Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30186
(422 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 136 1e-31
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 123 1e-27
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 122 4e-27
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 108 5e-23
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 107 7e-23
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 102 3e-21
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 100 2e-20
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 92 4e-18
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 89 5e-17
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 81 1e-14
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 80 2e-14
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 73 3e-12
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 72 4e-12
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 69 4e-11
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 66 4e-10
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 61 1e-08
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 60 2e-08
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 58 6e-08
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 55 5e-07
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 50 3e-05
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 49 5e-05
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 47 2e-04
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 44 0.002
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 42 0.004
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo... 42 0.005
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 40 0.016
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 40 0.016
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 40 0.016
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 40 0.021
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 39 0.037
UniRef50_Q8ZTU2 Cluster: 50S ribosomal protein L31e; n=4; Pyroba... 38 0.064
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.085
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha... 35 0.60
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 33 2.4
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 33 2.4
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 3.2
UniRef50_A7PUP2 Cluster: Chromosome chr7 scaffold_31, whole geno... 32 4.2
UniRef50_A6XS34 Cluster: Putative uncharacterized protein; n=1; ... 31 7.4
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 136 bits (330), Expect = 1e-31
Identities = 62/72 (86%), Positives = 67/72 (93%)
Frame = +3
Query: 39 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
+K + + +VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+RVDTRLNK
Sbjct: 8 RKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNK 67
Query: 219 FLWSKGVRNVPF 254
FLWSKGVRNVPF
Sbjct: 68 FLWSKGVRNVPF 79
Score = 74.9 bits (176), Expect = 6e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +2
Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 388
NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE
Sbjct: 90 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
Score = 37.5 bits (83), Expect = 0.11
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 19 MAKPKGERKGKSAINELL 72
MAKPKGERKGKSAINE++
Sbjct: 1 MAKPKGERKGKSAINEVV 18
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 123 bits (297), Expect = 1e-27
Identities = 51/72 (70%), Positives = 65/72 (90%)
Frame = +3
Query: 39 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNK 218
KK + + +VTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK
Sbjct: 11 KKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNK 70
Query: 219 FLWSKGVRNVPF 254
+W+KG+RNVP+
Sbjct: 71 AVWAKGIRNVPY 82
Score = 50.4 bits (115), Expect = 1e-05
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
N+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 93 NEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 122 bits (293), Expect = 4e-27
Identities = 50/66 (75%), Positives = 62/66 (93%)
Frame = +3
Query: 57 HKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKG 236
H+R TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG
Sbjct: 55 HQRGSTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKG 114
Query: 237 VRNVPF 254
+RNVP+
Sbjct: 115 IRNVPY 120
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 108 bits (259), Expect = 5e-23
Identities = 45/63 (71%), Positives = 57/63 (90%)
Frame = +3
Query: 66 IVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRN 245
+VTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R+DTRLNK +WSKG+R+
Sbjct: 17 VVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVRIDTRLNKHIWSKGIRS 76
Query: 246 VPF 254
PF
Sbjct: 77 TPF 79
Score = 54.4 bits (125), Expect = 9e-07
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2
Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 388
NDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 90 NDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 107 bits (258), Expect = 7e-23
Identities = 47/76 (61%), Positives = 62/76 (81%)
Frame = +3
Query: 27 TQR*KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDT 206
T+ KK + + +VTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R+DT
Sbjct: 4 TKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVRIDT 63
Query: 207 RLNKFLWSKGVRNVPF 254
RLNK LW +G+RN PF
Sbjct: 64 RLNKALWHRGIRNPPF 79
Score = 55.2 bits (127), Expect = 5e-07
Identities = 23/35 (65%), Positives = 32/35 (91%)
Frame = +2
Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 388
NDDEDS +KL+TLVTYVPV++ K LQTENV+++++
Sbjct: 90 NDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 102 bits (245), Expect = 3e-21
Identities = 43/64 (67%), Positives = 54/64 (84%)
Frame = +3
Query: 60 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGV 239
+ ++TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LNK +WSKG+
Sbjct: 9 EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGI 68
