Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30183
         (661 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical pr...    98   6e-21
U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin pro...    98   6e-21

>Z81525-1|CAB04256.1|  897|Caenorhabditis elegans Hypothetical
           protein F33A8.1 protein.
          Length = 897

 Score = 97.9 bits (233), Expect = 6e-21
 Identities = 43/84 (51%), Positives = 60/84 (71%)
 Frame = +1

Query: 253 QRGFKRNDKSICISSASFIAHLVNQRVAHEIXXXXXXXXXVESPTDDSVEVAIAFLKECG 432
           +R F+RND+ + ++   FIAHL+NQ+VAHE+         +E PTDDSVEVAIAFLKECG
Sbjct: 273 KRSFRRNDRGVTVNVIKFIAHLINQQVAHEVLALEIMILMLEEPTDDSVEVAIAFLKECG 332

Query: 433 QKLTEVSSKGVNAIFEMLRNILHE 504
            KL E++   +N++++ LR IL E
Sbjct: 333 AKLLEIAPAALNSVYDRLRAILME 356



 Score = 97.5 bits (232), Expect = 7e-21
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 5   WEALKKSXXXXXXXXXXXXXXXXXXELLKENIVRGRGLLCRSVIQAQAASPTFTNVYAAL 184
           WE +KK                   ELL+EN++R +GLLCR +IQAQA SP F+NVYAAL
Sbjct: 190 WERMKKKIHGLVNRVNAKNLVQIVRELLQENVIRSKGLLCRDIIQAQAFSPGFSNVYAAL 249

Query: 185 VSAVNSRFPNIGELLLKRLVIQFK 256
            + +NS+FP++GELLL+RL++QFK
Sbjct: 250 AAVINSKFPHVGELLLRRLIVQFK 273



 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 507 SLDQRVPYLIEVMFQVWKDGFKDHPAXXXXXXXXXXXXQFTHPID 641
           +LD+R+ Y+IE   Q+ KD F  +PA            Q  H ++
Sbjct: 363 ALDRRIQYMIETAMQIRKDKFAAYPAVIEDLDLIEEEDQIIHTLN 407


>U19615-1|AAB51351.1|  897|Caenorhabditis elegans Nucampholin
           protein.
          Length = 897

 Score = 97.9 bits (233), Expect = 6e-21
 Identities = 43/84 (51%), Positives = 60/84 (71%)
 Frame = +1

Query: 253 QRGFKRNDKSICISSASFIAHLVNQRVAHEIXXXXXXXXXVESPTDDSVEVAIAFLKECG 432
           +R F+RND+ + ++   FIAHL+NQ+VAHE+         +E PTDDSVEVAIAFLKECG
Sbjct: 273 KRSFRRNDRGVTVNVIKFIAHLINQQVAHEVLALEIMILMLEEPTDDSVEVAIAFLKECG 332

Query: 433 QKLTEVSSKGVNAIFEMLRNILHE 504
            KL E++   +N++++ LR IL E
Sbjct: 333 AKLLEIAPAALNSVYDRLRAILME 356



 Score = 97.5 bits (232), Expect = 7e-21
 Identities = 43/84 (51%), Positives = 58/84 (69%)
 Frame = +2

Query: 5   WEALKKSXXXXXXXXXXXXXXXXXXELLKENIVRGRGLLCRSVIQAQAASPTFTNVYAAL 184
           WE +KK                   ELL+EN++R +GLLCR +IQAQA SP F+NVYAAL
Sbjct: 190 WERMKKKIHGLVNRVNAKNLVQIVRELLQENVIRSKGLLCRDIIQAQAFSPGFSNVYAAL 249

Query: 185 VSAVNSRFPNIGELLLKRLVIQFK 256
            + +NS+FP++GELLL+RL++QFK
Sbjct: 250 AAVINSKFPHVGELLLRRLIVQFK 273



 Score = 31.5 bits (68), Expect = 0.55
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 507 SLDQRVPYLIEVMFQVWKDGFKDHPAXXXXXXXXXXXXQFTHPID 641
           +LD+R+ Y+IE   Q+ KD F  +PA            Q  H ++
Sbjct: 363 ALDRRIQYMIETAMQIRKDKFAAYPAVIEDLDLIEEEDQIIHTLN 407


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,066,003
Number of Sequences: 27780
Number of extensions: 238768
Number of successful extensions: 506
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 506
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)