Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30187
(402 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 84 1e-16
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 84 1e-16
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 84 1e-16
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 84 1e-16
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 84 1e-16
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 84 1e-16
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 84 1e-16
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 84 1e-16
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 73 3e-13
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 73 3e-13
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 69 6e-12
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 44 3e-04
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAK 331
+MGESDD I+RL K DGI++K
Sbjct: 61 RMGESDDSILRLAKADGIVSK 81
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/57 (66%), Positives = 44/57 (77%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 57
Score = 37.5 bits (83), Expect = 0.017
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDD I+RL K DGI++KN+
Sbjct: 61 RMGESDDSILRLAKADGIVSKNF 83
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 73.3 bits (172), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 225
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 73.3 bits (172), Expect = 3e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 225
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 68.9 bits (161), Expect = 6e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 201
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 151 NRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
NR+I AKDHAS+Q+ +A+VD TGR K Y + G
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICG 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,563,784
Number of Sequences: 237096
Number of extensions: 690809
Number of successful extensions: 1762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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