ +MP GTI+ N+E
Sbjct: 108 QRLAVGDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVE 145
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 36.7 bits (81), Expect = 0.67
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +3
Query: 528 GRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAG 707
G+ R++G +A V+ P+ K+ V+L SG + + +G+V+ ++ + KAG
Sbjct: 263 GKFCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAG 322
Query: 708 RA 713
R+
Sbjct: 323 RS 324
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 36.3 bits (80), Expect = 0.88
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G + RA+G FA +I + R++LPSGA + S R +GIV+ +
Sbjct: 145 GQGAKFVRAAGTFAQLIQKHEAT--VRLRLPSGALASINSQCRATIGIVSNENHGKRNFR 202
Query: 699 KAGRAYHKYKVKRNCWPYVRGV 764
KAG++ ++ +R P VRGV
Sbjct: 203 KAGQS--RWLGRR---PVVRGV 219
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 35.5 bits (78), Expect = 1.5
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +3
Query: 516 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 695
+G G+LARA+G A +I + K +KLPSG +++ + VG V G K +
Sbjct: 16 LGRGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSL 73
Query: 696 LKAGRAYHKYKVKRNCWPYVRGV 764
GRA K + + P VRGV
Sbjct: 74 ---GRAGSKCWLGKR--PVVRGV 91
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 35.5 bits (78), Expect = 1.5
Identities = 29/83 (34%), Positives = 42/83 (50%)
Frame = +3
Query: 516 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 695
+G G+LARA+G A +I + K +KLPSG +++ + VG V G K +
Sbjct: 146 LGRGGQLARAAGAVAKLIAK--EGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSL 203
Query: 696 LKAGRAYHKYKVKRNCWPYVRGV 764
GRA K + + P VRGV
Sbjct: 204 ---GRAGSKCWLGKR--PVVRGV 221
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 394 SRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
S +L G FV G + GN +P+ ++P GT+V N+E
Sbjct: 201 SHQLKAGDFVSSGPNVEIRTGNALPLISIPLGTLVHNIE 239
Score = 33.9 bits (74), Expect = 4.7
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIG-HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 695
G G++ RA+G A +I HN K ++LPSG K P +GIV+ + +
Sbjct: 243 GSGGQVVRAAGTSAQLIKKHN---KYAILRLPSGELKSFPLQCMATIGIVSNLNHFNTDL 299
Query: 696 LKAGRAYHKYKVKRNCWPYVRGV 764
KAG + ++ +R P VRGV
Sbjct: 300 KKAGAS--RWLGRR---PTVRGV 317
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 35.1 bits (77), Expect = 2.0
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
L G V G +A ++VGN +P+ +P GT++ N+E K
Sbjct: 110 LEVGMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELK 147
>UniRef50_UPI00005F8BDE Cluster: COG0642: Signal transduction
histidine kinase; n=1; Yersinia frederiksenii ATCC
33641|Rep: COG0642: Signal transduction histidine kinase
- Yersinia frederiksenii ATCC 33641
Length = 1067
Score = 34.7 bits (76), Expect = 2.7
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = -3
Query: 442 LLSFHNKQIGLCRAFGSNEELLPCLELVWIAEVYNSQRCTSTRVMDYILNNSLDVSMTFS 263
L+ + N+Q R S + L L L+ +A Y ++ T R ++ S VSM FS
Sbjct: 38 LVGYVNEQEVFLRNLRSENQRLSTLPLLHVASFYEEKKLTDARGRLFVGRESR-VSMPFS 96
Query: 262 VI*ERSLGAPFL 227
V+ E G P L
Sbjct: 97 VVCENETGCPDL 108
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 34.7 bits (76), Expect = 2.7
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G ++ RA+G A ++ P + +KLPSG K + + R +G V+ K +
Sbjct: 37 GQGAKMVRAAGTNAKIL-KEPAKGKCLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLY 95
Query: 699 KAGRA 713
KAG++
Sbjct: 96 KAGQS 100
>UniRef50_Q6CGS9 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 210
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +3
Query: 318 VEVHLWLLYTSAIHTSSRQGRSSSLLPKALHRPICLLWKES-NS*SWKC-DACWSY 479
+ VH W+L + ++ +SS PK++ RP C + + NS WK ACW +
Sbjct: 134 IPVHAWILASRWHFFKAKLAKSSWTAPKSVSRPWCRTFMAAENSWIWKLPSACWGW 189
>UniRef50_A2R416 Cluster: Contig An14c0190, complete genome; n=1;
Aspergillus niger|Rep: Contig An14c0190, complete genome
- Aspergillus niger
Length = 759
Score = 34.7 bits (76), Expect = 2.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -3
Query: 601 TLVRLASGLCPITVAKFPEARARRPLSPIFSQDCTQWYPQA*LQQASHFQLQELLSFHN 425