Query: 240 RNVP 251
R P
Sbjct: 69 RGPP 72
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 99.5 bits (237), Expect = 2e-20
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = +3
Query: 12 DNNG*TQR*KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD 191
D+ +Q+ KK + + +VTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D
Sbjct: 51 DHKDKSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKD 110
Query: 192 IRVDTRLNKFLWSKGVRNVP 251
+R+D +LN+ +W GV+N P
Sbjct: 111 VRLDPKLNQEVWKYGVKNFP 130
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 92.3 bits (219), Expect = 4e-18
Identities = 43/77 (55%), Positives = 58/77 (75%)
Frame = +3
Query: 69 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 248
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W+KG NV
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 249 PFVSV*GFHEDVMMMKI 299
+V + GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 31.9 bits (69), Expect = 5.6
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2
Query: 305 HKLFTLVTYVPVASIKGL 358
HKL+TL+TYVPV + K L
Sbjct: 101 HKLYTLITYVPVTTFKNL 118
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 88.6 bits (210), Expect = 5e-17
Identities = 36/56 (64%), Positives = 46/56 (82%)
Frame = +3
Query: 84 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS G+RN+P
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIP 67
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 80.6 bits (190), Expect = 1e-14
Identities = 34/48 (70%), Positives = 42/48 (87%)
Frame = +3
Query: 60 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 203
+ ++TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 9 EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 79.8 bits (188), Expect = 2e-14
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +3
Query: 42 KRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKF 221
K+Q + T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF
Sbjct: 29 KKQKKTLKPSTKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKF 88
Query: 222 LWSKGVRNVP 251
+WSKG+RN P
Sbjct: 89 IWSKGIRNPP 98
Score = 33.9 bits (74), Expect = 1.4
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTE 367
N+DEDS +++TLV +V V S KGL E
Sbjct: 110 NEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 72.5 bits (170), Expect = 3e-12
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = +3
Query: 69 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 248
+TRE T+++HK LH FKKRAP+AIK IR A K M T +++ D LN+F+WS+G+R+V
Sbjct: 46 ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTHNVKFDMGLNQFIWSQGIRSV 105
Score = 36.3 bits (80), Expect = 0.26
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 293 EDSAHKLFTLVTYVPVASIKGLQTENVDASQ 385
E K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 119 EGEEGKFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 72.1 bits (169), Expect = 4e-12
Identities = 28/44 (63%), Positives = 39/44 (88%)
Frame = +3
Query: 123 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPF 254
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W+KG+RNVP+
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVPY 132
Score = 51.2 bits (117), Expect = 8e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
N+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 143 NEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +3
Query: 39 KKRQISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDT 206
KK + +VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ + T
Sbjct: 10 KKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVICT 65
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 65.7 bits (153), Expect = 4e-10
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 141 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPF 254
A IRKFA K+MGTPD+R+DTRLNK +WSKGVRNVP+
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVPY 48
Score = 52.4 bits (120), Expect = 4e-06
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +2
Query: 284 NDDEDSAHKLFTLVTYVPVASIKGLQTENVD 376
N+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 59 NEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 60.9 bits (141), Expect = 1e-08
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = +3
Query: 69 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 248
V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN ++W KGV+ V
Sbjct: 84 VSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHKGVKGV 143
Query: 249 P 251
P
Sbjct: 144 P 144
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 60.1 bits (139), Expect = 2e-08
Identities = 35/60 (58%), Positives = 38/60 (63%)
Frame = -2
Query: 247 TFLTPLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVT 68
T LT L Q F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVT
Sbjct: 17 TPLTLLFQIAWFNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVT 76
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 58.4 bits (135), Expect = 6e-08
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 69 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 248
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WS+G+R+V
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62
Query: 249 P 251
P
Sbjct: 63 P 63
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 55.2 bits (127), Expect = 5e-07
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +3
Query: 117 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRN 245
GF++ P +KEIRKFA K+MGTPD+ +D NK + ++G+RN
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRN 91
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 49.6 bits (113), Expect = 3e-05
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = +3
Query: 75 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W +G++ P
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPP 67
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 48.8 bits (111), Expect = 5e-05
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +3
Query: 90 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S G N P
