BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30187
(402 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT030210-1|ABN49349.1| 158|Drosophila melanogaster IP18075p pro... 95 4e-20
BT015189-1|AAT94418.1| 83|Drosophila melanogaster RH57501p pro... 94 5e-20
AJ009557-1|CAA08751.1| 83|Drosophila melanogaster ribosomal pr... 94 5e-20
AE014134-497|AAN10394.1| 83|Drosophila melanogaster CG2986-PD,... 94 5e-20
AE014134-496|AAN10393.1| 83|Drosophila melanogaster CG2986-PC,... 94 5e-20
AE014134-495|AAN10392.1| 83|Drosophila melanogaster CG2986-PB,... 94 5e-20
AE014134-494|AAF51191.1| 83|Drosophila melanogaster CG2986-PA,... 94 5e-20
U37018-1|AAC46920.1| 1389|Drosophila melanogaster TIM protein. 28 4.1
BT024951-1|ABE01181.1| 492|Drosophila melanogaster IP15834p pro... 28 4.1
AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinate... 28 4.1
AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p pro... 28 4.1
AF032401-1|AAB94890.1| 1398|Drosophila melanogaster circadian cl... 28 4.1
AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA... 28 4.1
AE014134-618|AAF51098.4| 1398|Drosophila melanogaster CG3234-PB,... 28 4.1
AE014134-617|AAN10371.2| 1421|Drosophila melanogaster CG3234-PD,... 28 4.1
AE014134-616|AAF51097.1| 1389|Drosophila melanogaster CG3234-PA,... 28 4.1
M63449-1|AAA29050.1| 1060|Drosophila melanogaster zinc-finger ho... 28 5.4
BT001424-1|AAN71179.1| 184|Drosophila melanogaster GH14711p pro... 28 5.4
AE014297-4661|AAN14258.2| 859|Drosophila melanogaster CG1322-PC... 28 5.4
AE014297-4660|AAF57083.1| 1054|Drosophila melanogaster CG1322-PB... 28 5.4
BT011080-1|AAR82746.1| 1025|Drosophila melanogaster SD01785p pro... 27 7.1
BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p pro... 27 7.1
AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-P... 27 7.1
>BT030210-1|ABN49349.1| 158|Drosophila melanogaster IP18075p
protein.
Length = 158
Score = 94.7 bits (225), Expect = 4e-20
Identities = 43/57 (75%), Positives = 47/57 (82%)
Frame = +1
Query: 85 DKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVV 255
+KM+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK Y +
Sbjct: 15 NKMENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAI 71
>BT015189-1|AAT94418.1| 83|Drosophila melanogaster RH57501p
protein.
Length = 83
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK Y + G
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICG 57
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDDCIVRL KKDGI+ KN+
Sbjct: 61 RMGESDDCIVRLAKKDGIITKNF 83
>AJ009557-1|CAA08751.1| 83|Drosophila melanogaster ribosomal
protein S21 protein.
Length = 83
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK Y + G
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICG 57
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDDCIVRL KKDGI+ KN+
Sbjct: 61 RMGESDDCIVRLAKKDGIITKNF 83
>AE014134-497|AAN10394.1| 83|Drosophila melanogaster CG2986-PD,
isoform D protein.
Length = 83
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK Y + G
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICG 57
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDDCIVRL KKDGI+ KN+
Sbjct: 61 RMGESDDCIVRLAKKDGIITKNF 83
>AE014134-496|AAN10393.1| 83|Drosophila melanogaster CG2986-PC,
isoform C protein.
Length = 83
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK Y + G
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICG 57
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDDCIVRL KKDGI+ KN+
Sbjct: 61 RMGESDDCIVRLAKKDGIITKNF 83
>AE014134-495|AAN10392.1| 83|Drosophila melanogaster CG2986-PB,
isoform B protein.
Length = 83
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK Y + G
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICG 57
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDDCIVRL KKDGI+ KN+
Sbjct: 61 RMGESDDCIVRLAKKDGIITKNF 83
>AE014134-494|AAF51191.1| 83|Drosophila melanogaster CG2986-PA,
isoform A protein.
Length = 83
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/57 (75%), Positives = 46/57 (80%)
Frame = +1
Query: 91 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVVG 261
M+NDAGE VDLY PRKCSASNR+IHAKDHASVQL I DVDP TGR D SK Y + G
Sbjct: 1 MENDAGENVDLYVPRKCSASNRIIHAKDHASVQLSIVDVDPETGRQTDGSKTYAICG 57
Score = 45.2 bits (102), Expect = 3e-05
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 269 KMGESDDCIVRLTKKDGILAKNY 337
+MGESDDCIVRL KKDGI+ KN+
Sbjct: 61 RMGESDDCIVRLAKKDGIITKNF 83
>U37018-1|AAC46920.1| 1389|Drosophila melanogaster TIM protein.
