Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30188
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 156 7e-38
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 156 7e-38
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 156 7e-38
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 156 7e-38
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 156 7e-38
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 156 7e-38
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 156 7e-38
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 156 7e-38
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 156 7e-38
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 93 8e-19
BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,... 31 4.8
AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor ... 31 4.8
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 8.3
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 70.1 bits (164), Expect = 8e-12
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 70.1 bits (164), Expect = 8e-12
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 70.1 bits (164), Expect = 8e-12
Identities = 30/38 (78%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 72 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 131
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 132 PILKAGRAYHKYKAKRNCWPRVRGV 156
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 36 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 73
Score = 64.5 bits (150), Expect = 4e-10
Identities = 29/35 (82%), Positives = 30/35 (85%)
Frame = +2
Query: 299 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 35
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 156 bits (379), Expect = 7e-38
Identities = 69/85 (81%), Positives = 78/85 (91%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDK 689
EK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDK
Sbjct: 118 EKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDK 177
Query: 690 PILKAGRAYHKYKVKRNCWPYVRGV 764
PILKAGRAYHKYK KRNCWP VRGV
Sbjct: 178 PILKAGRAYHKYKAKRNCWPRVRGV 202
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 32 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 81
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 82 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 119
Score = 50.4 bits (115), Expect = 7e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 162 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRS 254
MGRVIR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRA 31
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 93.5 bits (222), Expect = 8e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +2
Query: 254 LDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 403
+D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG
Sbjct: 28 VDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEG 77
Score = 69.7 bits (163), Expect = 1e-11
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 403 LYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLERK 516
++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LE K
Sbjct: 78 IHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEK 115
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 174 IRAQRKGAGSVFVSHTKKRKGAPKLRS 254
IR QRKGAGSVF +H K RKGA +LR+
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRA 27
Score = 33.5 bits (73), Expect = 0.89
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +3
Query: 510 EKMGDRGRLARASGNFA 560
EK GDRG+LARASGN+A
Sbjct: 114 EKPGDRGKLARASGNYA 130
>BC071733-1|AAH71733.1| 457|Homo sapiens retinoic acid receptor,
alpha protein.
Length = 457
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 408 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 283
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>AF283809-1|AAF87249.1| 54|Homo sapiens retinoic acid receptor
alpha 2 isoform protein.
Length = 54
Score = 31.1 bits (67), Expect = 4.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 408 VEPSGAMKSSFLVLNLYG-SRKCTTA-KGAPLPGSWIISLTTPL 283
VE G + FLV++ Y +R C KG P PG + L TPL
Sbjct: 5 VEVGGPTPNPFLVVDFYNQNRACLLPEKGLPAPGPYSTPLRTPL 48
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 8.3
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 739 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 644
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,893,821
Number of Sequences: 237096
Number of extensions: 2776637
Number of successful extensions: 5849
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5849
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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