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPP 68
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +3
Query: 78 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
EYTVNL K + KR +A+K +++F + +++ LNKF+W +G R P
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPP 59
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGVRNVP 251
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS + P
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPP 67
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 42.3 bits (95), Expect = 0.004
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 81 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W +G+ P
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPP 67
>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
Ostreococcus tauri
Length = 95
Score = 41.9 bits (94), Expect = 0.005
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +3
Query: 177 MGTPDIRVDTRLNKFLWSKGVRNVPF 254
M T D+R+D +LNK +WSKG+RNV F
Sbjct: 1 MKTSDVRIDVKLNKAVWSKGIRNVRF 26
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 40.3 bits (90), Expect = 0.016
Identities = 21/59 (35%), Positives = 34/59 (57%)
Frame = +3
Query: 75 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W +G+++ P
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPP 64
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 40.3 bits (90), Expect = 0.016
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 81 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGVRNVP 251
YT+ L + + V KRA RA+KE+R F + M T +++D +N+ LW KG P
Sbjct: 15 YTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINECLWEKGCEKPP 72
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 40.3 bits (90), Expect = 0.016
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSK 233
K +V R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W +
Sbjct: 3 KVVVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWER 62
Query: 234 GVRNVP 251
G P
Sbjct: 63 GAEKPP 68
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 39.9 bits (89), Expect = 0.021
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +3
Query: 123 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
KKR + + A K M T D+R+D LN+ +W++G+RN+P
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLP 328
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 39.1 bits (87), Expect = 0.037
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +3
Query: 81 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 251
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WS+ P
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPP 64
>UniRef50_Q8ZTU2 Cluster: 50S ribosomal protein L31e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L31e -
Pyrobaculum aerophilum
Length = 91
Score = 38.3 bits (85), Expect = 0.064
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +3
Query: 60 KRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD--IRVDTRLNKFLWSK 233
K +++REY +NL +R + V KRA A+ IR+F + + +++ LN LW++
Sbjct: 6 KVVLSREYVINL-RRAYEVSRTKRAKYAVGLIRRFVARHLKVEPKAVKIGQLLNTALWAR 64
Query: 234 GVRNVP 251
+ P
Sbjct: 65 SIEKPP 70
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 37.9 bits (84), Expect = 0.085
Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%)
Frame = +3
Query: 39 KKRQISHKR--IVTREYTVNLHKRLHG 113
KKR ++ +VTREYT+NLHKRLHG
Sbjct: 4 KKRGAGTRKDEVVTREYTINLHKRLHG 30
>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
- Encephalitozoon cuniculi
Length = 111
Score = 35.1 bits (77), Expect = 0.60
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 72 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLWSKGVRNV 248
T E TVNL + + + K+A + ++ +++ +K + V LN FL+S+G++ +
Sbjct: 10 TVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLYSRGIKKI 69
Query: 249 P 251
P
Sbjct: 70 P 70
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 33.1 bits (72), Expect = 2.4
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 290 DEDSAHKLFTLVTYVPVASIKGLQTENV 373
DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 103 DEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 33.1 bits (72), Expect = 2.4
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 51 ISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLW 227
+S + +TR V KR++ RA RA++ IRK+ + + I +D +N+++W
Sbjct: 1 MSEEGKITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVW 60
Query: 228 SKGVRNVP 251
S+ P
Sbjct: 61 SRSREKPP 68
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 3.2
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +3
Query: 81 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 230
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_A7PUP2 Cluster: Chromosome chr7 scaffold_31, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr7 scaffold_31, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 1011
Score = 32.3 bits (70), Expect = 4.2
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +3
Query: 48 QISHKRIVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAE 170
+IS +R + TV KRL GVG +KR A+ E+R+FA+
Sbjct: 724 RISSERFSSIRPTVWRLKRLMGVGSEKRLKLAVGEVREFAK 764
>UniRef50_A6XS34 Cluster: Putative uncharacterized protein; n=1;
Vibrio cholerae AM-19226|Rep: Putative uncharacterized
protein - Vibrio cholerae AM-19226
Length = 663
Score = 31.5 bits (68), Expect = 7.4
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -1
Query: 302 RNLHHHYVFVKASHGHEGNISDSLRPKEFV*AGVYSNVRSSHLFFSELSDFFDCSW---G 132
RNL + Y +A IS R K+ A Y+++ +SHL+F ++S + +W G
Sbjct: 552 RNLKYKYGVDEARKMFVAIISPPSRQKQLE-AMSYNDIFTSHLYFQDISKVIEKNWQDFG 610
Query: 131 TLFKSN 114
++FK +
Sbjct: 611 SIFKGD 616
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,190,272
Number of Sequences: 1657284
Number of extensions: 6546601
Number of successful extensions: 13914
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 13690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13913
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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