BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdV30188 (792 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 12_02_0812 + 23383704-23384143,23384902-23385247 134 1e-31 06_01_0811 - 6113491-6113925,6114079-6114185,6114569-6114788,611... 33 0.26 11_06_0032 + 19432305-19432510,19433390-19434326,19434880-194349... 30 1.8 03_06_0376 + 33479776-33479958,33481055-33481236,33481345-334814... 30 1.8 06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26... 29 3.2 02_05_0812 + 31942591-31942758,31943415-31943491,31944169-319443... 29 5.6 02_05_0308 - 27754340-27754634,27755591-27755696,27755781-277558... 29 5.6 10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 28 9.8 03_03_0268 + 16047211-16047213,16047349-16047547,16047681-16047922 28 9.8 02_05_0634 + 30513920-30514136,30514674-30514717,30515547-305155... 28 9.8 >12_02_0812 + 23383704-23384143,23384902-23385247 Length = 261 Score = 134 bits (323), Expect = 1e-31 Identities = 59/83 (71%), Positives = 70/83 (84%) Frame = +3 Query: 516 MGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 695 +GDRG ARASG++A VI HNPD +R+KLPSGAKK++PSS R M+G VAGGGR +KP+ Sbjct: 120 VGDRGVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPM 179 Query: 696 LKAGRAYHKYKVKRNCWPYVRGV 764 LKAG AYHKY+VKRNCWP VRGV Sbjct: 180 LKAGNAYHKYRVKRNCWPKVRGV 202 Score = 82.2 bits (194), Expect = 4e-16 Identities = 35/50 (70%), Positives = 43/50 (86%) Frame = +2 Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403 LD+ ER+GY+KGVV DIIHDPGRGAPLA V FR P+++K +KELF+A EG Sbjct: 32 LDFGERNGYLKGVVTDIIHDPGRGAPLAKVTFRHPFRYKHQKELFVAAEG 81 Score = 64.9 bits (151), Expect = 7e-11 Identities = 23/36 (63%), Positives = 33/36 (91%) Frame = +1 Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 510 +YTGQFVYCG++ATL +GNV+P+ ++PEG +VCN+E Sbjct: 82 MYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVE 117 Score = 50.8 bits (116), Expect = 1e-06 Identities = 24/31 (77%), Positives = 25/31 (80%) Frame = +3 Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254 MGRVIRAQRKGAGSVF SHT RKG + RS Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPARFRS 31 >06_01_0811 - 6113491-6113925,6114079-6114185,6114569-6114788, 6115112-6115199,6115301-6115431,6115924-6116099, 6116465-6116529,6117014-6117094,6117219-6117358, 6117446-6117532,6117614-6117827,6118102-6118260, 6118860-6118936,6119629-6119796 Length = 715 Score = 33.1 bits (72), Expect = 0.26 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 668 WRWTY*QTYFESWKGIPQVQG 730 W WTY T+F SW +P +QG Sbjct: 70 WSWTYWSTFFLSWSIVPTLQG 90 >11_06_0032 + 19432305-19432510,19433390-19434326,19434880-19434975, 19435518-19435654,19435888-19436056 Length = 514 Score = 30.3 bits (65), Expect = 1.8 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 4/48 (8%) Frame = -2 Query: 776 QGSWHTTYIWPAVTFDLVLVVC----PSSFQNRFVNTSTSSNNTDHAS 645 Q +W T W + F L+LV+C PS R+ + ++++ D S Sbjct: 427 QSAWIITAFWDVLAFVLLLVICYLWAPSQSSQRYAYSGEAADDDDEES 474 >03_06_0376 + 33479776-33479958,33481055-33481236,33481345-33481469, 33481858-33482057,33482629-33482762,33483095-33483158, 33483764-33484441,33484723-33484839 Length = 560 Score = 30.3 bits (65), Expect = 1.8 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -2 Query: 158 YDPSLKDFIKSN*LNVGLSFSLYISYPVIKFKD 60 YD L D K+ L + LS +Y+ PVIKFKD Sbjct: 366 YDCILDDETKNIFLPIHLSEEVYVGDPVIKFKD 398 >06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-268460, 268779-268843,268854-269073,269163-269438,269547-269663, 269776-269853,269930-270184,270235-270323,270403-270816 Length = 865 Score = 29.5 bits (63), Expect = 3.2 Identities = 9/10 (90%), Positives = 9/10 (90%) Frame = +2 Query: 545 LWKLRHCDWT 574 LWK RHCDWT Sbjct: 73 LWKCRHCDWT 82 >02_05_0812 + 31942591-31942758,31943415-31943491,31944169-31944327, 31944559-31944772,31944849-31944935,31945022-31945161, 31945380-31945460,31945948-31946012,31946219-31946394, 31947212-31947342,31947438-31947525,31947671-31947884, 31948206-31948312,31948456-31948953 Length = 734 Score = 28.7 bits (61), Expect = 5.6 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 668 WRWTY*QTYFESWKGIPQVQG 730 W W+Y T+ +W +P +QG Sbjct: 70 WSWSYWSTFILTWAVVPTIQG 90 >02_05_0308 - 27754340-27754634,27755591-27755696,27755781-27755855, 27756039-27757410 Length = 615 Score = 28.7 bits (61), Expect = 5.6 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -2 Query: 545 GTCQTTSITHFLSRLHTMVPSGIAPTGITFPTSRVAFF 432 G C+ + L L MV SGIAPT T+ FF Sbjct: 208 GWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFF 245 >10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695, 3384640-3384709,3385878-3386002,3387128-3387268, 3387362-3387519,3387644-3387803,3390136-3390213, 3390326-3390385,3390473-3390528,3391886-3392090, 3394107-3394192,3394296-3394406,3394536-3394607, 3395453-3395538,3395730-3395878,3396107-3396250, 3396335-3396442,3396997-3397027,3397609-3397713, 3398283-3398407,3398807-3398950,3399073-3399177, 3400748-3400799,3401549-3401696,3401936-3402130, 3402404-3402647,3403152-3403259,3403887-3404034, 3405467-3405525,3405876-3405945,3407008-3407333, 3407666-3409204,3410526-3410733,3410870-3410906, 3411024-3411072,3411143-3411271 Length = 2025 Score = 27.9 bits (59), Expect = 9.8 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 11/94 (11%) Frame = -2 Query: 713 CPSSFQNRFVNTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSIRIV----SNHSGEVSR 546 CPS ++ +++T + +H S +QN L R + SC IR++ S +G +S Sbjct: 1100 CPSDIVLKWFDSTTMEDLVNHLSSNGYQNDLLHRAKVASCLCIIRLLTKLSSGDTGSLSF 1159 Query: 545 GTCQ-----TTSITHFLSRLHTMVPSG--IAPTG 465 + ++ +TH + T++ G IA TG Sbjct: 1160 SLVKKIQLISSKLTHMCAGARTLLCGGPRIASTG 1193 >03_03_0268 + 16047211-16047213,16047349-16047547,16047681-16047922 Length = 147 Score = 27.9 bits (59), Expect = 9.8 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +3 Query: 576 NPDAKRTRVKLPS--GAKKVLPSSNRGMVGIVAGGGRIDKPI 695 +P + RTR PS GA K ++ +G+ GG R+ PI Sbjct: 45 SPTSTRTRTSTPSAPGAAKAASPNHVRAIGVREGGARLVGPI 86 >02_05_0634 + 30513920-30514136,30514674-30514717,30515547-30515595, 30515663-30515835 Length = 160 Score = 27.9 bits (59), Expect = 9.8 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -3 Query: 142 KIL*NLINST*D*AFRYIFHIRL*NLKTVYFDLI 41 K+ N++ S + YIFH + NLK VY+ L+ Sbjct: 127 KLSINVLQSNTERPVYYIFHFLVHNLKAVYYGLV 160 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,711,440 Number of Sequences: 37544 Number of extensions: 496530 Number of successful extensions: 1261 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 1220 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1261 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2138915688 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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