T+ L+S L +TV P R P++ + QDC P + +Q+ASH Q ++ +
Sbjct: 152 TVYSLSSDLTSVTVCHDPSKRTSMPIA-LVDQDCLHHNPYSDIQEASHSTAQSSVNLED 209
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 34.7 bits (76), Expect = 2.7
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +3
Query: 519 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 698
G G++ARA+G +A V+G + V++PSG +++ VG V G + ++
Sbjct: 174 GKGGQIARAAGTWAQVLGRSTRKGYVLVRMPSGEVRMIHERCMATVGRV---GLAEHELV 230
Query: 699 KAGRA 713
K G+A
Sbjct: 231 KLGKA 235
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 33.9 bits (74), Expect = 4.7
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +3
Query: 525 RGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKA 704
R +L RA+G F ++G + + + +KL SG ++ + +G+V+ KA
Sbjct: 247 RSQLVRAAGTFGKILGKDQERQLAIIKLCSGEQRYISLDCHATLGVVSNKEHQLISWGKA 306
Query: 705 GRAYHKYKVKRNCWPYVRGV 764
GR +Y KR P VRG+
Sbjct: 307 GR--RRYLGKR---PVVRGM 321
>UniRef50_A7MRT7 Cluster: Putative uncharacterized protein; n=1;
Vibrio harveyi ATCC BAA-1116|Rep: Putative
uncharacterized protein - Vibrio harveyi ATCC BAA-1116
Length = 247
Score = 33.5 bits (73), Expect = 6.2
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 349 PRSIQVQDKEGALHCSRRLYTGQFVYCGKKATL-EVGNVMPVGAMPEGTIVCNLERKWV 522
PR I V + GAL+ R Y G + Y KA + +V V+ + P+G +VC + WV
Sbjct: 147 PRIITVSSQMGALN--RESY-GMYAYRSSKAAVNKVMQVLALELKPKGIVVCPIHPGWV 202
>UniRef50_A1W550 Cluster: ApbE family lipoprotein precursor; n=1;
Acidovorax sp. JS42|Rep: ApbE family lipoprotein
precursor - Acidovorax sp. (strain JS42)
Length = 362
Score = 33.5 bits (73), Expect = 6.2
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAK-RTRVKLPSGAKKVLPSSNRGMVGIVAGGGRID 686
E+ G L G+ V+G D R V+ PS ++L G+VA G +
Sbjct: 212 ERAGVTDALVNGGGD-VLVMGRQHDRPWRVGVRNPSAPAQLLGVLELQGRGVVASSGDYE 270
Query: 687 KPILKAGRAYHKYKVKRNCWP 749
+ L+AGR H R WP
Sbjct: 271 RGFLRAGRRLHHVLNPRTGWP 291
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 33.1 bits (72), Expect = 8.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = -1
Query: 510 LKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEPSGAMKSSFLVL 367
L +AHNGTL S R +I+N + L+ +++L V + FL+L
Sbjct: 26 LNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHALDGDEQLFLML 73
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 33.1 bits (72), Expect = 8.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 412 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510
G +Y G+ L++GN++P+ +P G+ + N+E
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIE 141
>UniRef50_Q21305 Cluster: Sox (Mammalian sry box) family protein 2,
isoform a; n=3; Caenorhabditis|Rep: Sox (Mammalian sry
box) family protein 2, isoform a - Caenorhabditis
elegans
Length = 283
Score = 33.1 bits (72), Expect = 8.2
Identities = 9/39 (23%), Positives = 27/39 (69%)
Frame = -1
Query: 567 SQWRSFQRHVPDDLYHPFSLKIAHNGTLRHSSNRHHISN 451
SQ+R++ H D + +P+S+++ H ++++ ++ H+++
Sbjct: 245 SQFRAYYDHTKDQMMYPYSIELTHAQNIQNALSQSHVTS 283
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 33.1 bits (72), Expect = 8.2
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = -3
Query: 679 RPPPA---TIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT--VAKFPEARARRP 527
R PP T+PT PL LDGRT +G LVR+A L +T + R RP
Sbjct: 3 REPPQSQETVPTSPLDLDGRTL---EGGGQLVRIAVALAALTGQAIRINHIRGNRP 55
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 33.1 bits (72), Expect = 8.2
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +1
Query: 394 SRRLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++ + G + + A ++VGN P+ +PEGT++ N+E K
Sbjct: 108 AKGMTVGMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELK 148
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 839,765,874
Number of Sequences: 1657284
Number of extensions: 17860948
Number of successful extensions: 47972
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 46037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47963
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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