Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30187
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   4.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   4.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   6.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.0  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 235 TSKMYVVVGLSEDGRV 282
           T  +Y  VGL EDG V
Sbjct: 52  THILYAFVGLREDGSV 67


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 235 TSKMYVVVGLSEDGRV 282
           T  +Y  VGL EDG V
Sbjct: 52  THILYAFVGLREDGSV 67


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 17/69 (24%), Positives = 26/69 (37%)
 Frame = -2

Query: 323 VYHLSLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRLLA 144
           ++H +      N Q      SPT +  L+ S    V  +   I     A++   + RL  
Sbjct: 29  IHHGATPPQSPNQQYTKDCSSPTPSDKLNTSTTSSVNVNDQNIRRYRTAFTREQLARLEK 88

Query: 143 EHFLGQYKS 117
           E F   Y S
Sbjct: 89  EFFKENYVS 97


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 121 LYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAAD 234
           ++C     AS  +        +Q+ ++ VDPAT +  D
Sbjct: 298 VFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEID 335


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 121 LYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAAD 234
           ++C     AS  +        +Q+ ++ VDPAT +  D
Sbjct: 298 VFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEID 335


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 121 LYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAAD 234
           ++C     AS  +        +Q+ ++ VDPAT +  D
Sbjct: 298 VFCDCSHQASLNIARRVQVTLLQVNLSQVDPATRKEID 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,421
Number of Sequences: 336
Number of extensions: 1061
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)