Length = 1389
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSD-----SPTTTYILDVSAARPVAGSTS--AITSCTEAWSLAWMRRL 150
++ S+CNH+T PS D ++T + D + ++ +TS A TS + +
Sbjct: 1205 VMRSKCNHRTGPSGDPSDCVGSSSTTVDDEGFGKSISAATSQAASTSMSTVNPTTTLSLN 1264
Query: 149 LAEHFLGQYKSTNSPASFC 93
+ F+G + + NS +S C
Sbjct: 1265 MLNTFMGSH-NENSSSSGC 1282
>BT024951-1|ABE01181.1| 492|Drosophila melanogaster IP15834p
protein.
Length = 492
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSD-----SPTTTYILDVSAARPVAGSTS--AITSCTEAWSLAWMRRL 150
++ S+CNH+T PS D ++T + D + ++ +TS A TS + +
Sbjct: 308 VMRSKCNHRTGPSGDPSDCIGSSSTTVDDEGFGKSISAATSQAASTSMSTVNPTTTLSLN 367
Query: 149 LAEHFLGQYKSTNSPASFC 93
+ F+G + + NS +S C
Sbjct: 368 MLNTFMGSH-NENSSSSGC 385
>AY748349-1|AAU89434.1| 1386|Drosophila melanogaster uncoordinated
protein.
Length = 1386
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -2
Query: 323 VYHLSLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRL 150
V+HL + TS + TLP S L +SA A +A +S ++S A+ +R+
Sbjct: 1327 VHHLDVSTSSSSQSTLPGRSSGEAFEDLVMSAVADGARRRNAESSTEVSYSQAFWKRI 1384
>AY118608-1|AAM49977.1| 1228|Drosophila melanogaster LP08350p protein.
Length = 1228
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -2
Query: 323 VYHLSLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRL 150
V+HL + TS + TLP S L +SA A +A +S ++S A+ +R+
Sbjct: 1169 VHHLDVSTSSSSQSTLPGRSSGEAFEDLVMSAVADGARRRNAESSTEVSYSQAFWKRI 1226
>AF032401-1|AAB94890.1| 1398|Drosophila melanogaster circadian clock
protein protein.
Length = 1398
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSD-----SPTTTYILDVSAARPVAGSTS--AITSCTEAWSLAWMRRL 150
++ S+CNH+T PS D ++T + D + ++ +TS A TS + +
Sbjct: 1214 VMRSKCNHRTGPSGDPSDCVGSSSTTVDDEGFGKSISAATSQAASTSMSTVNPTTTLSLN 1273
Query: 149 LAEHFLGQYKSTNSPASFC 93
+ F+G + + NS +S C
Sbjct: 1274 MLNTFMGSH-NENSSSSGC 1291
>AE014298-3088|AAF50849.3| 1386|Drosophila melanogaster CG1501-PA
protein.
Length = 1386
Score = 28.3 bits (60), Expect = 4.1
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -2
Query: 323 VYHLSLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRL 150
V+HL + TS + TLP S L +SA A +A +S ++S A+ +R+
Sbjct: 1327 VHHLDVSTSSSSQSTLPGRSSGEAFEDLVMSAVADGARRRNAESSTEVSYSQAFWKRI 1384
>AE014134-618|AAF51098.4| 1398|Drosophila melanogaster CG3234-PB,
isoform B protein.
Length = 1398
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSD-----SPTTTYILDVSAARPVAGSTS--AITSCTEAWSLAWMRRL 150
++ S+CNH+T PS D ++T + D + ++ +TS A TS + +
Sbjct: 1214 VMRSKCNHRTGPSGDPSDCIGSSSTTVDDEGFGKSISAATSQAASTSMSTVNPTTTLSLN 1273
Query: 149 LAEHFLGQYKSTNSPASFC 93
+ F+G + + NS +S C
Sbjct: 1274 MLNTFMGSH-NENSSSSGC 1291
>AE014134-617|AAN10371.2| 1421|Drosophila melanogaster CG3234-PD,
isoform D protein.
Length = 1421
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSD-----SPTTTYILDVSAARPVAGSTS--AITSCTEAWSLAWMRRL 150
++ S+CNH+T PS D ++T + D + ++ +TS A TS + +
Sbjct: 1237 VMRSKCNHRTGPSGDPSDCIGSSSTTVDDEGFGKSISAATSQAASTSMSTVNPTTTLSLN 1296
Query: 149 LAEHFLGQYKSTNSPASFC 93
+ F+G + + NS +S C
Sbjct: 1297 MLNTFMGSH-NENSSSSGC 1314
>AE014134-616|AAF51097.1| 1389|Drosophila melanogaster CG3234-PA,
isoform A protein.
Length = 1389
Score = 28.3 bits (60), Expect = 4.1
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSD-----SPTTTYILDVSAARPVAGSTS--AITSCTEAWSLAWMRRL 150
++ S+CNH+T PS D ++T + D + ++ +TS A TS + +
Sbjct: 1205 VMRSKCNHRTGPSGDPSDCIGSSSTTVDDEGFGKSISAATSQAASTSMSTVNPTTTLSLN 1264
Query: 149 LAEHFLGQYKSTNSPASFC 93
+ F+G + + NS +S C
Sbjct: 1265 MLNTFMGSH-NENSSSSGC 1282
>M63449-1|AAA29050.1| 1060|Drosophila melanogaster zinc-finger
homeodomain protein 1 protein.
Length = 1060
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 311 SLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRLLAEHFL 132
SL ++ +H P +P ++ I D +P A + + + CT+ + L+EH
Sbjct: 35 SLASTLLHHNQSPKHSNPGSSGIQDAHPNQPGAAADAFLVKCTQCHKRFPEYQSLSEHIA 94
Query: 131 GQY 123
++
Sbjct: 95 SEH 97
>BT001424-1|AAN71179.1| 184|Drosophila melanogaster GH14711p
protein.
Length = 184
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Frame = -2
Query: 305 LTSRCNHQTLPSSD-----SPTTTYILDVSAARPVAGSTS--AITSCTEAWSLAWMRRLL 147
+ S+CNH+T PS D ++T + D + ++ +TS A TS + + +
Sbjct: 1 MRSKCNHRTGPSGDPSDCIGSSSTTVDDEGFGKSISAATSQAASTSMSTVNPTTTLSLNM 60
Query: 146 AEHFLGQYKSTNSPASFC 93
F+G + + NS +S C
Sbjct: 61 LNTFMGSH-NENSSSSGC 77
>AE014297-4661|AAN14258.2| 859|Drosophila melanogaster CG1322-PC,
isoform C protein.
Length = 859
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 311 SLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRLLAEHFL 132
SL ++ +H P +P ++ I D +P A + + + CT+ + L+EH
Sbjct: 35 SLASTLLHHNQSPKHSNPGSSGIQDAHPNQPGAAADAFLVKCTQCHKRFPEYQSLSEHIA 94
Query: 131 GQY 123
++
Sbjct: 95 SEH 97
>AE014297-4660|AAF57083.1| 1054|Drosophila melanogaster CG1322-PB,
isoform B protein.
Length = 1054
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 311 SLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRLLAEHFL 132
SL ++ +H P +P ++ I D +P A + + + CT+ + L+EH
Sbjct: 35 SLASTLLHHNQSPKHSNPGSSGIQDAHPNQPGAAADAFLVKCTQCHKRFPEYQSLSEHIA 94
Query: 131 GQY 123
++
Sbjct: 95 SEH 97
>BT011080-1|AAR82746.1| 1025|Drosophila melanogaster SD01785p
protein.
Length = 1025
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = -2
Query: 311 SLLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGSTSAITSCTEAWSLAWMRRLLAEHFL 132
SL ++ +H P +P ++ I D +P A + + + CT+ + L+EH
Sbjct: 6 SLASTLLHHNQSPKHSNPGSSGIQDAHPNQPGAAADAFLVKCTKCHKRFPEYQSLSEHIA 65
Query: 131 GQY 123
++
Sbjct: 66 SEH 68
>BT003589-1|AAO39592.1| 796|Drosophila melanogaster LD03662p
protein.
Length = 796
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGST--SAITSCTEA 177
+L N + P + +TT++++ S P AGS S+ TSC++A
Sbjct: 696 VLLEFANSKQPPPLAASSTTFVVNASVGFPSAGSVFASSSTSCSKA 741
>AE014297-2554|AAF55575.2| 1784|Drosophila melanogaster CG31224-PA
protein.
Length = 1784
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 308 LLTSRCNHQTLPSSDSPTTTYILDVSAARPVAGST--SAITSCTEA 177
+L N + P + +TT++++ S P AGS S+ TSC++A
Sbjct: 870 VLLEFANSKQPPPLAASSTTFVVNASVGFPSAGSVFASSSTSCSKA 915
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,752,321
Number of Sequences: 53049
Number of extensions: 215978
Number of successful extensions: 711
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -